RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 GAS7O60861 476 aa13.36□□□□□ -0.27
RFPL3-201ENST00000249007 TPM2P07951 284 aa13.36□□□□□ -0.27
RFPL3-201ENST00000249007 RHOP08100 348 aa13.36□□□□□ -0.27
RFPL3-201ENST00000249007 FCARP24071 287 aa13.36□□□□□ -0.27
RFPL3-201ENST00000249007 CCNE1P24864 410 aa13.36□□□□□ -0.27
RFPL3-201ENST00000249007 MCM5P33992 734 aa13.36□□□□□ -0.27
RFPL3-201ENST00000249007 LIFRP42702 1097 aa13.36□□□□□ -0.27
RFPL3-201ENST00000249007 PTGDRQ13258 359 aa13.36□□□□□ -0.27
RFPL3-201ENST00000249007 LRRC32Q14392 662 aa13.36□□□□□ -0.27
RFPL3-201ENST00000249007 SRGAP1Q7Z6B7 1085 aa13.36□□□□□ -0.27
RFPL3-201ENST00000249007 CEP57Q86XR8 500 aa13.36□□□□□ -0.27
RFPL3-201ENST00000249007 MAP4K3Q8IVH8 894 aa13.36□□□□□ -0.27
RFPL3-201ENST00000249007 LNX1Q8TBB1 728 aaPredicted RBP13.36□□□□□ -0.27
RFPL3-201ENST00000249007 LENG9Q96B70 501 aa13.36□□□□□ -0.27
RFPL3-201ENST00000249007 KIF12Q96FN5 646 aa13.36□□□□□ -0.27
RFPL3-201ENST00000249007 JPH2Q9BR39 696 aaPredicted RBP13.36□□□□□ -0.27
RFPL3-201ENST00000249007 SCNM1Q9BWG6 230 aa13.36□□□□□ -0.27
RFPL3-201ENST00000249007 APOL6Q9BWW8 343 aa13.36□□□□□ -0.27
RFPL3-201ENST00000249007 EIF2AQ9BY44 585 aaKnown RBP13.36□□□□□ -0.27
RFPL3-201ENST00000249007 SMOC1Q9H4F8 434 aa13.36□□□□□ -0.27
RFPL3-201ENST00000249007 ZNF334Q9HCZ1 680 aaPredicted RBP13.36□□□□□ -0.27
RFPL3-201ENST00000249007 TRPV5Q9NQA5 729 aa13.36□□□□□ -0.27
RFPL3-201ENST00000249007 ACACAQ13085 2346 aa13.35□□□□□ -0.27
RFPL3-201ENST00000249007 COL4A2P08572 1712 aa13.35□□□□□ -0.27
RFPL3-201ENST00000249007 ADAM12O43184 909 aa13.35□□□□□ -0.27
RFPL3-201ENST00000249007 ERLIN2O94905 339 aa13.35□□□□□ -0.27
RFPL3-201ENST00000249007 ZIC2O95409 532 aaPredicted RBP13.35□□□□□ -0.27
RFPL3-201ENST00000249007 TOP3BO95985 862 aaKnown RBP13.35□□□□□ -0.27
RFPL3-201ENST00000249007 SRGAP2CP0DJJ0 459 aa13.35□□□□□ -0.27
RFPL3-201ENST00000249007 CEBPBP17676 345 aa13.35□□□□□ -0.27
RFPL3-201ENST00000249007 GDI1P31150 447 aa13.35□□□□□ -0.27
RFPL3-201ENST00000249007 HOXA6P31267 233 aa13.35□□□□□ -0.27
RFPL3-201ENST00000249007 RAP1GAPP47736 663 aa13.35□□□□□ -0.27
RFPL3-201ENST00000249007 FAM78AQ5JUQ0 283 aa13.35□□□□□ -0.27
RFPL3-201ENST00000249007 PLA2G2CQ5R387 149 aa13.35□□□□□ -0.27
RFPL3-201ENST00000249007 FAM171A1Q5VUB5 890 aa13.35□□□□□ -0.27
RFPL3-201ENST00000249007 B4GALNT3Q6L9W6 998 aa13.35□□□□□ -0.27
RFPL3-201ENST00000249007 POTEHQ6S545 545 aa13.35□□□□□ -0.27
RFPL3-201ENST00000249007 Q6ZS52 159 aa13.35□□□□□ -0.27
RFPL3-201ENST00000249007 CACNA2D4Q7Z3S7 1137 aa13.35□□□□□ -0.27
RFPL3-201ENST00000249007 WDR5BQ86VZ2 330 aa13.35□□□□□ -0.27
RFPL3-201ENST00000249007 HASPINQ8TF76 798 aa13.35□□□□□ -0.27
RFPL3-201ENST00000249007 RIT2Q99578 217 aa13.35□□□□□ -0.27
RFPL3-201ENST00000249007 UNC45AQ9H3U1 944 aa13.35□□□□□ -0.27
RFPL3-201ENST00000249007 RBM12Q9NTZ6 932 aaKnown RBP13.35□□□□□ -0.27
RFPL3-201ENST00000249007 GIT1Q9Y2X7 761 aa13.35□□□□□ -0.27
RFPL3-201ENST00000249007 PCDHGA5Q9Y5G8 931 aa13.35□□□□□ -0.27
RFPL3-201ENST00000249007 V9GY48 417 aaPredicted RBP13.35□□□□□ -0.27
RFPL3-201ENST00000249007 STBD1O95210 358 aa13.34□□□□□ -0.27
RFPL3-201ENST00000249007 PSMC3P17980 439 aa13.34□□□□□ -0.27
RFPL3-201ENST00000249007 MPLP40238 635 aa13.34□□□□□ -0.27
RFPL3-201ENST00000249007 GRIK3Q13003 919 aa13.34□□□□□ -0.27
RFPL3-201ENST00000249007 SH3PXD2AQ5TCZ1 1133 aa13.34□□□□□ -0.27
RFPL3-201ENST00000249007 LRCH2Q5VUJ6 765 aa13.34□□□□□ -0.27
RFPL3-201ENST00000249007 TCEAL6Q6IPX3 200 aa13.34□□□□□ -0.27
RFPL3-201ENST00000249007 KBTBD6Q86V97 674 aa13.34□□□□□ -0.27
RFPL3-201ENST00000249007 GSTCDQ8NEC7 633 aa13.34□□□□□ -0.27
RFPL3-201ENST00000249007 GAB3Q8WWW8 586 aa13.34□□□□□ -0.27
RFPL3-201ENST00000249007 TCEAL3Q969E4 200 aa13.34□□□□□ -0.27
RFPL3-201ENST00000249007 EDEM2Q9BV94 578 aa13.34□□□□□ -0.27
RFPL3-201ENST00000249007 VPS45Q9NRW7 570 aa13.34□□□□□ -0.27
RFPL3-201ENST00000249007 C2orf42Q9NWW7 574 aa13.34□□□□□ -0.27
RFPL3-201ENST00000249007 CACNG4Q9UBN1 327 aa13.34□□□□□ -0.27
RFPL3-201ENST00000249007 ASXL3Q9C0F0 2248 aa13.33□□□□□ -0.28
RFPL3-201ENST00000249007 DDX11L8A8MPP1 907 aa13.33□□□□□ -0.28
RFPL3-201ENST00000249007 MSH4O15457 936 aa13.33□□□□□ -0.28
RFPL3-201ENST00000249007 RPP40O75818 363 aaKnown RBP13.33□□□□□ -0.28
RFPL3-201ENST00000249007 CIITAP33076 1130 aa13.33□□□□□ -0.28
RFPL3-201ENST00000249007 OR1D2P34982 312 aa13.33□□□□□ -0.28
RFPL3-201ENST00000249007 RAB33AQ14088 237 aa13.33□□□□□ -0.28
RFPL3-201ENST00000249007 NOTUMQ6P988 496 aa13.33□□□□□ -0.28
RFPL3-201ENST00000249007 PDXDC1Q6P996 788 aa13.33□□□□□ -0.28
RFPL3-201ENST00000249007 RTL10Q7L3V2 364 aa13.33□□□□□ -0.28
RFPL3-201ENST00000249007 MIER3Q7Z3K6 550 aa13.33□□□□□ -0.28
RFPL3-201ENST00000249007 CHD1LQ86WJ1 897 aa13.33□□□□□ -0.28
RFPL3-201ENST00000249007 HACE1Q8IYU2 909 aa13.33□□□□□ -0.28
RFPL3-201ENST00000249007 REXO1Q8N1G1 1221 aaKnown RBP13.33□□□□□ -0.28
RFPL3-201ENST00000249007 RDM1Q8NG50 284 aa13.33□□□□□ -0.28
RFPL3-201ENST00000249007 PRPF31Q8WWY3 499 aaKnown RBP13.33□□□□□ -0.28
RFPL3-201ENST00000249007 PSPC1Q8WXF1 523 aaKnown RBP13.33□□□□□ -0.28
RFPL3-201ENST00000249007 SLC7A3Q8WY07 619 aa13.33□□□□□ -0.28
RFPL3-201ENST00000249007 CCDC51Q96ER9 411 aa13.33□□□□□ -0.28
RFPL3-201ENST00000249007 PAAF1Q9BRP4 392 aa13.33□□□□□ -0.28
RFPL3-201ENST00000249007 TEKT3Q9BXF9 490 aa13.33□□□□□ -0.28
RFPL3-201ENST00000249007 TRIM6Q9C030 488 aaPredicted RBP13.33□□□□□ -0.28
RFPL3-201ENST00000249007 NXF3Q9H4D5 531 aaKnown RBP13.33□□□□□ -0.28
RFPL3-201ENST00000249007 AVENQ9NQS1 362 aaPredicted RBP13.33□□□□□ -0.28
RFPL3-201ENST00000249007 C4orf47A7E2U8 309 aa13.32□□□□□ -0.28
RFPL3-201ENST00000249007 ZNF263O14978 683 aa13.32□□□□□ -0.28
RFPL3-201ENST00000249007 CCDC192P0DO97 292 aa13.32□□□□□ -0.28
RFPL3-201ENST00000249007 HOXC13P31276 330 aa13.32□□□□□ -0.28
RFPL3-201ENST00000249007 NFKBIBQ15653 356 aa13.32□□□□□ -0.28
RFPL3-201ENST00000249007 SOWAHCQ53LP3 525 aaPredicted RBP13.32□□□□□ -0.28
RFPL3-201ENST00000249007 DAB2IPQ5VWQ8 1189 aa13.32□□□□□ -0.28
RFPL3-201ENST00000249007 PLA2G4FQ68DD2 849 aa13.32□□□□□ -0.28
RFPL3-201ENST00000249007 C1orf228Q6PIY5 440 aa13.32□□□□□ -0.28
RFPL3-201ENST00000249007 VITQ6UXI7 678 aa13.32□□□□□ -0.28
RFPL3-201ENST00000249007 ANO5Q75V66 913 aa13.32□□□□□ -0.28
RFPL3-201ENST00000249007 EXOC6Q8TAG9 804 aa13.32□□□□□ -0.28
RFPL3-201ENST00000249007 RUFY2Q8WXA3 655 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms