RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 RUNDC3BQ96NL0 473 aa17.85■□□□□ 0.45
CTDP1-201ENST00000075430 CYTH2Q99418 400 aa17.85■□□□□ 0.45
CTDP1-201ENST00000075430 COA1Q9GZY4 146 aa17.85■□□□□ 0.45
CTDP1-201ENST00000075430 DPPA5A6NC42 116 aa17.85■□□□□ 0.45
CTDP1-201ENST00000075430 CHRM1P11229 460 aaPredicted RBP17.85■□□□□ 0.45
CTDP1-201ENST00000075430 IL1R1P14778 569 aa17.85■□□□□ 0.45
CTDP1-201ENST00000075430 RRM1P23921 792 aa17.85■□□□□ 0.45
CTDP1-201ENST00000075430 TUBP50607 506 aa17.85■□□□□ 0.45
CTDP1-201ENST00000075430 VAMP7P51809 220 aa17.85■□□□□ 0.45
CTDP1-201ENST00000075430 ZNF268Q14587 947 aaPredicted RBP17.85■□□□□ 0.45
CTDP1-201ENST00000075430 IZUMO3Q5VZ72 239 aa17.85■□□□□ 0.45
CTDP1-201ENST00000075430 CBWD2Q8IUF1 395 aa17.85■□□□□ 0.45
CTDP1-201ENST00000075430 L3MBTL3Q96JM7 780 aaPredicted RBP17.85■□□□□ 0.45
CTDP1-201ENST00000075430 TXLNGYQ9BZA5 131 aa17.85■□□□□ 0.45
CTDP1-201ENST00000075430 SLITRK3O94933 977 aa17.85■□□□□ 0.45
CTDP1-201ENST00000075430 GAS8O95995 478 aa17.85■□□□□ 0.45
CTDP1-201ENST00000075430 APBA3O96018 575 aa17.85■□□□□ 0.45
CTDP1-201ENST00000075430 GBP1P32455 592 aa17.85■□□□□ 0.45
CTDP1-201ENST00000075430 LRRC8CQ8TDW0 803 aa17.85■□□□□ 0.45
CTDP1-201ENST00000075430 C11orf70Q9BRQ4 267 aa17.85■□□□□ 0.45
CTDP1-201ENST00000075430 GPR88Q9GZN0 384 aa17.85■□□□□ 0.45
CTDP1-201ENST00000075430 EBF2Q9HAK2 575 aa17.85■□□□□ 0.45
CTDP1-201ENST00000075430 NINJ2Q9NZG7 142 aa17.85■□□□□ 0.45
CTDP1-201ENST00000075430 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.85■□□□□ 0.45
CTDP1-201ENST00000075430 PITPNM2Q9BZ72 1349 aa17.84■□□□□ 0.45
CTDP1-201ENST00000075430 A0A0A6YYK5 440 aaPredicted RBP17.84■□□□□ 0.45
CTDP1-201ENST00000075430 BTNL10A8MVZ5 291 aa17.84■□□□□ 0.45
CTDP1-201ENST00000075430 PPP1R12AO14974 1030 aaPredicted RBP17.84■□□□□ 0.45
CTDP1-201ENST00000075430 EYA4O95677 639 aa17.84■□□□□ 0.45
CTDP1-201ENST00000075430 ARP10275 920 aa17.84■□□□□ 0.45
CTDP1-201ENST00000075430 BNIP1Q12981 228 aa17.84■□□□□ 0.45
CTDP1-201ENST00000075430 PKN2Q16513 984 aaKnown RBP17.84■□□□□ 0.45
CTDP1-201ENST00000075430 ETNPPLQ8TBG4 499 aa17.84■□□□□ 0.45
CTDP1-201ENST00000075430 CENPTQ96BT3 561 aa17.84■□□□□ 0.45
CTDP1-201ENST00000075430 RBM15Q96T37 977 aaKnown RBP eCLIP17.84■□□□□ 0.453e-8■■■■■ 27.6
CTDP1-201ENST00000075430 CCDC77Q9BR77 488 aa17.84■□□□□ 0.45
CTDP1-201ENST00000075430 PHTF1Q9UMS5 762 aa17.84■□□□□ 0.45
CTDP1-201ENST00000075430 RTN2O75298 545 aa17.84■□□□□ 0.45
CTDP1-201ENST00000075430 IL9RQ01113 521 aa17.84■□□□□ 0.45
CTDP1-201ENST00000075430 ABCB5Q2M3G0 1257 aa17.84■□□□□ 0.45
CTDP1-201ENST00000075430 TMEM154Q6P9G4 183 aa17.84■□□□□ 0.45
CTDP1-201ENST00000075430 ARHGEF18Q6ZSZ5 1173 aa17.84■□□□□ 0.45
CTDP1-201ENST00000075430 ZC3H18Q86VM9 953 aaKnown RBP17.84■□□□□ 0.45
CTDP1-201ENST00000075430 AAASQ9NRG9 546 aa17.84■□□□□ 0.45
CTDP1-201ENST00000075430 LRRC36Q1X8D7 754 aa17.84■□□□□ 0.45
CTDP1-201ENST00000075430 P3H1Q32P28 736 aa17.84■□□□□ 0.45
CTDP1-201ENST00000075430 ZNF720Q7Z2F6 126 aa17.84■□□□□ 0.45
CTDP1-201ENST00000075430 LXNQ9BS40 222 aa17.84■□□□□ 0.45
CTDP1-201ENST00000075430 ZNF577Q9BSK1 485 aa17.84■□□□□ 0.45
CTDP1-201ENST00000075430 STRCQ7RTU9 1775 aa17.83■□□□□ 0.45
CTDP1-201ENST00000075430 MAP3K13O43283 966 aa17.83■□□□□ 0.45
CTDP1-201ENST00000075430 TTC4O95801 387 aa17.83■□□□□ 0.45
CTDP1-201ENST00000075430 PLS3P13797 630 aa17.83■□□□□ 0.45
CTDP1-201ENST00000075430 RFC5P40937 340 aa17.83■□□□□ 0.45
CTDP1-201ENST00000075430 PIK3CAP42336 1068 aa17.83■□□□□ 0.45
CTDP1-201ENST00000075430 CLK2P49760 499 aaKnown RBP17.83■□□□□ 0.45
CTDP1-201ENST00000075430 SPIRE1Q08AE8 756 aa17.83■□□□□ 0.45
CTDP1-201ENST00000075430 ZNF394Q53GI3 561 aa17.83■□□□□ 0.45
CTDP1-201ENST00000075430 GLIS1Q8NBF1 620 aa17.83■□□□□ 0.45
CTDP1-201ENST00000075430 RPS6KC1Q96S38 1066 aa17.83■□□□□ 0.45
CTDP1-201ENST00000075430 RXFP1Q9HBX9 757 aa17.83■□□□□ 0.45
CTDP1-201ENST00000075430 ANKRD36CQ5JPF3 1778 aa17.83■□□□□ 0.44
CTDP1-201ENST00000075430 A0A1W2PPM1 405 aa17.83■□□□□ 0.44
CTDP1-201ENST00000075430 GSTA1P08263 222 aa17.83■□□□□ 0.44
CTDP1-201ENST00000075430 FAM102BQ5T8I3 360 aa17.83■□□□□ 0.44
CTDP1-201ENST00000075430 RNF220Q5VTB9 566 aa17.83■□□□□ 0.44
CTDP1-201ENST00000075430 AP1ARQ63HQ0 302 aa17.83■□□□□ 0.44
CTDP1-201ENST00000075430 MTDHQ86UE4 582 aaKnown RBP17.83■□□□□ 0.44
CTDP1-201ENST00000075430 CSRNP1Q96S65 589 aa17.83■□□□□ 0.44
CTDP1-201ENST00000075430 SLC5A4Q9NY91 659 aa17.83■□□□□ 0.44
CTDP1-201ENST00000075430 SAE1Q9UBE0 346 aaPredicted RBP17.83■□□□□ 0.44
CTDP1-201ENST00000075430 CCDC88AQ3V6T2 1871 aa17.83■□□□□ 0.44
CTDP1-201ENST00000075430 MIF4GDA9UHW6 222 aaKnown RBP17.82■□□□□ 0.44
CTDP1-201ENST00000075430 ECE1P42892 770 aa17.82■□□□□ 0.44
CTDP1-201ENST00000075430 PPP2R5EQ16537 467 aa17.82■□□□□ 0.44
CTDP1-201ENST00000075430 AOC3Q16853 763 aa17.82■□□□□ 0.44
CTDP1-201ENST00000075430 TAF1BQ53T94 588 aaPredicted RBP17.82■□□□□ 0.44
CTDP1-201ENST00000075430 RFWD3Q6PCD5 774 aa17.82■□□□□ 0.44
CTDP1-201ENST00000075430 ZBED8Q8IZ13 594 aa17.82■□□□□ 0.44
CTDP1-201ENST00000075430 EIF1ADQ8N9N8 165 aaKnown RBP17.82■□□□□ 0.44
CTDP1-201ENST00000075430 SRRM3A6NNA2 597 aaPredicted RBP17.82■□□□□ 0.44
CTDP1-201ENST00000075430 ZBED4O75132 1171 aa17.82■□□□□ 0.44
CTDP1-201ENST00000075430 RAD17O75943 681 aa17.82■□□□□ 0.44
CTDP1-201ENST00000075430 GNAT1P11488 350 aa17.82■□□□□ 0.44
CTDP1-201ENST00000075430 NPEPPSP55786 919 aa17.82■□□□□ 0.44
CTDP1-201ENST00000075430 MTMR2Q13614 643 aa17.82■□□□□ 0.44
CTDP1-201ENST00000075430 CGB2Q6NT52 195 aa17.82■□□□□ 0.44
CTDP1-201ENST00000075430 ZNF483Q8TF39 744 aaPredicted RBP17.82■□□□□ 0.44
CTDP1-201ENST00000075430 UCMAQ8WVF2 138 aa17.82■□□□□ 0.44
CTDP1-201ENST00000075430 CKAP2Q8WWK9 683 aa17.82■□□□□ 0.44
CTDP1-201ENST00000075430 BICD1Q96G01 975 aa17.82■□□□□ 0.44
CTDP1-201ENST00000075430 TSC22D3Q99576 134 aa17.82■□□□□ 0.44
CTDP1-201ENST00000075430 TBC1D10AQ9BXI6 508 aa17.82■□□□□ 0.44
CTDP1-201ENST00000075430 CPSF2Q9P2I0 782 aaKnown RBP17.82■□□□□ 0.44
CTDP1-201ENST00000075430 BAG2O95816 211 aa17.82■□□□□ 0.44
CTDP1-201ENST00000075430 CYP3A4P08684 503 aa17.82■□□□□ 0.44
CTDP1-201ENST00000075430 ZCCHC18P0CG32 403 aa17.82■□□□□ 0.44
CTDP1-201ENST00000075430 RPA3P35244 121 aaPredicted RBP17.82■□□□□ 0.44
CTDP1-201ENST00000075430 WDR4P57081 412 aaKnown RBP17.82■□□□□ 0.44
CTDP1-201ENST00000075430 STRN3Q13033 797 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms