RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 STRN3Q13033 797 aa16.56■□□□□ 0.24
DDX55-201ENST00000238146 NAIF1Q69YI7 327 aaPredicted RBP16.56■□□□□ 0.24
DDX55-201ENST00000238146 HHIPL2Q6UWX4 724 aa16.56■□□□□ 0.24
DDX55-201ENST00000238146 FAM47EQ6ZV65 393 aa16.56■□□□□ 0.24
DDX55-201ENST00000238146 PPM1KQ8N3J5 372 aa16.56■□□□□ 0.24
DDX55-201ENST00000238146 GRAMD1AQ96CP6 724 aa16.56■□□□□ 0.24
DDX55-201ENST00000238146 PLVAPQ9BX97 442 aa16.56■□□□□ 0.24
DDX55-201ENST00000238146 PITPNM3Q9BZ71 974 aa16.56■□□□□ 0.24
DDX55-201ENST00000238146 ANAPC5Q9UJX4 755 aa16.56■□□□□ 0.24
DDX55-201ENST00000238146 WFS1O76024 890 aa16.55■□□□□ 0.24
DDX55-201ENST00000238146 MYCNP04198 464 aaPredicted RBP16.55■□□□□ 0.24
DDX55-201ENST00000238146 MUTP22033 750 aa16.55■□□□□ 0.24
DDX55-201ENST00000238146 GRIK3Q13003 919 aa16.55■□□□□ 0.24
DDX55-201ENST00000238146 SYDE1Q6ZW31 735 aaPredicted RBP16.55■□□□□ 0.24
DDX55-201ENST00000238146 MAEAQ7L5Y9 396 aa16.55■□□□□ 0.24
DDX55-201ENST00000238146 GMCL1P1Q8NEA9 526 aa16.55■□□□□ 0.24
DDX55-201ENST00000238146 SHC3Q92529 594 aa16.55■□□□□ 0.24
DDX55-201ENST00000238146 TEKT1Q969V4 418 aa16.55■□□□□ 0.24
DDX55-201ENST00000238146 TRAIPQ9BWF2 469 aa16.55■□□□□ 0.24
DDX55-201ENST00000238146 SMCHD1A6NHR9 2005 aa16.55■□□□□ 0.24
DDX55-201ENST00000238146 ARHGEF35A5YM69 484 aa16.55■□□□□ 0.24
DDX55-201ENST00000238146 TULP1O00294 542 aaPredicted RBP16.55■□□□□ 0.24
DDX55-201ENST00000238146 ATF2P15336 505 aa16.55■□□□□ 0.24
DDX55-201ENST00000238146 CYP11B1P15538 503 aa16.55■□□□□ 0.24
DDX55-201ENST00000238146 ADCY8P40145 1251 aa16.55■□□□□ 0.24
DDX55-201ENST00000238146 VPS41P49754 854 aa16.55■□□□□ 0.24
DDX55-201ENST00000238146 MXI1P50539 228 aa16.55■□□□□ 0.24
DDX55-201ENST00000238146 WDR4P57081 412 aaKnown RBP16.55■□□□□ 0.24
DDX55-201ENST00000238146 UBXN2AP68543 259 aa16.55■□□□□ 0.24
DDX55-201ENST00000238146 CAV1Q03135 178 aa16.55■□□□□ 0.24
DDX55-201ENST00000238146 PPP1R21Q6ZMI0 780 aa16.55■□□□□ 0.24
DDX55-201ENST00000238146 KIAA0825Q8IV33 1275 aa16.55■□□□□ 0.24
DDX55-201ENST00000238146 MICAL1Q8TDZ2 1067 aa16.55■□□□□ 0.24
DDX55-201ENST00000238146 FBF1Q8TES7 1133 aa16.55■□□□□ 0.24
DDX55-201ENST00000238146 LXNQ9BS40 222 aa16.55■□□□□ 0.24
DDX55-201ENST00000238146 UNC45AQ9H3U1 944 aa16.55■□□□□ 0.24
DDX55-201ENST00000238146 SORBS3O60504 671 aa16.54■□□□□ 0.24
DDX55-201ENST00000238146 GAS8O95995 478 aa16.54■□□□□ 0.24
DDX55-201ENST00000238146 CFBP00751 764 aa16.54■□□□□ 0.24
DDX55-201ENST00000238146 BMP3P12645 472 aa16.54■□□□□ 0.24
DDX55-201ENST00000238146 ABL2P42684 1182 aa16.54■□□□□ 0.24
DDX55-201ENST00000238146 BLMHQ13867 455 aa16.54■□□□□ 0.24
DDX55-201ENST00000238146 CDCA2Q69YH5 1023 aaPredicted RBP16.54■□□□□ 0.24
DDX55-201ENST00000238146 CAPRIN2Q6IMN6 1127 aaKnown RBP16.54■□□□□ 0.24
DDX55-201ENST00000238146 MIS18BP1Q6P0N0 1132 aa16.54■□□□□ 0.24
DDX55-201ENST00000238146 KCNV2Q8TDN2 545 aa16.54■□□□□ 0.24
DDX55-201ENST00000238146 RAB3IPQ96QF0 476 aaPredicted RBP16.54■□□□□ 0.24
DDX55-201ENST00000238146 DCLK3Q9C098 648 aa16.54■□□□□ 0.24
DDX55-201ENST00000238146 MYLK2Q9H1R3 596 aa16.54■□□□□ 0.24
DDX55-201ENST00000238146 EURLQ9NYK6 297 aa16.54■□□□□ 0.24
DDX55-201ENST00000238146 NKX1-2Q9UD57 310 aaPredicted RBP16.54■□□□□ 0.24
DDX55-201ENST00000238146 ACTL7BQ9Y614 415 aa16.54■□□□□ 0.24
DDX55-201ENST00000238146 ADAMTSL1Q8N6G6 1762 aa16.54■□□□□ 0.24
DDX55-201ENST00000238146 GDF11O95390 407 aa16.54■□□□□ 0.24
DDX55-201ENST00000238146 CDR2Q01850 454 aa16.54■□□□□ 0.24
DDX55-201ENST00000238146 FAM196AQ6ZSG2 479 aa16.54■□□□□ 0.24
DDX55-201ENST00000238146 XXYLT1Q8NBI6 393 aa16.54■□□□□ 0.24
DDX55-201ENST00000238146 SEMA4DQ92854 862 aa16.54■□□□□ 0.24
DDX55-201ENST00000238146 TMEM206Q9H813 350 aa16.54■□□□□ 0.24
DDX55-201ENST00000238146 TXLNGQ9NUQ3 528 aa16.54■□□□□ 0.24
DDX55-201ENST00000238146 HSPBP1Q9NZL4 362 aa16.54■□□□□ 0.24
DDX55-201ENST00000238146 R3HDM2Q9Y2K5 976 aaKnown RBP16.54■□□□□ 0.24
DDX55-201ENST00000238146 USP20Q9Y2K6 914 aa16.54■□□□□ 0.24
DDX55-201ENST00000238146 SERPINB2P05120 415 aa16.53■□□□□ 0.24
DDX55-201ENST00000238146 HOXA10P31260 410 aaPredicted RBP16.53■□□□□ 0.24
DDX55-201ENST00000238146 MAN1A1P33908 653 aa16.53■□□□□ 0.24
DDX55-201ENST00000238146 GCKP35557 465 aa16.53■□□□□ 0.24
DDX55-201ENST00000238146 SATB1Q01826 763 aa16.53■□□□□ 0.24
DDX55-201ENST00000238146 TMEM179Q6ZVK1 233 aa16.53■□□□□ 0.24
DDX55-201ENST00000238146 GRK7Q8WTQ7 553 aa16.53■□□□□ 0.24
DDX55-201ENST00000238146 C9orf72Q96LT7 481 aa16.53■□□□□ 0.24
DDX55-201ENST00000238146 PI4KBQ9UBF8 816 aa16.53■□□□□ 0.24
DDX55-201ENST00000238146 PRR12Q9ULL5 1215 aa16.53■□□□□ 0.24
DDX55-201ENST00000238146 CORO1CQ9ULV4 474 aaPredicted RBP16.53■□□□□ 0.24
DDX55-201ENST00000238146 AHDC1Q5TGY3 1603 aaPredicted RBP16.53■□□□□ 0.24
DDX55-201ENST00000238146 RASA4BC9J798 803 aa16.53■□□□□ 0.24
DDX55-201ENST00000238146 LIN7AO14910 233 aaPredicted RBP16.53■□□□□ 0.24
DDX55-201ENST00000238146 RASA4O43374 803 aa16.53■□□□□ 0.24
DDX55-201ENST00000238146 GRIN3BO60391 1043 aa16.53■□□□□ 0.24
DDX55-201ENST00000238146 POTEJP0CG39 1038 aa16.53■□□□□ 0.24
DDX55-201ENST00000238146 ARP10275 920 aa16.53■□□□□ 0.24
DDX55-201ENST00000238146 IL9RQ01113 521 aa16.53■□□□□ 0.24
DDX55-201ENST00000238146 PARP6Q2NL67 630 aa16.53■□□□□ 0.24
DDX55-201ENST00000238146 TATDN1Q6P1N9 297 aa16.53■□□□□ 0.24
DDX55-201ENST00000238146 PADI6Q6TGC4 694 aa16.53■□□□□ 0.24
DDX55-201ENST00000238146 SH3BP5LQ7L8J4 393 aa16.53■□□□□ 0.24
DDX55-201ENST00000238146 PRUNE1Q86TP1 453 aa16.53■□□□□ 0.24
DDX55-201ENST00000238146 C12orf56Q8IXR9 622 aa16.53■□□□□ 0.24
DDX55-201ENST00000238146 ATL2Q8NHH9 583 aa16.53■□□□□ 0.24
DDX55-201ENST00000238146 TMEM174Q8WUU8 243 aa16.53■□□□□ 0.24
DDX55-201ENST00000238146 LRMDAQ9H2I8 198 aa16.53■□□□□ 0.24
DDX55-201ENST00000238146 LRRC4BQ9NT99 713 aa16.53■□□□□ 0.24
DDX55-201ENST00000238146 ANAPC7Q9UJX3 599 aa16.53■□□□□ 0.24
DDX55-201ENST00000238146 NEU2Q9Y3R4 380 aa16.53■□□□□ 0.24
DDX55-201ENST00000238146 PCDHAC2Q9Y5I4 1007 aa16.53■□□□□ 0.24
DDX55-201ENST00000238146 FAM47DPA6NHR8 397 aa16.53■□□□□ 0.24
DDX55-201ENST00000238146 RRM1P23921 792 aa16.53■□□□□ 0.24
DDX55-201ENST00000238146 POLGP54098 1239 aaPredicted RBP16.53■□□□□ 0.24
DDX55-201ENST00000238146 MFAP3P55082 362 aa16.53■□□□□ 0.24
DDX55-201ENST00000238146 STAT4Q14765 748 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms