RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 CTCFP49711 727 aaPredicted RBP11.25□□□□□ -0.61
VPS18-201ENST00000220509 ERFP50548 548 aa11.25□□□□□ -0.61
VPS18-201ENST00000220509 MFAP3P55082 362 aa11.25□□□□□ -0.61
VPS18-201ENST00000220509 LACTBP83111 547 aaPredicted RBP11.25□□□□□ -0.61
VPS18-201ENST00000220509 ANGEL2Q5VTE6 544 aaKnown RBP11.25□□□□□ -0.61
VPS18-201ENST00000220509 LCA5Q86VQ0 697 aa11.25□□□□□ -0.61
VPS18-201ENST00000220509 XXYLT1Q8NBI6 393 aa11.25□□□□□ -0.61
VPS18-201ENST00000220509 INO80BQ9C086 356 aaPredicted RBP11.25□□□□□ -0.61
VPS18-201ENST00000220509 PREBQ9HCU5 417 aa11.25□□□□□ -0.61
VPS18-201ENST00000220509 WDR64B1ANS9 1081 aa11.24□□□□□ -0.61
VPS18-201ENST00000220509 PSMC6P62333 389 aa11.24□□□□□ -0.61
VPS18-201ENST00000220509 SUPT20HL1Q3ZLR7 823 aa11.24□□□□□ -0.61
VPS18-201ENST00000220509 SWSAP1Q6NVH7 229 aa11.24□□□□□ -0.61
VPS18-201ENST00000220509 IRF2BP1Q8IU81 584 aa11.24□□□□□ -0.61
VPS18-201ENST00000220509 GDAP1Q8TB36 358 aa11.24□□□□□ -0.61
VPS18-201ENST00000220509 SNRNP27Q8WVK2 155 aaKnown RBP11.24□□□□□ -0.61
VPS18-201ENST00000220509 SHISA4Q96DD7 197 aa11.24□□□□□ -0.61
VPS18-201ENST00000220509 DEFB129Q9H1M3 183 aa11.24□□□□□ -0.61
VPS18-201ENST00000220509 IKBKGQ9Y6K9 419 aa11.24□□□□□ -0.61
VPS18-201ENST00000220509 LRRD1A4D1F6 860 aa11.24□□□□□ -0.61
VPS18-201ENST00000220509 DCDC2CA8MYV0 355 aa11.24□□□□□ -0.61
VPS18-201ENST00000220509 EVI5O60447 810 aa11.24□□□□□ -0.61
VPS18-201ENST00000220509 ANP32DO95626 131 aa11.24□□□□□ -0.61
VPS18-201ENST00000220509 MSL3P1P0C860 447 aa11.24□□□□□ -0.61
VPS18-201ENST00000220509 KLRC1P26715 233 aa11.24□□□□□ -0.61
VPS18-201ENST00000220509 PTK2Q05397 1052 aa11.24□□□□□ -0.61
VPS18-201ENST00000220509 ITIH3Q06033 890 aa11.24□□□□□ -0.61
VPS18-201ENST00000220509 SPRED3Q2MJR0 410 aa11.24□□□□□ -0.61
VPS18-201ENST00000220509 TAB3Q8N5C8 712 aaPredicted RBP11.24□□□□□ -0.61
VPS18-201ENST00000220509 GLIS3Q8NEA6 775 aa11.24□□□□□ -0.61
VPS18-201ENST00000220509 PRCCQ92733 491 aaPredicted RBP11.24□□□□□ -0.61
VPS18-201ENST00000220509 NACC2Q96BF6 587 aa11.24□□□□□ -0.61
VPS18-201ENST00000220509 PNMA5Q96PV4 448 aa11.24□□□□□ -0.61
VPS18-201ENST00000220509 TLR10Q9BXR5 811 aa11.24□□□□□ -0.61
VPS18-201ENST00000220509 PACSIN1Q9BY11 444 aa11.24□□□□□ -0.61
VPS18-201ENST00000220509 RAB17Q9H0T7 212 aa11.24□□□□□ -0.61
VPS18-201ENST00000220509 N4BP2Q86UW6 1770 aaPredicted RBP11.24□□□□□ -0.61
VPS18-201ENST00000220509 DENND3A2RUS2 1198 aa11.24□□□□□ -0.61
VPS18-201ENST00000220509 FGRP09769 529 aa11.24□□□□□ -0.61
VPS18-201ENST00000220509 SRGAP2CP0DJJ0 459 aa11.24□□□□□ -0.61
VPS18-201ENST00000220509 NFKBIAP25963 317 aa11.24□□□□□ -0.61
VPS18-201ENST00000220509 NSFP46459 744 aaKnown RBP11.24□□□□□ -0.61
VPS18-201ENST00000220509 DYNC1I2Q13409 638 aaKnown RBP11.24□□□□□ -0.61
VPS18-201ENST00000220509 BAATQ14032 418 aaPredicted RBP11.24□□□□□ -0.61
VPS18-201ENST00000220509 EPHA7Q15375 998 aa11.24□□□□□ -0.61
VPS18-201ENST00000220509 BZW1Q7L1Q6 419 aaKnown RBP11.24□□□□□ -0.61
VPS18-201ENST00000220509 ZBTB33Q86T24 672 aa11.24□□□□□ -0.61
VPS18-201ENST00000220509 SLC16A10Q8TF71 515 aa11.24□□□□□ -0.61
VPS18-201ENST00000220509 OSBPL7Q9BZF2 842 aa11.24□□□□□ -0.61
VPS18-201ENST00000220509 MTFR1LQ9H019 292 aa11.24□□□□□ -0.61
VPS18-201ENST00000220509 TAF1DQ9H5J8 278 aaPredicted RBP11.24□□□□□ -0.61
VPS18-201ENST00000220509 RNF181Q9P0P0 153 aa11.24□□□□□ -0.61
VPS18-201ENST00000220509 SALL4Q9UJQ4 1053 aa11.24□□□□□ -0.61
VPS18-201ENST00000220509 NKRFO15226 690 aaKnown RBP eCLIP11.23□□□□□ -0.61
VPS18-201ENST00000220509 ATF7P17544 494 aaPredicted RBP11.23□□□□□ -0.61
VPS18-201ENST00000220509 HALP42357 657 aa11.23□□□□□ -0.61
VPS18-201ENST00000220509 TAF11Q15544 211 aa11.23□□□□□ -0.61
VPS18-201ENST00000220509 ANKRD20A8PQ5CZ79 823 aa11.23□□□□□ -0.61
VPS18-201ENST00000220509 CYFIP1Q7L576 1253 aa11.23□□□□□ -0.61
VPS18-201ENST00000220509 SH3BP5LQ7L8J4 393 aa11.23□□□□□ -0.61
VPS18-201ENST00000220509 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.23□□□□□ -0.61
VPS18-201ENST00000220509 TEKT4Q8WW24 435 aa11.23□□□□□ -0.61
VPS18-201ENST00000220509 TRIM51Q9BSJ1 452 aa11.23□□□□□ -0.61
VPS18-201ENST00000220509 PAPPAQ13219 1627 aa11.23□□□□□ -0.61
VPS18-201ENST00000220509 KLRG2A4D1S0 409 aaPredicted RBP11.23□□□□□ -0.61
VPS18-201ENST00000220509 K7ERI5 159 aa11.23□□□□□ -0.61
VPS18-201ENST00000220509 PDXKO00764 312 aa11.23□□□□□ -0.61
VPS18-201ENST00000220509 UCHL3P15374 230 aa11.23□□□□□ -0.61
VPS18-201ENST00000220509 FNTAP49354 379 aa11.23□□□□□ -0.61
VPS18-201ENST00000220509 ATP11AP98196 1134 aa11.23□□□□□ -0.61
VPS18-201ENST00000220509 ZNF211Q13398 564 aaPredicted RBP11.23□□□□□ -0.61
VPS18-201ENST00000220509 CCDC6Q16204 474 aa11.23□□□□□ -0.61
VPS18-201ENST00000220509 NBPF12Q5TAG4 269 aaPredicted RBP11.23□□□□□ -0.61
VPS18-201ENST00000220509 KAZNQ674X7 775 aa11.23□□□□□ -0.61
VPS18-201ENST00000220509 CENPPQ6IPU0 288 aa11.23□□□□□ -0.61
VPS18-201ENST00000220509 INTS8Q75QN2 995 aaKnown RBP11.23□□□□□ -0.61
VPS18-201ENST00000220509 HAUS6Q7Z4H7 955 aa11.23□□□□□ -0.61
VPS18-201ENST00000220509 ZBTB8OSQ8IWT0 167 aa11.23□□□□□ -0.61
VPS18-201ENST00000220509 SLC7A5P1Q8MH63 180 aa11.23□□□□□ -0.61
VPS18-201ENST00000220509 NRBP2Q9NSY0 501 aa11.23□□□□□ -0.61
VPS18-201ENST00000220509 PCDHB4Q9Y5E5 795 aa11.23□□□□□ -0.61
VPS18-201ENST00000220509 ASTN2O75129 1339 aaPredicted RBP11.23□□□□□ -0.61
VPS18-201ENST00000220509 EMSYQ7Z589 1322 aa11.23□□□□□ -0.61
VPS18-201ENST00000220509 ATP2A1O14983 1001 aa11.23□□□□□ -0.61
VPS18-201ENST00000220509 TTI1O43156 1089 aa11.23□□□□□ -0.61
VPS18-201ENST00000220509 SART1O43290 800 aaKnown RBP11.23□□□□□ -0.61
VPS18-201ENST00000220509 EGFRP00533 1210 aa11.23□□□□□ -0.61
VPS18-201ENST00000220509 FGGP02679 453 aa11.23□□□□□ -0.61
VPS18-201ENST00000220509 TMEM191BP0C7N4 346 aa11.23□□□□□ -0.61
VPS18-201ENST00000220509 PSMD7P51665 324 aa11.23□□□□□ -0.61
VPS18-201ENST00000220509 SKOR1P84550 965 aa11.23□□□□□ -0.61
VPS18-201ENST00000220509 DENND2CQ68D51 928 aa11.23□□□□□ -0.61
VPS18-201ENST00000220509 GJB7Q6PEY0 223 aa11.23□□□□□ -0.61
VPS18-201ENST00000220509 FAM47EQ6ZV65 393 aa11.23□□□□□ -0.61
VPS18-201ENST00000220509 ERGIC2Q96RQ1 377 aa11.23□□□□□ -0.61
VPS18-201ENST00000220509 FAM213AQ9BRX8 229 aa11.23□□□□□ -0.61
VPS18-201ENST00000220509 RUSC1Q9BVN2 902 aa11.23□□□□□ -0.61
VPS18-201ENST00000220509 NSRP1Q9H0G5 558 aaKnown RBP11.23□□□□□ -0.61
VPS18-201ENST00000220509 DNAJC18Q9H819 358 aa11.23□□□□□ -0.61
VPS18-201ENST00000220509 TBC1D22BQ9NU19 505 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms