RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 GJB5O95377 273 aa11.05□□□□□ -0.64
HMGCL-201ENST00000235958 FGFR1OPO95684 399 aaKnown RBP11.05□□□□□ -0.64
HMGCL-201ENST00000235958 POMCP01189 267 aa11.05□□□□□ -0.64
HMGCL-201ENST00000235958 ZNF445P59923 1031 aa11.05□□□□□ -0.64
HMGCL-201ENST00000235958 CYP24A1Q07973 514 aa11.05□□□□□ -0.64
HMGCL-201ENST00000235958 HSP90AA2PQ14568 343 aaPredicted RBP11.05□□□□□ -0.64
HMGCL-201ENST00000235958 TPD52L1Q16890 204 aaPredicted RBP11.05□□□□□ -0.64
HMGCL-201ENST00000235958 XKR4Q5GH76 650 aa11.05□□□□□ -0.64
HMGCL-201ENST00000235958 NOMO2Q5JPE7 1267 aa11.05□□□□□ -0.64
HMGCL-201ENST00000235958 FAM109BQ6ICB4 259 aaPredicted RBP11.05□□□□□ -0.64
HMGCL-201ENST00000235958 CHRDL2Q6WN34 429 aa11.05□□□□□ -0.64
HMGCL-201ENST00000235958 LRRC55Q6ZSA7 311 aa11.05□□□□□ -0.64
HMGCL-201ENST00000235958 IRF2BP1Q8IU81 584 aa11.05□□□□□ -0.64
HMGCL-201ENST00000235958 FAM186BQ8IYM0 893 aa11.05□□□□□ -0.64
HMGCL-201ENST00000235958 ABI1Q8IZP0 508 aa11.05□□□□□ -0.64
HMGCL-201ENST00000235958 ZNF689Q96CS4 500 aaPredicted RBP11.05□□□□□ -0.64
HMGCL-201ENST00000235958 BORCS6Q96GS4 357 aa11.05□□□□□ -0.64
HMGCL-201ENST00000235958 CEP63Q96MT8 703 aa11.05□□□□□ -0.64
HMGCL-201ENST00000235958 ZMAT2Q96NC0 199 aaKnown RBP11.05□□□□□ -0.64
HMGCL-201ENST00000235958 SLC9A7Q96T83 725 aa11.05□□□□□ -0.64
HMGCL-201ENST00000235958 POP1Q99575 1024 aaKnown RBP11.05□□□□□ -0.64
HMGCL-201ENST00000235958 TMEM117Q9H0C3 514 aa11.05□□□□□ -0.64
HMGCL-201ENST00000235958 PRO3102Q9H379 93 aa11.05□□□□□ -0.64
HMGCL-201ENST00000235958 PDE11AQ9HCR9 933 aa11.05□□□□□ -0.64
HMGCL-201ENST00000235958 TOPORSQ9NS56 1045 aaPredicted RBP11.05□□□□□ -0.64
HMGCL-201ENST00000235958 RBAKQ9NYW8 714 aaPredicted RBP11.05□□□□□ -0.64
HMGCL-201ENST00000235958 KANSL3Q9P2N6 904 aa11.05□□□□□ -0.64
HMGCL-201ENST00000235958 INPP5FQ9Y2H2 1132 aa11.05□□□□□ -0.64
HMGCL-201ENST00000235958 INSL6Q9Y581 213 aa11.05□□□□□ -0.64
HMGCL-201ENST00000235958 PTPRSQ13332 1948 aa11.05□□□□□ -0.64
HMGCL-201ENST00000235958 FNDC1Q4ZHG4 1894 aaPredicted RBP11.04□□□□□ -0.64
HMGCL-201ENST00000235958 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.04□□□□□ -0.64
HMGCL-201ENST00000235958 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.04□□□□□ -0.64
HMGCL-201ENST00000235958 TBKBP1A7MCY6 615 aa11.04□□□□□ -0.64
HMGCL-201ENST00000235958 PTGESO14684 152 aa11.04□□□□□ -0.64
HMGCL-201ENST00000235958 MAPK13O15264 365 aa11.04□□□□□ -0.64
HMGCL-201ENST00000235958 INPPL1O15357 1258 aa11.04□□□□□ -0.64
HMGCL-201ENST00000235958 TLL1O43897 1013 aa11.04□□□□□ -0.64
HMGCL-201ENST00000235958 IL18RAPO95256 599 aa11.04□□□□□ -0.64
HMGCL-201ENST00000235958 CAVIN2O95810 425 aa11.04□□□□□ -0.64
HMGCL-201ENST00000235958 THP07101 528 aa11.04□□□□□ -0.64
HMGCL-201ENST00000235958 KCNE1P15382 129 aa11.04□□□□□ -0.64
HMGCL-201ENST00000235958 MLH1P40692 756 aa11.04□□□□□ -0.64
HMGCL-201ENST00000235958 RABGGTBP53611 331 aa11.04□□□□□ -0.64
HMGCL-201ENST00000235958 WNT7BP56706 349 aa11.04□□□□□ -0.64
HMGCL-201ENST00000235958 HTRA4P83105 476 aaPredicted RBP11.04□□□□□ -0.64
HMGCL-201ENST00000235958 SPAG1Q07617 926 aa11.04□□□□□ -0.64
HMGCL-201ENST00000235958 ZBTB6Q15916 424 aa11.04□□□□□ -0.64
HMGCL-201ENST00000235958 CREBRFQ8IUR6 639 aa11.04□□□□□ -0.64
HMGCL-201ENST00000235958 BRSK2Q8IWQ3 736 aa11.04□□□□□ -0.64
HMGCL-201ENST00000235958 CD302Q8IX05 232 aa11.04□□□□□ -0.64
HMGCL-201ENST00000235958 TDHQ8IZJ6 230 aa11.04□□□□□ -0.64
HMGCL-201ENST00000235958 PARD3BQ8TEW8 1205 aa11.04□□□□□ -0.64
HMGCL-201ENST00000235958 CCDC127Q96BQ5 260 aa11.04□□□□□ -0.64
HMGCL-201ENST00000235958 SNX27Q96L92 541 aa11.04□□□□□ -0.64
HMGCL-201ENST00000235958 RAD9AQ99638 391 aa11.04□□□□□ -0.64
HMGCL-201ENST00000235958 BPIFA3Q9BQP9 254 aa11.04□□□□□ -0.64
HMGCL-201ENST00000235958 ANP32EQ9BTT0 268 aa11.04□□□□□ -0.64
HMGCL-201ENST00000235958 MKNK1Q9BUB5 465 aa11.04□□□□□ -0.64
HMGCL-201ENST00000235958 TSPY26PQ9H489 355 aa11.04□□□□□ -0.64
HMGCL-201ENST00000235958 ASB7Q9H672 318 aa11.04□□□□□ -0.64
HMGCL-201ENST00000235958 SAMSN1Q9NSI8 373 aaKnown RBP11.04□□□□□ -0.64
HMGCL-201ENST00000235958 FANCLQ9NW38 375 aa11.04□□□□□ -0.64
HMGCL-201ENST00000235958 PLAGL2Q9UPG8 496 aa11.04□□□□□ -0.64
HMGCL-201ENST00000235958 NFE2L3Q9Y4A8 694 aa11.04□□□□□ -0.64
HMGCL-201ENST00000235958 ANK1P16157 1881 aa11.04□□□□□ -0.64
HMGCL-201ENST00000235958 LAMA2P24043 3122 aaKnown RBP11.03□□□□□ -0.64
HMGCL-201ENST00000235958 RANBP2P49792 3224 aaKnown RBP11.03□□□□□ -0.64
HMGCL-201ENST00000235958 SMTNL1A8MU46 457 aa11.03□□□□□ -0.64
HMGCL-201ENST00000235958 IKBKBO14920 756 aa11.03□□□□□ -0.64
HMGCL-201ENST00000235958 GNA14O95837 355 aa11.03□□□□□ -0.64
HMGCL-201ENST00000235958 EPB41P11171 864 aaKnown RBP11.03□□□□□ -0.64
HMGCL-201ENST00000235958 KRT13P13646 458 aa11.03□□□□□ -0.64
HMGCL-201ENST00000235958 SCNN1GP51170 649 aa11.03□□□□□ -0.64
HMGCL-201ENST00000235958 MCCD1P59942 119 aaPredicted RBP11.03□□□□□ -0.64
HMGCL-201ENST00000235958 DLG4P78352 724 aa11.03□□□□□ -0.64
HMGCL-201ENST00000235958 MYL5Q02045 173 aa11.03□□□□□ -0.64
HMGCL-201ENST00000235958 PPP2R3AQ06190 1150 aa11.03□□□□□ -0.64
HMGCL-201ENST00000235958 BTG3Q14201 252 aaPredicted RBP11.03□□□□□ -0.64
HMGCL-201ENST00000235958 NCAPHQ15003 741 aa11.03□□□□□ -0.64
HMGCL-201ENST00000235958 PSMD6Q15008 389 aa11.03□□□□□ -0.64
HMGCL-201ENST00000235958 IQCB1Q15051 598 aa11.03□□□□□ -0.64
HMGCL-201ENST00000235958 SURF1Q15526 300 aa11.03□□□□□ -0.64
HMGCL-201ENST00000235958 PAN2Q504Q3 1202 aaKnown RBP11.03□□□□□ -0.64
HMGCL-201ENST00000235958 HSP90AA4PQ58FG1 418 aa11.03□□□□□ -0.64
HMGCL-201ENST00000235958 GLRA4Q5JXX5 417 aa11.03□□□□□ -0.64
HMGCL-201ENST00000235958 PRPF38BQ5VTL8 546 aaKnown RBP11.03□□□□□ -0.64
HMGCL-201ENST00000235958 JADE1Q6IE81 842 aa11.03□□□□□ -0.64
HMGCL-201ENST00000235958 FRMD5Q7Z6J6 570 aa11.03□□□□□ -0.64
HMGCL-201ENST00000235958 ZNF280BQ86YH2 543 aa11.03□□□□□ -0.64
HMGCL-201ENST00000235958 DHX40Q8IX18 779 aaKnown RBP11.03□□□□□ -0.64
HMGCL-201ENST00000235958 AOPEPQ8N6M6 819 aa11.03□□□□□ -0.64
HMGCL-201ENST00000235958 URGCPQ8TCY9 931 aa11.03□□□□□ -0.64
HMGCL-201ENST00000235958 PLEKHO2Q8TD55 490 aa11.03□□□□□ -0.64
HMGCL-201ENST00000235958 TMC2Q8TDI7 906 aa11.03□□□□□ -0.64
HMGCL-201ENST00000235958 ZNF516Q92618 1163 aa11.03□□□□□ -0.64
HMGCL-201ENST00000235958 KIF12Q96FN5 646 aa11.03□□□□□ -0.64
HMGCL-201ENST00000235958 PPP1R10Q96QC0 940 aaKnown RBP11.03□□□□□ -0.64
HMGCL-201ENST00000235958 FNBP1Q96RU3 617 aa11.03□□□□□ -0.64
HMGCL-201ENST00000235958 RPS6KC1Q96S38 1066 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 168.6 ms