RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 Ggps1Q9WTN0 300 aa14.27□□□□□ -0.12
Pdlim5-208ENSMUST00000196220 Robo3Q9Z2I4 1366 aa14.27□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Disp2Q8CIP5 1345 aa14.27□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Spata31d1dE9Q5W2 1247 aa14.27□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Pitpnm1O35954 1243 aa14.27□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Ptp4a2O70274 167 aa14.27□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Apba3O88888 571 aa14.27□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Mt-CybP00158 381 aa14.27□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Mgat1P27808 447 aa14.27□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Rhox5P52651 210 aa14.27□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Grm2Q14BI2 872 aa14.27□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Ttll12Q3UDE2 639 aa14.27□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Fndc3bQ6NWW9 1207 aaKnown RBP14.27□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 SpopQ6ZWS8 374 aa14.27□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Tcp10aQ80W76 438 aa14.27□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Pkn2Q8BWW9 983 aa14.27□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 OgtQ8CGY8 1046 aa14.27□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Ube2q2Q8K2Z8 378 aa14.27□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Senp2Q91ZX6 588 aa14.27□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Cdca7Q9D0M2 382 aa14.27□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Rnf14Q9JI90 485 aa14.27□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Prdm15E9Q8T2 1174 aa14.26□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Nr3c1P06537 783 aa14.26□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 NsfP46460 744 aa14.26□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Il6stQ00560 917 aa14.26□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 VegfaQ00731 214 aa14.26□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 SpoplQ2M2N2 392 aa14.26□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 MlxipQ2VPU4 917 aa14.26□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Tmem63bQ3TWI9 832 aa14.26□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Palb2Q3U0P1 1104 aa14.26□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Slc16a10Q3U9N9 512 aa14.26□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Bbof1Q3V079 533 aa14.26□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Znf583Q3V080 568 aa14.26□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Sh2d1b2Q45HK4 132 aa14.26□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Sema5aQ62217 1077 aa14.26□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Vps72Q62481 368 aa14.26□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Tspyl5Q69ZB3 406 aa14.26□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Fnbp1Q80TY0 616 aa14.26□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Ankfy1Q810B6 1169 aa14.26□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Erlin2Q8BFZ9 340 aa14.26□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Rassf2Q8BMS9 326 aa14.26□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Slc38a7Q8BWH0 463 aa14.26□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 C130026I21RikQ8C898 291 aa14.26□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 A430089I19RikQ8C9W1 407 aa14.26□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 ClasrpQ8CFC7 668 aa14.26□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Vmn1r64Q8R2B8 320 aa14.26□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Plcb4Q91UZ1 1175 aa14.26□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Mettl13Q91YR5 698 aa14.26□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Ddx47Q9CWX9 455 aaKnown RBP14.26□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Dydc1Q9D9T0 175 aa14.26□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 IdeQ9JHR7 1019 aa14.26□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Cwc15Q9JHS9 229 aaKnown RBP14.26□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Edf1Q9JMG1 148 aaKnown RBP14.26□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Bpifb9bA2AJD1 591 aa14.25□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Zfp174B9EJW5 407 aa14.25□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Pdzrn4E9PUZ9 1014 aa14.25□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 GclmO09172 274 aaKnown RBP14.25□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 PrphP15331 475 aa14.25□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Cetn1P41209 172 aa14.25□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Ephb4P54761 987 aa14.25□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Hmgcs2P54869 508 aa14.25□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 PrkcbP68404 671 aa14.25□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Tmprss11aQ3UQ41 389 aa14.25□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Tgfbrap1Q3UR70 860 aa14.25□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Clul1Q3ZRW6 464 aa14.25□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Ece1Q4PZA2 769 aa14.25□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Sco1Q5SUC9 284 aa14.25□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 OgdhQ60597 1023 aaKnown RBP14.25□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 LbpQ61805 481 aa14.25□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 PnocQ64387 187 aa14.25□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Adcy2Q80TL1 1090 aa14.25□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Bpifb9aQ80XI7 591 aa14.25□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Slc45a1Q8BIV7 751 aa14.25□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Osbpl2Q8BX94 484 aa14.25□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Adgra1Q8C4G9 578 aa14.25□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Syne4Q8CII8 388 aa14.25□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 AdigQ8R400 80 aa14.25□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Igf2bp3Q9CPN8 579 aaKnown RBP14.25□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Fam187aQ9D3R5 417 aa14.25□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Eif4e3Q9DBB5 207 aa14.25□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 SyncQ9EPM5 470 aa14.25□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Rtn3Q9ES97 964 aa14.25□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Pdzd4Q9QY39 772 aa14.25□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Gap43P06837 227 aa14.24□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Epha3P29319 983 aa14.24□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 DmpkP54265 631 aa14.24□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Rad54lP70270 747 aa14.24□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Odr4Q4PJX1 447 aa14.24□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Krt42Q6IFX2 452 aa14.24□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Lsm8Q6ZWM4 96 aaKnown RBP14.24□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Trpv1Q704Y3 839 aa14.24□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 LnpkQ7TQ95 425 aa14.24□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Slc20a2Q80UP8 656 aa14.24□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Impg2Q80XH2 1243 aa14.24□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Mapk15Q80Y86 549 aa14.24□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Ccser1Q8C0C4 895 aa14.24□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Leg1Q8C6C9 337 aa14.24□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 LgsnQ8CIX8 563 aa14.24□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Unc5bQ8K1S3 945 aa14.24□□□□□ -0.13
Pdlim5-208ENSMUST00000196220 Hdhd5Q91WM2 419 aa14.24□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 16.6 ms