RNA–Protein interactions for RNA: ENST00000221847.5

EBI3-201, Transcript of Epstein-Barr virus induced 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EBI3, Length 1,186 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBI3-201ENST00000221847 SNX27Q96L92 541 aa17.49■□□□□ 0.39
EBI3-201ENST00000221847 TOPORSQ9NS56 1045 aaPredicted RBP17.49■□□□□ 0.39
EBI3-201ENST00000221847 EXOC1Q9NV70 894 aa17.49■□□□□ 0.39
EBI3-201ENST00000221847 CACNG4Q9UBN1 327 aa17.49■□□□□ 0.39
EBI3-201ENST00000221847 TDRD15B5MCY1 1934 aaKnown RBP17.49■□□□□ 0.39
EBI3-201ENST00000221847 COL6A3P12111 3177 aa17.48■□□□□ 0.39
EBI3-201ENST00000221847 SMIM28A0A1B0GU29 152 aa17.48■□□□□ 0.39
EBI3-201ENST00000221847 EIF3DO15371 548 aaKnown RBP eCLIP17.48■□□□□ 0.39
EBI3-201ENST00000221847 FAM189A1O60320 539 aa17.48■□□□□ 0.39
EBI3-201ENST00000221847 NR1I2O75469 434 aa17.48■□□□□ 0.39
EBI3-201ENST00000221847 RPN1P04843 607 aaKnown RBP17.48■□□□□ 0.39
EBI3-201ENST00000221847 CXCL8P10145 99 aa17.48■□□□□ 0.39
EBI3-201ENST00000221847 IRS1P35568 1242 aa17.48■□□□□ 0.39
EBI3-201ENST00000221847 ERVFC1P60507 584 aa17.48■□□□□ 0.39
EBI3-201ENST00000221847 DPYDQ12882 1025 aa17.48■□□□□ 0.39
EBI3-201ENST00000221847 TUSC3Q13454 348 aa17.48■□□□□ 0.39
EBI3-201ENST00000221847 NAB2Q15742 525 aa17.48■□□□□ 0.39
EBI3-201ENST00000221847 ZNF507Q8TCN5 953 aa17.48■□□□□ 0.39
EBI3-201ENST00000221847 SCFD1Q8WVM8 642 aa17.48■□□□□ 0.39
EBI3-201ENST00000221847 POMGNT1Q8WZA1 660 aa17.48■□□□□ 0.39
EBI3-201ENST00000221847 TMEM169Q96HH4 297 aa17.48■□□□□ 0.39
EBI3-201ENST00000221847 ZMAT2Q96NC0 199 aaKnown RBP17.48■□□□□ 0.39
EBI3-201ENST00000221847 PPP1R10Q96QC0 940 aaKnown RBP17.48■□□□□ 0.39
EBI3-201ENST00000221847 TMEM206Q9H813 350 aa17.48■□□□□ 0.39
EBI3-201ENST00000221847 PUF60Q9UHX1 559 aaKnown RBP17.48■□□□□ 0.39
EBI3-201ENST00000221847 AGO2Q9UKV8 859 aaKnown RBP17.48■□□□□ 0.39
EBI3-201ENST00000221847 LZTS1Q9Y250 596 aa17.48■□□□□ 0.39
EBI3-201ENST00000221847 PCDHGC5Q9Y5F6 944 aa17.48■□□□□ 0.39
EBI3-201ENST00000221847 TRIP11Q15643 1979 aa17.48■□□□□ 0.39
EBI3-201ENST00000221847 CARNS1A5YM72 827 aa17.47■□□□□ 0.39
EBI3-201ENST00000221847 CASTOR2A6NHX0 329 aa17.47■□□□□ 0.39
EBI3-201ENST00000221847 F8W810 466 aa17.47■□□□□ 0.39
EBI3-201ENST00000221847 ACOT2P49753 483 aa17.47■□□□□ 0.39
EBI3-201ENST00000221847 STK4Q13043 487 aa17.47■□□□□ 0.39
EBI3-201ENST00000221847 PSMD2Q13200 908 aa17.47■□□□□ 0.39
EBI3-201ENST00000221847 POSTNQ15063 836 aa17.47■□□□□ 0.39
EBI3-201ENST00000221847 ENOX2Q16206 610 aaKnown RBP17.47■□□□□ 0.39
EBI3-201ENST00000221847 KYAT1Q16773 422 aa17.47■□□□□ 0.39
EBI3-201ENST00000221847 TIGD5Q53EQ6 642 aa17.47■□□□□ 0.39
EBI3-201ENST00000221847 KANK3Q6NY19 840 aa17.47■□□□□ 0.39
EBI3-201ENST00000221847 NELFCDQ8IXH7 590 aa17.47■□□□□ 0.39
EBI3-201ENST00000221847 MICAL1Q8TDZ2 1067 aa17.47■□□□□ 0.39
EBI3-201ENST00000221847 PAAF1Q9BRP4 392 aa17.47■□□□□ 0.39
EBI3-201ENST00000221847 TLR9Q9NR96 1032 aa17.47■□□□□ 0.39
EBI3-201ENST00000221847 MARCH5Q9NX47 278 aa17.47■□□□□ 0.39
EBI3-201ENST00000221847 CPSF3Q9UKF6 684 aaKnown RBP17.47■□□□□ 0.39
EBI3-201ENST00000221847 REV3LO60673 3130 aa17.46■□□□□ 0.39
EBI3-201ENST00000221847 TTC26A0AVF1 554 aa17.46■□□□□ 0.39
EBI3-201ENST00000221847 LACTBL1A8MY62 500 aa17.46■□□□□ 0.39
EBI3-201ENST00000221847 PRPF40AO75400 957 aaKnown RBP17.46■□□□□ 0.39
EBI3-201ENST00000221847 KCNE1P15382 129 aa17.46■□□□□ 0.39
EBI3-201ENST00000221847 PNOCQ13519 176 aa17.46■□□□□ 0.39
EBI3-201ENST00000221847 TCEAL5Q5H9L2 206 aa17.46■□□□□ 0.39
EBI3-201ENST00000221847 DDX53Q86TM3 631 aaKnown RBP17.46■□□□□ 0.39
EBI3-201ENST00000221847 KIAA0895Q8NCT3 520 aa17.46■□□□□ 0.39
EBI3-201ENST00000221847 ZSWIM2Q8NEG5 633 aa17.46■□□□□ 0.39
EBI3-201ENST00000221847 CCDC34Q96HJ3 373 aa17.46■□□□□ 0.39
EBI3-201ENST00000221847 CBWD1Q9BRT8 395 aa17.46■□□□□ 0.39
EBI3-201ENST00000221847 COLEC11Q9BWP8 271 aa17.46■□□□□ 0.39
EBI3-201ENST00000221847 VN1R3Q9BXE9 311 aa17.46■□□□□ 0.39
EBI3-201ENST00000221847 NSUN3Q9H649 340 aaKnown RBP17.46■□□□□ 0.39
EBI3-201ENST00000221847 RPF1Q9H9Y2 349 aaKnown RBP17.46■□□□□ 0.39
EBI3-201ENST00000221847 CNTN3Q9P232 1028 aa17.46■□□□□ 0.39
EBI3-201ENST00000221847 CITO14578 2027 aa17.45■□□□□ 0.38
EBI3-201ENST00000221847 EYSQ5T1H1 3165 aa17.45■□□□□ 0.38
EBI3-201ENST00000221847 FSCN2O14926 492 aa17.45■□□□□ 0.38
EBI3-201ENST00000221847 GARTP22102 1010 aa17.45■□□□□ 0.38
EBI3-201ENST00000221847 SOX4Q06945 474 aaPredicted RBP17.45■□□□□ 0.38
EBI3-201ENST00000221847 SPAG1Q07617 926 aa17.45■□□□□ 0.38
EBI3-201ENST00000221847 SKIV2LQ15477 1246 aaKnown RBP17.45■□□□□ 0.38
EBI3-201ENST00000221847 CRELD2Q6UXH1 353 aaPredicted RBP17.45■□□□□ 0.38
EBI3-201ENST00000221847 TMC7Q7Z402 723 aa17.45■□□□□ 0.38
EBI3-201ENST00000221847 VPS52Q8N1B4 723 aa17.45■□□□□ 0.38
EBI3-201ENST00000221847 CCDC47Q96A33 483 aaKnown RBP17.45■□□□□ 0.38
EBI3-201ENST00000221847 C18orf25Q96B23 403 aaPredicted RBP17.45■□□□□ 0.38
EBI3-201ENST00000221847 FAM212AQ96EL1 285 aa17.45■□□□□ 0.38
EBI3-201ENST00000221847 TIGD1Q96MW7 591 aa17.45■□□□□ 0.38
EBI3-201ENST00000221847 TCF25Q9BQ70 676 aa17.45■□□□□ 0.38
EBI3-201ENST00000221847 PCIF1Q9H4Z3 704 aa17.45■□□□□ 0.38
EBI3-201ENST00000221847 PLEKHA5Q9HAU0 1116 aa17.45■□□□□ 0.38
EBI3-201ENST00000221847 GOLGA2P5Q9HBQ8 144 aa17.45■□□□□ 0.38
EBI3-201ENST00000221847 ENTPD7Q9NQZ7 604 aa17.45■□□□□ 0.38
EBI3-201ENST00000221847 ATG2AQ2TAZ0 1938 aa17.45■□□□□ 0.38
EBI3-201ENST00000221847 UBE4BO95155 1302 aa17.45■□□□□ 0.38
EBI3-201ENST00000221847 TGFB1I1O43294 461 aa17.44■□□□□ 0.38
EBI3-201ENST00000221847 RHOBTB3O94955 611 aa17.44■□□□□ 0.38
EBI3-201ENST00000221847 UBE2HP62256 183 aa17.44■□□□□ 0.38
EBI3-201ENST00000221847 PPP2R3AQ06190 1150 aa17.44■□□□□ 0.38
EBI3-201ENST00000221847 HSP90AA2PQ14568 343 aaPredicted RBP17.44■□□□□ 0.38
EBI3-201ENST00000221847 BMT2Q1RMZ1 405 aa17.44■□□□□ 0.38
EBI3-201ENST00000221847 PLPP4Q5VZY2 271 aa17.44■□□□□ 0.38
EBI3-201ENST00000221847 ARMCX5Q6P1M9 558 aa17.44■□□□□ 0.38
EBI3-201ENST00000221847 CLEC17AQ6ZS10 378 aa17.44■□□□□ 0.38
EBI3-201ENST00000221847 ADGRD2Q7Z7M1 963 aa17.44■□□□□ 0.38
EBI3-201ENST00000221847 SAAL1Q96ER3 474 aa17.44■□□□□ 0.38
EBI3-201ENST00000221847 FAM213AQ9BRX8 229 aa17.44■□□□□ 0.38
EBI3-201ENST00000221847 PRDM6Q9NQX0 595 aa17.44■□□□□ 0.38
EBI3-201ENST00000221847 SLC38A7Q9NVC3 462 aa17.44■□□□□ 0.38
EBI3-201ENST00000221847 PRUNE2Q8WUY3 3088 aa17.43■□□□□ 0.38
EBI3-201ENST00000221847 GOLGA8IPA6NC78 632 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms