RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 MPZL3Q6UWV2 235 aa15.42■□□□□ 0.06
RTFDC1-201ENST00000023939 NOP9Q86U38 636 aaKnown RBP15.42■□□□□ 0.06
RTFDC1-201ENST00000023939 WDR49Q8IV35 697 aa15.42■□□□□ 0.06
RTFDC1-201ENST00000023939 SYCE1Q8N0S2 351 aa15.42■□□□□ 0.06
RTFDC1-201ENST00000023939 NOA1Q8NC60 698 aaKnown RBP15.42■□□□□ 0.06
RTFDC1-201ENST00000023939 SLC20A1Q8WUM9 679 aa15.42■□□□□ 0.06
RTFDC1-201ENST00000023939 UBE2Q2Q8WVN8 375 aa15.42■□□□□ 0.06
RTFDC1-201ENST00000023939 CTNNBL1Q8WYA6 563 aaPredicted RBP15.42■□□□□ 0.06
RTFDC1-201ENST00000023939 TATDN2Q93075 761 aa15.42■□□□□ 0.06
RTFDC1-201ENST00000023939 CPSF3Q9UKF6 684 aaKnown RBP15.42■□□□□ 0.06
RTFDC1-201ENST00000023939 TNFSF13BQ9Y275 285 aa15.42■□□□□ 0.06
RTFDC1-201ENST00000023939 MYH10P35580 1976 aa15.41■□□□□ 0.06
RTFDC1-201ENST00000023939 CCDC151A5D8V7 595 aa15.41■□□□□ 0.06
RTFDC1-201ENST00000023939 H3BRB1 525 aa15.41■□□□□ 0.06
RTFDC1-201ENST00000023939 CYP26A1O43174 497 aa15.41■□□□□ 0.06
RTFDC1-201ENST00000023939 SGPL1O95470 568 aa15.41■□□□□ 0.06
RTFDC1-201ENST00000023939 MMP3P08254 477 aa15.41■□□□□ 0.06
RTFDC1-201ENST00000023939 CYP11B1P15538 503 aa15.41■□□□□ 0.06
RTFDC1-201ENST00000023939 YY1P25490 414 aa15.41■□□□□ 0.06
RTFDC1-201ENST00000023939 PHKA2P46019 1235 aa15.41■□□□□ 0.06
RTFDC1-201ENST00000023939 ZNF157P51786 506 aaPredicted RBP15.41■□□□□ 0.06
RTFDC1-201ENST00000023939 CLCN3P51790 818 aa15.41■□□□□ 0.06
RTFDC1-201ENST00000023939 CDR2Q01850 454 aa15.41■□□□□ 0.06
RTFDC1-201ENST00000023939 RPUSD2Q8IZ73 545 aaKnown RBP15.41■□□□□ 0.06
RTFDC1-201ENST00000023939 MMGT1Q8N4V1 131 aa15.41■□□□□ 0.06
RTFDC1-201ENST00000023939 CAGE1Q8TC20 777 aa15.41■□□□□ 0.06
RTFDC1-201ENST00000023939 USP6NLQ92738 828 aa15.41■□□□□ 0.06
RTFDC1-201ENST00000023939 TUT1Q9H6E5 874 aaKnown RBP15.41■□□□□ 0.06
RTFDC1-201ENST00000023939 PRMT7Q9NVM4 692 aaPredicted RBP15.41■□□□□ 0.06
RTFDC1-201ENST00000023939 CPA4Q9UI42 421 aa15.41■□□□□ 0.06
RTFDC1-201ENST00000023939 TARSL2A2RTX5 802 aaKnown RBP15.4■□□□□ 0.06
RTFDC1-201ENST00000023939 NCK2O43639 380 aa15.4■□□□□ 0.06
RTFDC1-201ENST00000023939 RTN2O75298 545 aa15.4■□□□□ 0.06
RTFDC1-201ENST00000023939 FTCDO95954 541 aa15.4■□□□□ 0.06
RTFDC1-201ENST00000023939 PIK3CAP42336 1068 aa15.4■□□□□ 0.06
RTFDC1-201ENST00000023939 NOP2P46087 812 aaKnown RBP15.4■□□□□ 0.06
RTFDC1-201ENST00000023939 DGKDQ16760 1214 aa15.4■□□□□ 0.06
RTFDC1-201ENST00000023939 ATF7IP2Q5U623 682 aa15.4■□□□□ 0.06
RTFDC1-201ENST00000023939 RGMBQ6NW40 437 aa15.4■□□□□ 0.06
RTFDC1-201ENST00000023939 C17orf99Q6UX52 265 aa15.4■□□□□ 0.06
RTFDC1-201ENST00000023939 PALB2Q86YC2 1186 aa15.4■□□□□ 0.06
RTFDC1-201ENST00000023939 RHOT2Q8IXI1 618 aa15.4■□□□□ 0.06
RTFDC1-201ENST00000023939 METTL13Q8N6R0 699 aa15.4■□□□□ 0.06
RTFDC1-201ENST00000023939 HNRNPLLQ8WVV9 542 aaKnown RBP15.4■□□□□ 0.06
RTFDC1-201ENST00000023939 DDX1Q92499 740 aaKnown RBP15.4■□□□□ 0.06
RTFDC1-201ENST00000023939 CAPZA3Q96KX2 299 aa15.4■□□□□ 0.06
RTFDC1-201ENST00000023939 NLRP4Q96MN2 994 aa15.4■□□□□ 0.06
RTFDC1-201ENST00000023939 TCHPQ9BT92 498 aa15.4■□□□□ 0.06
RTFDC1-201ENST00000023939 EPC1Q9H2F5 836 aa15.4■□□□□ 0.06
RTFDC1-201ENST00000023939 IFT122Q9HBG6 1241 aa15.4■□□□□ 0.06
RTFDC1-201ENST00000023939 CNTN6Q9UQ52 1028 aa15.4■□□□□ 0.06
RTFDC1-201ENST00000023939 STXBP5LQ9Y2K9 1186 aa15.4■□□□□ 0.06
RTFDC1-201ENST00000023939 ZSWIM8A7E2V4 1837 aa15.4■□□□□ 0.06
RTFDC1-201ENST00000023939 ATP8B1O43520 1251 aa15.4■□□□□ 0.06
RTFDC1-201ENST00000023939 ZRANB2O95218 330 aaKnown RBP eCLIP15.4■□□□□ 0.06
RTFDC1-201ENST00000023939 TBXAS1P24557 533 aaPredicted RBP15.4■□□□□ 0.06
RTFDC1-201ENST00000023939 TMOD1P28289 359 aa15.4■□□□□ 0.06
RTFDC1-201ENST00000023939 USP8P40818 1118 aa15.4■□□□□ 0.06
RTFDC1-201ENST00000023939 PDE6CP51160 858 aa15.4■□□□□ 0.06
RTFDC1-201ENST00000023939 BPIFB4P59827 614 aa15.4■□□□□ 0.06
RTFDC1-201ENST00000023939 FMO1Q01740 532 aa15.4■□□□□ 0.06
RTFDC1-201ENST00000023939 BIRC3Q13489 604 aa15.4■□□□□ 0.06
RTFDC1-201ENST00000023939 RPS6KA1Q15418 735 aa15.4■□□□□ 0.06
RTFDC1-201ENST00000023939 TAF1CQ15572 869 aaPredicted RBP15.4■□□□□ 0.06
RTFDC1-201ENST00000023939 WDR93Q6P2C0 686 aa15.4■□□□□ 0.06
RTFDC1-201ENST00000023939 MTHFD1LQ6UB35 978 aa15.4■□□□□ 0.06
RTFDC1-201ENST00000023939 TMCO3Q6UWJ1 677 aa15.4■□□□□ 0.06
RTFDC1-201ENST00000023939 SAPCD2Q86UD0 394 aa15.4■□□□□ 0.06
RTFDC1-201ENST00000023939 SLC47A2Q86VL8 602 aa15.4■□□□□ 0.06
RTFDC1-201ENST00000023939 ZNF677Q86XU0 584 aa15.4■□□□□ 0.06
RTFDC1-201ENST00000023939 OR6J1Q8NGC5 347 aa15.4■□□□□ 0.06
RTFDC1-201ENST00000023939 PCDHB18PQ96TA0 734 aa15.4■□□□□ 0.06
RTFDC1-201ENST00000023939 PI4K2AQ9BTU6 479 aa15.4■□□□□ 0.06
RTFDC1-201ENST00000023939 CCDC94Q9BW85 323 aaPredicted RBP15.4■□□□□ 0.06
RTFDC1-201ENST00000023939 ABCB6Q9NP58 842 aa15.4■□□□□ 0.06
RTFDC1-201ENST00000023939 ZNF446Q9NWS9 450 aa15.4■□□□□ 0.06
RTFDC1-201ENST00000023939 TAS2R14Q9NYV8 317 aa15.4■□□□□ 0.06
RTFDC1-201ENST00000023939 ZHX1Q9UKY1 873 aaPredicted RBP15.4■□□□□ 0.06
RTFDC1-201ENST00000023939 A6NJR5 290 aa15.39■□□□□ 0.05
RTFDC1-201ENST00000023939 INO80B-WBP1J3KQ70 363 aa15.39■□□□□ 0.05
RTFDC1-201ENST00000023939 B4GALT4O60513 344 aa15.39■□□□□ 0.05
RTFDC1-201ENST00000023939 MTA2O94776 668 aa15.39■□□□□ 0.05
RTFDC1-201ENST00000023939 KIF4AO95239 1232 aa15.39■□□□□ 0.05
RTFDC1-201ENST00000023939 IGHA2P01877 340 aa15.39■□□□□ 0.05
RTFDC1-201ENST00000023939 FTLP02792 175 aaPredicted RBP15.39■□□□□ 0.05
RTFDC1-201ENST00000023939 SLC10A3P09131 477 aa15.39■□□□□ 0.05
RTFDC1-201ENST00000023939 ZNF286BP0CG31 522 aa15.39■□□□□ 0.05
RTFDC1-201ENST00000023939 PAFAH1B1P43034 410 aa15.39■□□□□ 0.05
RTFDC1-201ENST00000023939 TNFAIP2Q03169 654 aa15.39■□□□□ 0.05
RTFDC1-201ENST00000023939 CFAP221Q4G0U5 840 aa15.39■□□□□ 0.05
RTFDC1-201ENST00000023939 OLFML2BQ68BL8 750 aa15.39■□□□□ 0.05
RTFDC1-201ENST00000023939 LMBRD2Q68DH5 695 aaPredicted RBP15.39■□□□□ 0.05
RTFDC1-201ENST00000023939 DNAAF5Q86Y56 855 aa15.39■□□□□ 0.05
RTFDC1-201ENST00000023939 OR5B17Q8NGF7 314 aa15.39■□□□□ 0.05
RTFDC1-201ENST00000023939 SLC35G2Q8TBE7 412 aa15.39■□□□□ 0.05
RTFDC1-201ENST00000023939 PBKQ96KB5 322 aa15.39■□□□□ 0.05
RTFDC1-201ENST00000023939 INO80BQ9C086 356 aaPredicted RBP15.39■□□□□ 0.05
RTFDC1-201ENST00000023939 GNEQ9Y223 722 aaKnown RBP15.39■□□□□ 0.05
RTFDC1-201ENST00000023939 RRN3P2A6NIE6 340 aa15.38■□□□□ 0.05
RTFDC1-201ENST00000023939 GJB1P08034 283 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 274.6 ms