RNA–Protein interactions for RNA: ENST00000244302.8

HIF3A-201, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-201ENST00000244302 B4GALT4O60513 344 aa13.99□□□□□ -0.17
HIF3A-201ENST00000244302 ERLIN2O94905 339 aa13.99□□□□□ -0.17
HIF3A-201ENST00000244302 CST3P01034 146 aaPredicted RBP13.99□□□□□ -0.17
HIF3A-201ENST00000244302 STAG3L1P0CL83 205 aa13.99□□□□□ -0.17
HIF3A-201ENST00000244302 HSPA8P11142 646 aaKnown RBP13.99□□□□□ -0.17
HIF3A-201ENST00000244302 GNAT1P11488 350 aa13.99□□□□□ -0.17
HIF3A-201ENST00000244302 UCHL3P15374 230 aa13.99□□□□□ -0.17
HIF3A-201ENST00000244302 TNNI1P19237 187 aa13.99□□□□□ -0.17
HIF3A-201ENST00000244302 TDRD10Q5VZ19 366 aaKnown RBP13.99□□□□□ -0.17
HIF3A-201ENST00000244302 IQCEQ6IPM2 695 aa13.99□□□□□ -0.17
HIF3A-201ENST00000244302 SPOPLQ6IQ16 392 aa13.99□□□□□ -0.17
HIF3A-201ENST00000244302 SRGAP1Q7Z6B7 1085 aa13.99□□□□□ -0.17
HIF3A-201ENST00000244302 FAM228AQ86W67 206 aa13.99□□□□□ -0.17
HIF3A-201ENST00000244302 TATDN2Q93075 761 aa13.99□□□□□ -0.17
HIF3A-201ENST00000244302 GLT1D1Q96MS3 346 aa13.99□□□□□ -0.17
HIF3A-201ENST00000244302 INTS2Q9H0H0 1204 aaKnown RBP13.99□□□□□ -0.17
HIF3A-201ENST00000244302 RNF39Q9H2S5 420 aa13.99□□□□□ -0.17
HIF3A-201ENST00000244302 VNN1O95497 513 aa13.99□□□□□ -0.17
HIF3A-201ENST00000244302 NPTXRO95502 500 aa13.99□□□□□ -0.17
HIF3A-201ENST00000244302 CALCAP01258 141 aa13.99□□□□□ -0.17
HIF3A-201ENST00000244302 IBSPP21815 317 aaPredicted RBP13.99□□□□□ -0.17
HIF3A-201ENST00000244302 GUCY2FP51841 1108 aa13.99□□□□□ -0.17
HIF3A-201ENST00000244302 ATN1P54259 1190 aaPredicted RBP13.99□□□□□ -0.17
HIF3A-201ENST00000244302 PSMD6Q15008 389 aa13.99□□□□□ -0.17
HIF3A-201ENST00000244302 EPC2Q52LR7 807 aa13.99□□□□□ -0.17
HIF3A-201ENST00000244302 DNAAF5Q86Y56 855 aa13.99□□□□□ -0.17
HIF3A-201ENST00000244302 EFCAB13Q8IY85 973 aa13.99□□□□□ -0.17
HIF3A-201ENST00000244302 EHBP1Q8NDI1 1231 aa13.99□□□□□ -0.17
HIF3A-201ENST00000244302 OR8K1Q8NGG5 319 aa13.99□□□□□ -0.17
HIF3A-201ENST00000244302 ZNF592Q92610 1267 aa13.99□□□□□ -0.17
HIF3A-201ENST00000244302 STARD7Q9NQZ5 370 aa13.99□□□□□ -0.17
HIF3A-201ENST00000244302 MEIS3P2A8K0S8 358 aa13.98□□□□□ -0.17
HIF3A-201ENST00000244302 MAPK13O15264 365 aa13.98□□□□□ -0.17
HIF3A-201ENST00000244302 SLU7O95391 586 aaKnown RBP13.98□□□□□ -0.17
HIF3A-201ENST00000244302 ABL1P00519 1130 aa13.98□□□□□ -0.17
HIF3A-201ENST00000244302 C4BPAP04003 597 aaKnown RBP13.98□□□□□ -0.17
HIF3A-201ENST00000244302 AKAP5P24588 427 aa13.98□□□□□ -0.17
HIF3A-201ENST00000244302 MXI1P50539 228 aa13.98□□□□□ -0.17
HIF3A-201ENST00000244302 MRPS6P82932 125 aaKnown RBP13.98□□□□□ -0.17
HIF3A-201ENST00000244302 NFX1Q12986 1120 aaKnown RBP13.98□□□□□ -0.17
HIF3A-201ENST00000244302 RAPGEF1Q13905 1077 aa13.98□□□□□ -0.17
HIF3A-201ENST00000244302 SLC10A6Q3KNW5 377 aa13.98□□□□□ -0.17
HIF3A-201ENST00000244302 PANX2Q96RD6 677 aa13.98□□□□□ -0.17
HIF3A-201ENST00000244302 DNAJC7Q99615 494 aa13.98□□□□□ -0.17
HIF3A-201ENST00000244302 APOL6Q9BWW8 343 aa13.98□□□□□ -0.17
HIF3A-201ENST00000244302 ACP6Q9NPH0 428 aa13.98□□□□□ -0.17
HIF3A-201ENST00000244302 SNTG2Q9NY99 539 aa13.98□□□□□ -0.17
HIF3A-201ENST00000244302 PIN4Q9Y237 131 aaKnown RBP13.98□□□□□ -0.17
HIF3A-201ENST00000244302 LACTBL1A8MY62 500 aa13.97□□□□□ -0.17
HIF3A-201ENST00000244302 MNX1P50219 401 aaPredicted RBP13.97□□□□□ -0.17
HIF3A-201ENST00000244302 CRYBB1P53674 252 aaPredicted RBP13.97□□□□□ -0.17
HIF3A-201ENST00000244302 ZBED6P86452 979 aa13.97□□□□□ -0.17
HIF3A-201ENST00000244302 GABPB1Q06547 395 aaPredicted RBP13.97□□□□□ -0.17
HIF3A-201ENST00000244302 ARHGAP44Q17R89 818 aa13.97□□□□□ -0.17
HIF3A-201ENST00000244302 ZNF618Q5T7W0 954 aa13.97□□□□□ -0.17
HIF3A-201ENST00000244302 CACNA2D4Q7Z3S7 1137 aa13.97□□□□□ -0.17
HIF3A-201ENST00000244302 CNGA4Q8IV77 575 aa13.97□□□□□ -0.17
HIF3A-201ENST00000244302 BRSK2Q8IWQ3 736 aa13.97□□□□□ -0.17
HIF3A-201ENST00000244302 TMC2Q8TDI7 906 aa13.97□□□□□ -0.17
HIF3A-201ENST00000244302 DIS3LQ8TF46 1054 aaKnown RBP13.97□□□□□ -0.17
HIF3A-201ENST00000244302 FNBP1Q96RU3 617 aa13.97□□□□□ -0.17
HIF3A-201ENST00000244302 MTMR12Q9C0I1 747 aa13.97□□□□□ -0.17
HIF3A-201ENST00000244302 GPR88Q9GZN0 384 aa13.97□□□□□ -0.17
HIF3A-201ENST00000244302 NXF3Q9H4D5 531 aaKnown RBP13.97□□□□□ -0.17
HIF3A-201ENST00000244302 L2HGDHQ9H9P8 463 aa13.97□□□□□ -0.17
HIF3A-201ENST00000244302 NFICP08651 508 aa13.97□□□□□ -0.17
HIF3A-201ENST00000244302 GHRP10912 638 aa13.97□□□□□ -0.17
HIF3A-201ENST00000244302 ABCD1P33897 745 aa13.97□□□□□ -0.17
HIF3A-201ENST00000244302 MCCD1P59942 119 aaPredicted RBP13.97□□□□□ -0.17
HIF3A-201ENST00000244302 PPP2R3AQ06190 1150 aa13.97□□□□□ -0.17
HIF3A-201ENST00000244302 MGAT3Q09327 533 aa13.97□□□□□ -0.17
HIF3A-201ENST00000244302 TRIM71Q2Q1W2 868 aaKnown RBP13.97□□□□□ -0.17
HIF3A-201ENST00000244302 FIGNQ5HY92 759 aa13.97□□□□□ -0.17
HIF3A-201ENST00000244302 UBXN11Q5T124 520 aa13.97□□□□□ -0.17
HIF3A-201ENST00000244302 KRT39Q6A163 491 aa13.97□□□□□ -0.17
HIF3A-201ENST00000244302 TAF2Q6P1X5 1199 aa13.97□□□□□ -0.17
HIF3A-201ENST00000244302 PDXDC1Q6P996 788 aa13.97□□□□□ -0.17
HIF3A-201ENST00000244302 C15orf39Q6ZRI6 1047 aa13.97□□□□□ -0.17
HIF3A-201ENST00000244302 NUP58Q9BVL2 599 aa13.97□□□□□ -0.17
HIF3A-201ENST00000244302 NAA15Q9BXJ9 866 aaKnown RBP13.97□□□□□ -0.17
HIF3A-201ENST00000244302 TMEM8AQ9HCN3 771 aa13.97□□□□□ -0.17
HIF3A-201ENST00000244302 PRDM10Q9NQV6 1147 aa13.97□□□□□ -0.17
HIF3A-201ENST00000244302 KLK14Q9P0G3 267 aa13.97□□□□□ -0.17
HIF3A-201ENST00000244302 ARHGAP20Q9P2F6 1191 aa13.97□□□□□ -0.17
HIF3A-201ENST00000244302 DNAJC12Q9UKB3 198 aa13.97□□□□□ -0.17
HIF3A-201ENST00000244302 ST3GAL5Q9UNP4 418 aa13.97□□□□□ -0.17
HIF3A-201ENST00000244302 NOD1Q9Y239 953 aa13.97□□□□□ -0.17
HIF3A-201ENST00000244302 UMODL1Q5DID0 1318 aa13.97□□□□□ -0.17
HIF3A-201ENST00000244302 MOXD2PA6NHM9 499 aa13.96□□□□□ -0.17
HIF3A-201ENST00000244302 AFF1P51825 1210 aaKnown RBP13.96□□□□□ -0.17
HIF3A-201ENST00000244302 CLDN10P78369 228 aa13.96□□□□□ -0.17
HIF3A-201ENST00000244302 TFAMQ00059 246 aaKnown RBP13.96□□□□□ -0.17
HIF3A-201ENST00000244302 SESTD1Q86VW0 696 aa13.96□□□□□ -0.17
HIF3A-201ENST00000244302 ARRDC4Q8NCT1 418 aa13.96□□□□□ -0.17
HIF3A-201ENST00000244302 ACRBPQ8NEB7 543 aa13.96□□□□□ -0.17
HIF3A-201ENST00000244302 PPP1R13BQ96KQ4 1090 aa13.96□□□□□ -0.17
HIF3A-201ENST00000244302 SENP6Q9GZR1 1112 aaPredicted RBP13.96□□□□□ -0.17
HIF3A-201ENST00000244302 UBE2TQ9NPD8 197 aaPredicted RBP13.96□□□□□ -0.17
HIF3A-201ENST00000244302 LDHAP00338 332 aaKnown RBP13.96□□□□□ -0.18
HIF3A-201ENST00000244302 TPM1P09493 284 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms