RNA–Protein interactions for RNA: ENST00000216456.6

VTI1B-201, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 1 (best)

Gene VTI1B, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-201ENST00000216456 AVPR2P30518 371 aa24.33■■□□□ 1.49
VTI1B-201ENST00000216456 SOX4Q06945 474 aaPredicted RBP24.33■■□□□ 1.49
VTI1B-201ENST00000216456 DCAF4L1Q3SXM0 396 aa24.33■■□□□ 1.49
VTI1B-201ENST00000216456 RILPL1Q5EBL4 403 aa24.33■■□□□ 1.49
VTI1B-201ENST00000216456 C3orf58Q8NDZ4 430 aa24.33■■□□□ 1.49
VTI1B-201ENST00000216456 CMASQ8NFW8 434 aaPredicted RBP24.33■■□□□ 1.49
VTI1B-201ENST00000216456 LNX1Q8TBB1 728 aaPredicted RBP24.33■■□□□ 1.49
VTI1B-201ENST00000216456 PPP1R10Q96QC0 940 aaKnown RBP24.33■■□□□ 1.49
VTI1B-201ENST00000216456 MYADMQ96S97 322 aa24.33■■□□□ 1.49
VTI1B-201ENST00000216456 PTPRHQ9HD43 1115 aa24.33■■□□□ 1.49
VTI1B-201ENST00000216456 ARHGAP28Q9P2N2 729 aa24.33■■□□□ 1.49
VTI1B-201ENST00000216456 TNFSF13BQ9Y275 285 aa24.33■■□□□ 1.49
VTI1B-201ENST00000216456 ABLIM1O14639 778 aa24.32■■□□□ 1.48
VTI1B-201ENST00000216456 HARSP12081 509 aaKnown RBP24.32■■□□□ 1.48
VTI1B-201ENST00000216456 CLCNKBP51801 687 aa24.32■■□□□ 1.48
VTI1B-201ENST00000216456 OTOP3Q7RTS5 596 aa24.32■■□□□ 1.48
VTI1B-201ENST00000216456 PLCD3Q8N3E9 789 aa24.32■■□□□ 1.48
VTI1B-201ENST00000216456 TTPALQ9BTX7 342 aa24.32■■□□□ 1.48
VTI1B-201ENST00000216456 NT5C3AQ9H0P0 336 aa24.32■■□□□ 1.48
VTI1B-201ENST00000216456 WDR6Q9NNW5 1121 aaKnown RBP24.32■■□□□ 1.48
VTI1B-201ENST00000216456 KMT5AQ9NQR1 393 aa24.32■■□□□ 1.48
VTI1B-201ENST00000216456 FNIP2Q9P278 1114 aa24.32■■□□□ 1.48
VTI1B-201ENST00000216456 PHLPP2Q6ZVD8 1323 aa24.32■■□□□ 1.48
VTI1B-201ENST00000216456 NARSO43776 548 aaKnown RBP24.31■■□□□ 1.48
VTI1B-201ENST00000216456 GBP2P32456 591 aaPredicted RBP24.31■■□□□ 1.48
VTI1B-201ENST00000216456 BRCC3P46736 316 aa24.31■■□□□ 1.48
VTI1B-201ENST00000216456 GRIN1Q05586 938 aa24.31■■□□□ 1.48
VTI1B-201ENST00000216456 DMP1Q13316 513 aaPredicted RBP24.31■■□□□ 1.48
VTI1B-201ENST00000216456 PSMD5Q16401 504 aa24.31■■□□□ 1.48
VTI1B-201ENST00000216456 ZNF568Q3ZCX4 644 aa24.31■■□□□ 1.48
VTI1B-201ENST00000216456 SEZ6Q53EL9 994 aa24.31■■□□□ 1.48
VTI1B-201ENST00000216456 RSPO2Q6UXX9 243 aaPredicted RBP24.31■■□□□ 1.48
VTI1B-201ENST00000216456 UBALD2Q8IYN6 164 aa24.31■■□□□ 1.48
VTI1B-201ENST00000216456 ACSF2Q96CM8 615 aaPredicted RBP24.31■■□□□ 1.48
VTI1B-201ENST00000216456 ZMAT2Q96NC0 199 aaKnown RBP24.31■■□□□ 1.48
VTI1B-201ENST00000216456 TBC1D32Q96NH3 1257 aa24.31■■□□□ 1.48
VTI1B-201ENST00000216456 KCNK12Q9HB15 430 aa24.31■■□□□ 1.48
VTI1B-201ENST00000216456 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.31■■□□□ 1.485e-7■■■■□ 24.2
VTI1B-201ENST00000216456 FAM86C1Q9NVL1 165 aa24.31■■□□□ 1.48
VTI1B-201ENST00000216456 SMC3Q9UQE7 1217 aa24.31■■□□□ 1.48
VTI1B-201ENST00000216456 KIF3AQ9Y496 699 aa24.31■■□□□ 1.48
VTI1B-201ENST00000216456 CLUHO75153 1309 aa24.31■■□□□ 1.48
VTI1B-201ENST00000216456 VWA8A3KMH1 1905 aa24.3■■□□□ 1.48
VTI1B-201ENST00000216456 SMIM28A0A1B0GU29 152 aa24.3■■□□□ 1.48
VTI1B-201ENST00000216456 MRE11P49959 708 aa24.3■■□□□ 1.48
VTI1B-201ENST00000216456 NTHL1P78549 312 aa24.3■■□□□ 1.48
VTI1B-201ENST00000216456 PIK3R5Q8WYR1 880 aa24.3■■□□□ 1.48
VTI1B-201ENST00000216456 KCNH6Q9H252 994 aa24.3■■□□□ 1.48
VTI1B-201ENST00000216456 STK24Q9Y6E0 443 aa24.3■■□□□ 1.48
VTI1B-201ENST00000216456 TRIP11Q15643 1979 aa24.29■■□□□ 1.48
VTI1B-201ENST00000216456 B3GAT3O94766 335 aa24.29■■□□□ 1.48
VTI1B-201ENST00000216456 GRM5P41594 1212 aa24.29■■□□□ 1.48
VTI1B-201ENST00000216456 SLC12A3P55017 1021 aa24.29■■□□□ 1.48
VTI1B-201ENST00000216456 HYIQ5T013 277 aa24.29■■□□□ 1.48
VTI1B-201ENST00000216456 TMEM105Q8N8V8 129 aa24.29■■□□□ 1.48
VTI1B-201ENST00000216456 DRC1Q96MC2 740 aa24.29■■□□□ 1.48
VTI1B-201ENST00000216456 MRPL4Q9BYD3 311 aaKnown RBP24.29■■□□□ 1.48
VTI1B-201ENST00000216456 TMEM134Q9H6X4 195 aa24.29■■□□□ 1.48
VTI1B-201ENST00000216456 PIDD1Q9HB75 910 aa24.29■■□□□ 1.48
VTI1B-201ENST00000216456 PLA2G4BP0C869 781 aa24.28■■□□□ 1.48
VTI1B-201ENST00000216456 PROZP22891 400 aa24.28■■□□□ 1.48
VTI1B-201ENST00000216456 TKTP29401 623 aaKnown RBP24.28■■□□□ 1.48
VTI1B-201ENST00000216456 TMEM119Q4V9L6 283 aa24.28■■□□□ 1.48
VTI1B-201ENST00000216456 ARSHQ5FYA8 562 aa24.28■■□□□ 1.48
VTI1B-201ENST00000216456 LARP1BQ659C4 914 aaKnown RBP24.28■■□□□ 1.48
VTI1B-201ENST00000216456 ALKAL1Q6UXT8 129 aa24.28■■□□□ 1.48
VTI1B-201ENST00000216456 GET4Q7L5D6 327 aaPredicted RBP24.28■■□□□ 1.48
VTI1B-201ENST00000216456 SYT2Q8N9I0 419 aaPredicted RBP24.28■■□□□ 1.48
VTI1B-201ENST00000216456 C18orf25Q96B23 403 aaPredicted RBP24.28■■□□□ 1.48
VTI1B-201ENST00000216456 PRKD2Q9BZL6 878 aa24.28■■□□□ 1.48
VTI1B-201ENST00000216456 PLEKHA4Q9H4M7 779 aa24.28■■□□□ 1.48
VTI1B-201ENST00000216456 FBXW11Q9UKB1 542 aa24.28■■□□□ 1.48
VTI1B-201ENST00000216456 DOCK6Q96HP0 2047 aa24.28■■□□□ 1.48
VTI1B-201ENST00000216456 ZMYND10O75800 440 aa24.27■■□□□ 1.48
VTI1B-201ENST00000216456 GUCY2CP25092 1073 aa24.27■■□□□ 1.48
VTI1B-201ENST00000216456 UPP1Q16831 310 aa24.27■■□□□ 1.48
VTI1B-201ENST00000216456 GPR65Q8IYL9 337 aa24.27■■□□□ 1.48
VTI1B-201ENST00000216456 TMEM161BQ8NDZ6 487 aa24.27■■□□□ 1.48
VTI1B-201ENST00000216456 TCHPQ9BT92 498 aa24.27■■□□□ 1.48
VTI1B-201ENST00000216456 HAPLN2Q9GZV7 340 aa24.27■■□□□ 1.48
VTI1B-201ENST00000216456 PIEZO1Q92508 2521 aa24.27■■□□□ 1.48
VTI1B-201ENST00000216456 CCL16O15467 120 aa24.26■■□□□ 1.47
VTI1B-201ENST00000216456 FGFR3P22607 806 aa24.26■■□□□ 1.47
VTI1B-201ENST00000216456 OR1D2P34982 312 aa24.26■■□□□ 1.47
VTI1B-201ENST00000216456 TDGQ13569 410 aa24.26■■□□□ 1.47
VTI1B-201ENST00000216456 DHX8Q14562 1220 aaKnown RBP24.26■■□□□ 1.47
VTI1B-201ENST00000216456 XKR4Q5GH76 650 aa24.26■■□□□ 1.47
VTI1B-201ENST00000216456 GRASPQ7Z6J2 395 aaPredicted RBP24.26■■□□□ 1.47
VTI1B-201ENST00000216456 HDAC7Q8WUI4 952 aa24.26■■□□□ 1.47
VTI1B-201ENST00000216456 SNX27Q96L92 541 aa24.26■■□□□ 1.47
VTI1B-201ENST00000216456 CCDC94Q9BW85 323 aaPredicted RBP24.26■■□□□ 1.47
VTI1B-201ENST00000216456 UPF2Q9HAU5 1272 aaKnown RBP24.26■■□□□ 1.47
VTI1B-201ENST00000216456 ZDHHC7Q9NXF8 308 aa24.26■■□□□ 1.47
VTI1B-201ENST00000216456 ANKFY1Q9P2R3 1169 aa24.26■■□□□ 1.47
VTI1B-201ENST00000216456 MTCL1Q9Y4B5 1905 aaKnown RBP24.25■■□□□ 1.47
VTI1B-201ENST00000216456 PAPLNO95428 1278 aa24.25■■□□□ 1.47
VTI1B-201ENST00000216456 MAPTP10636 758 aaKnown RBP24.25■■□□□ 1.47
VTI1B-201ENST00000216456 PLS3P13797 630 aa24.25■■□□□ 1.47
VTI1B-201ENST00000216456 CWF19L1Q69YN2 538 aaKnown RBP24.25■■□□□ 1.47
VTI1B-201ENST00000216456 DCLRE1AQ6PJP8 1040 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms