RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 ATP4AP20648 1035 aa20.96■□□□□ 0.95
CDC42EP1-201ENST00000249014 MDH1P40925 334 aaKnown RBP20.96■□□□□ 0.95
CDC42EP1-201ENST00000249014 GCNT1Q02742 428 aa20.96■□□□□ 0.95
CDC42EP1-201ENST00000249014 ZDHHC24Q6UX98 284 aa20.96■□□□□ 0.95
CDC42EP1-201ENST00000249014 CYFIP1Q7L576 1253 aa20.96■□□□□ 0.95
CDC42EP1-201ENST00000249014 MAGOHBQ96A72 148 aaKnown RBP20.96■□□□□ 0.95
CDC42EP1-201ENST00000249014 CDHR1Q96JP9 859 aa20.96■□□□□ 0.95
CDC42EP1-201ENST00000249014 UVRAGQ9P2Y5 699 aa20.96■□□□□ 0.95
CDC42EP1-201ENST00000249014 PCYOX1Q9UHG3 505 aa20.96■□□□□ 0.95
CDC42EP1-201ENST00000249014 C19orf81C9J6K1 198 aa20.95■□□□□ 0.94
CDC42EP1-201ENST00000249014 SUPT20HL2P0C7V6 817 aa20.95■□□□□ 0.94
CDC42EP1-201ENST00000249014 PLTPP55058 493 aa20.95■□□□□ 0.94
CDC42EP1-201ENST00000249014 FSTL1Q12841 308 aa20.95■□□□□ 0.94
CDC42EP1-201ENST00000249014 CLEC16AQ2KHT3 1053 aa20.95■□□□□ 0.94
CDC42EP1-201ENST00000249014 SUPT20HL1Q3ZLR7 823 aa20.95■□□□□ 0.94
CDC42EP1-201ENST00000249014 FBXO25Q8TCJ0 367 aa20.95■□□□□ 0.94
CDC42EP1-201ENST00000249014 EPB41L4BQ9H329 900 aa20.95■□□□□ 0.94
CDC42EP1-201ENST00000249014 GRHL1Q9NZI5 618 aa20.95■□□□□ 0.94
CDC42EP1-201ENST00000249014 CNOT8Q9UFF9 292 aaKnown RBP20.95■□□□□ 0.94
CDC42EP1-201ENST00000249014 LOC285556D6RIA3 1793 aa20.95■□□□□ 0.94
CDC42EP1-201ENST00000249014 DRG2P55039 364 aaKnown RBP20.95■□□□□ 0.94
CDC42EP1-201ENST00000249014 CORO7P57737 925 aa20.95■□□□□ 0.94
CDC42EP1-201ENST00000249014 EMC2Q15006 297 aa20.95■□□□□ 0.94
CDC42EP1-201ENST00000249014 SIX1Q15475 284 aaPredicted RBP20.95■□□□□ 0.94
CDC42EP1-201ENST00000249014 XKR3Q5GH77 459 aa20.95■□□□□ 0.94
CDC42EP1-201ENST00000249014 CCDC137Q6PK04 289 aaKnown RBP20.95■□□□□ 0.94
CDC42EP1-201ENST00000249014 RUFY4Q6ZNE9 571 aa20.95■□□□□ 0.94
CDC42EP1-201ENST00000249014 SLC13A5Q86YT5 568 aaPredicted RBP20.95■□□□□ 0.94
CDC42EP1-201ENST00000249014 TMEM143Q96AN5 459 aa20.95■□□□□ 0.94
CDC42EP1-201ENST00000249014 SPDYE16A6NNV3 312 aaPredicted RBP20.94■□□□□ 0.94
CDC42EP1-201ENST00000249014 EBAG9O00559 213 aa20.94■□□□□ 0.94
CDC42EP1-201ENST00000249014 NDUFAB1O14561 156 aa20.94■□□□□ 0.94
CDC42EP1-201ENST00000249014 EXTL3O43909 919 aa20.94■□□□□ 0.94
CDC42EP1-201ENST00000249014 GGPS1O95749 300 aa20.94■□□□□ 0.94
CDC42EP1-201ENST00000249014 LIG4P49917 911 aa20.94■□□□□ 0.94
CDC42EP1-201ENST00000249014 PPARDQ03181 441 aa20.94■□□□□ 0.94
CDC42EP1-201ENST00000249014 BIRC3Q13489 604 aa20.94■□□□□ 0.94
CDC42EP1-201ENST00000249014 GNPTABQ3T906 1256 aa20.94■□□□□ 0.94
CDC42EP1-201ENST00000249014 MIS18BP1Q6P0N0 1132 aa20.94■□□□□ 0.94
CDC42EP1-201ENST00000249014 KLRG1Q96E93 195 aa20.94■□□□□ 0.94
CDC42EP1-201ENST00000249014 HAPLN2Q9GZV7 340 aa20.94■□□□□ 0.94
CDC42EP1-201ENST00000249014 BCCIPQ9P287 314 aaKnown RBP eCLIP20.94■□□□□ 0.94
CDC42EP1-201ENST00000249014 DCDC2CA8MYV0 355 aa20.93■□□□□ 0.94
CDC42EP1-201ENST00000249014 STAM2O75886 525 aa20.93■□□□□ 0.94
CDC42EP1-201ENST00000249014 UNGP13051 313 aaPredicted RBP20.93■□□□□ 0.94
CDC42EP1-201ENST00000249014 RPL21P46778 160 aaKnown RBP20.93■□□□□ 0.94
CDC42EP1-201ENST00000249014 ACOT2P49753 483 aa20.93■□□□□ 0.94
CDC42EP1-201ENST00000249014 NLRP11P59045 1033 aaKnown RBP20.93■□□□□ 0.94
CDC42EP1-201ENST00000249014 CLDN10P78369 228 aa20.93■□□□□ 0.94
CDC42EP1-201ENST00000249014 ENPEPQ07075 957 aa20.93■□□□□ 0.94
CDC42EP1-201ENST00000249014 PTGISQ16647 500 aa20.93■□□□□ 0.94
CDC42EP1-201ENST00000249014 CYP1B1Q16678 543 aa20.93■□□□□ 0.94
CDC42EP1-201ENST00000249014 ENOSF1Q7L5Y1 443 aa20.93■□□□□ 0.94
CDC42EP1-201ENST00000249014 EPN3Q9H201 632 aa20.93■□□□□ 0.94
CDC42EP1-201ENST00000249014 C1orf112Q9NSG2 853 aa20.93■□□□□ 0.94
CDC42EP1-201ENST00000249014 RASAL2Q9UJF2 1139 aa20.93■□□□□ 0.94
CDC42EP1-201ENST00000249014 PTPRJQ12913 1337 aa20.93■□□□□ 0.94
CDC42EP1-201ENST00000249014 ZNF541Q9H0D2 1346 aa20.93■□□□□ 0.94
CDC42EP1-201ENST00000249014 ZC3H11AO75152 810 aaKnown RBP eCLIP20.93■□□□□ 0.94
CDC42EP1-201ENST00000249014 RARAP10276 462 aa20.93■□□□□ 0.94
CDC42EP1-201ENST00000249014 POLGP54098 1239 aaPredicted RBP20.93■□□□□ 0.94
CDC42EP1-201ENST00000249014 PSPC1Q8WXF1 523 aaKnown RBP20.93■□□□□ 0.94
CDC42EP1-201ENST00000249014 TRIM7Q9C029 511 aa20.93■□□□□ 0.94
CDC42EP1-201ENST00000249014 SIP14410 1827 aa20.93■□□□□ 0.94
CDC42EP1-201ENST00000249014 WDR90Q96KV7 1748 aa20.92■□□□□ 0.94
CDC42EP1-201ENST00000249014 PEX10O60683 326 aa20.92■□□□□ 0.94
CDC42EP1-201ENST00000249014 SEC24CP53992 1094 aa20.92■□□□□ 0.94
CDC42EP1-201ENST00000249014 PSMD6Q15008 389 aa20.92■□□□□ 0.94
CDC42EP1-201ENST00000249014 LLGL1Q15334 1064 aa20.92■□□□□ 0.94
CDC42EP1-201ENST00000249014 ZACNQ401N2 412 aa20.92■□□□□ 0.94
CDC42EP1-201ENST00000249014 SPDYCQ5MJ68 293 aa20.92■□□□□ 0.94
CDC42EP1-201ENST00000249014 AGBL2Q5U5Z8 902 aa20.92■□□□□ 0.94
CDC42EP1-201ENST00000249014 TDRD10Q5VZ19 366 aaKnown RBP20.92■□□□□ 0.94
CDC42EP1-201ENST00000249014 CRELD2Q6UXH1 353 aaPredicted RBP20.92■□□□□ 0.94
CDC42EP1-201ENST00000249014 TRPM4Q8TD43 1214 aa20.92■□□□□ 0.94
CDC42EP1-201ENST00000249014 ASAP3Q8TDY4 903 aa20.92■□□□□ 0.94
CDC42EP1-201ENST00000249014 SLC12A6Q9UHW9 1150 aa20.92■□□□□ 0.94
CDC42EP1-201ENST00000249014 NOVA2Q9UNW9 492 aaKnown RBP20.92■□□□□ 0.94
CDC42EP1-201ENST00000249014 MAFBQ9Y5Q3 323 aaPredicted RBP20.92■□□□□ 0.94
CDC42EP1-201ENST00000249014 SSC5DA1L4H1 1573 aa20.92■□□□□ 0.94
CDC42EP1-201ENST00000249014 MYPNQ86TC9 1320 aa20.92■□□□□ 0.94
CDC42EP1-201ENST00000249014 C4BPAP04003 597 aaKnown RBP20.92■□□□□ 0.94
CDC42EP1-201ENST00000249014 SHBGP04278 402 aa20.92■□□□□ 0.94
CDC42EP1-201ENST00000249014 RWDD2BP57060 319 aa20.92■□□□□ 0.94
CDC42EP1-201ENST00000249014 CNTN2Q02246 1040 aa20.92■□□□□ 0.94
CDC42EP1-201ENST00000249014 KRT71Q3SY84 523 aa20.92■□□□□ 0.94
CDC42EP1-201ENST00000249014 SPOPLQ6IQ16 392 aa20.92■□□□□ 0.94
CDC42EP1-201ENST00000249014 EFCAB13Q8IY85 973 aa20.92■□□□□ 0.94
CDC42EP1-201ENST00000249014 ZBTB45Q96K62 511 aaPredicted RBP20.92■□□□□ 0.94
CDC42EP1-201ENST00000249014 RASSF4Q9H2L5 321 aa20.92■□□□□ 0.94
CDC42EP1-201ENST00000249014 STYXL1Q9Y6J8 313 aa20.92■□□□□ 0.94
CDC42EP1-201ENST00000249014 H0YCG3 227 aa20.91■□□□□ 0.94
CDC42EP1-201ENST00000249014 HLA-DRAP01903 254 aa20.91■□□□□ 0.94
CDC42EP1-201ENST00000249014 TNNI1P19237 187 aa20.91■□□□□ 0.94
CDC42EP1-201ENST00000249014 GLRA2P23416 452 aa20.91■□□□□ 0.94
CDC42EP1-201ENST00000249014 COILP38432 576 aaPredicted RBP20.91■□□□□ 0.94
CDC42EP1-201ENST00000249014 KCNJ1P48048 391 aa20.91■□□□□ 0.94
CDC42EP1-201ENST00000249014 C2CD6Q53TS8 623 aa20.91■□□□□ 0.94
CDC42EP1-201ENST00000249014 PHLDB2Q86SQ0 1253 aa20.91■□□□□ 0.94
CDC42EP1-201ENST00000249014 APOBEC3FQ8IUX4 373 aaKnown RBP20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms