RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Fmnl3Q6ZPF4 1028 aa19.64■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Agap1Q8BXK8 857 aaKnown RBP19.64■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Olfr1499Q8VG65 314 aa19.64■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Fem1bQ9Z2G0 627 aa19.64■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Zscan4-ps3A0A1B0GRH6 506 aa19.64■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Zscan4-ps2A0A1C7CYU6 506 aa19.64■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Tulp2P46686 562 aa19.64■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Syne3Q4FZC9 975 aa19.64■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Ccdc125Q5U465 500 aa19.64■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Nlrp14Q6B966 993 aa19.64■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Zswim5Q80TC6 1188 aa19.64■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Trpm8Q8R4D5 1104 aa19.64■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Cd248Q91V98 765 aa19.64■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Mrpl2Q9D773 306 aaKnown RBP19.64■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Rnf6Q9DBU5 667 aa19.64■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Klra7Q60654 280 aa19.63■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Tcf4Q60722 670 aa19.63■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Gm2163Q6PCY5 473 aa19.63■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Bri3bpQ8BXV2 253 aa19.63■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Pih1h3bQ8C6P5 218 aa19.63■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Champ1Q8K327 802 aaKnown RBP19.63■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Sec14l2Q99J08 403 aa19.63■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Rnf135Q9CWS1 417 aa19.63■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Sucla2Q9Z2I9 463 aa19.63■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Spata31d1dE9Q5W2 1247 aa19.63■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Cd70O55237 195 aa19.63■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Fgfr2P21803 821 aa19.63■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Rhox5P52651 210 aa19.63■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Psmc5P62196 406 aa19.63■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Mfsd14aP70187 490 aa19.63■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 EtnpplQ8BWU8 499 aa19.63■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Pcdhb3Q91XZ7 784 aa19.63■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Tacc3Q9JJ11 631 aa19.63■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Flot1O08917 428 aa19.62■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Ddr1Q03146 911 aa19.62■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Zfp953Q3UPV7 304 aa19.62■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Oog4Q4G0C7 502 aa19.62■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 B4galnt4Q766D5 1034 aa19.62■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Nsun6Q7TS68 476 aa19.62■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Rsad2Q8CBB9 362 aa19.62■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Ints9Q8K114 658 aaKnown RBP19.62■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Slc26a7Q8R2Z3 656 aa19.62■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Dnajc18Q9CZJ9 357 aa19.62■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Phf2Q9WTU0 1096 aa19.62■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Eddm13E9Q7F5 164 aa19.62■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Gm10436L7N1Y3 520 aa19.62■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 PklrP53657 574 aa19.62■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Lrrn4P59383 733 aa19.62■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Abi2P62484 446 aa19.62■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Ptprn2P80560 1001 aa19.62■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Psen2Q61144 448 aa19.62■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Slc9c1Q6UJY2 1175 aa19.62■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Ipo5Q8BKC5 1097 aaKnown RBP19.62■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 ItpkaQ8R071 459 aa19.62■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Prss23Q9D6X6 382 aa19.62■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Mpp2Q9WV34 552 aa19.62■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Cep85lA0A1W2P884 806 aa19.61■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 AunipE9Q6Z5 340 aa19.61■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Wnt10bP48614 389 aa19.61■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 RalaP63321 206 aa19.61■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Tmem120bQ3TA38 339 aa19.61■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Cyfip1Q7TMB8 1253 aa19.61■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Nipa1Q8BHK1 323 aa19.61■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Iffo1Q8BXL9 562 aa19.61■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Vps36Q91XD6 386 aa19.61■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Gps2Q921N8 327 aa19.61■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Q9D2Q3 444 aa19.61■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Smok2bQ9QYZ3 484 aa19.61■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Smok2aQ9QYZ6 504 aa19.61■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Znf394Q9Z1D9 521 aa19.61■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 6030498E09RikB1AX85 169 aa19.61■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 P01734 135 aa19.61■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Zdhhc18Q5Y5T2 380 aa19.61■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Tbc1d22bQ80VE5 505 aa19.61■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Q80WR5 230 aa19.61■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Creb3l2Q8BH52 521 aa19.61■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Snapc2Q91XA5 359 aa19.61■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Gpatch1Q9DBM1 930 aa19.61■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Ly6iQ9WU67 134 aa19.61■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Gm4846B2RWH8 538 aa19.6■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Axin2O88566 840 aa19.6■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Fmr1P35922 614 aaKnown RBP19.6■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Agbl1Q09M05 972 aa19.6■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Fam193bQ3U2K0 892 aa19.6■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 RbakQ8BQC8 711 aa19.6■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Ftsj3Q9DBE9 838 aaKnown RBP19.6■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Cntn6Q9JMB8 1028 aa19.6■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Myh9Q8VDD5 1960 aaKnown RBP19.6■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 TroapB7ZNG4 668 aa19.6■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 UrosP51163 265 aa19.6■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Frg1P97376 258 aaKnown RBP19.6■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Trim21Q62191 470 aa19.6■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Q6DFW0 481 aa19.6■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Btbd9Q8C726 612 aa19.6■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Rhobtb2Q91V93 728 aa19.6■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Rap1gds1E9Q912 607 aa19.59■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Lmnb1P14733 588 aaKnown RBP19.59■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Oprl1P35377 367 aa19.59■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Tff2Q03404 129 aa19.59■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 SpertQ32MG2 446 aa19.59■□□□□ 0.73
Retrieved 100 of 22,080 RNA–protein pairs in 20.8 ms