RNA–Protein interactions for RNA: YDR213W

UPC2, Transcript of Sterol regulatory element binding protein, yeast

Gene UPC2, Length 2,742 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UPC2	YDR213W	MTC2	P34246	357 aa		3.91	□□□□□ -1.78
UPC2	YDR213W	TSA1	P34760	196 aa	Known RBP	3.91	□□□□□ -1.78
UPC2	YDR213W	CHK1	P38147	527 aa		3.91	□□□□□ -1.78
UPC2	YDR213W	YBR096W	P38256	230 aa		3.91	□□□□□ -1.78
UPC2	YDR213W	PCL5	P38794	229 aa		3.91	□□□□□ -1.78
UPC2	YDR213W	GPP2	P40106	250 aa	Known RBP	3.91	□□□□□ -1.78
UPC2	YDR213W	SPO74	P45819	413 aa		3.91	□□□□□ -1.78
UPC2	YDR213W	AAH1	P53909	347 aa		3.91	□□□□□ -1.78
UPC2	YDR213W	EKI1	Q03764	534 aa		3.91	□□□□□ -1.78
UPC2	YDR213W	RPL9A	P05738	191 aa	Known RBP	3.91	□□□□□ -1.78
UPC2	YDR213W	MIR1	P23641	311 aa	Known RBP	3.91	□□□□□ -1.78
UPC2	YDR213W	PUT3	P25502	979 aa	Predicted RBP	3.91	□□□□□ -1.78
UPC2	YDR213W	PHO11	P35842	467 aa		3.91	□□□□□ -1.78
UPC2	YDR213W	OMA1	P36163	345 aa		3.91	□□□□□ -1.78
UPC2	YDR213W	BNA4	P38169	460 aa		3.91	□□□□□ -1.78
UPC2	YDR213W	PHO12	P38693	467 aa		3.91	□□□□□ -1.78
UPC2	YDR213W	PTC7	P38797	343 aa		3.91	□□□□□ -1.78
UPC2	YDR213W	YHR210C	P38893	341 aa		3.91	□□□□□ -1.78
UPC2	YDR213W	LYS12	P40495	371 aa	Known RBP	3.91	□□□□□ -1.78
UPC2	YDR213W	NEO1	P40527	1151 aa		3.91	□□□□□ -1.78
UPC2	YDR213W	PET130	P47065	347 aa		3.91	□□□□□ -1.78
UPC2	YDR213W	ADO1	P47143	340 aa	Known RBP	3.91	□□□□□ -1.78
UPC2	YDR213W	RPL9B	P51401	191 aa	Known RBP	3.91	□□□□□ -1.78
UPC2	YDR213W	PDR16	P53860	351 aa	Known RBP	3.91	□□□□□ -1.78
UPC2	YDR213W	YNL134C	P53912	376 aa	Known RBP	3.91	□□□□□ -1.78
UPC2	YDR213W	YPL067C	Q02754	198 aa		3.91	□□□□□ -1.78
UPC2	YDR213W	YML053C	Q04978	212 aa		3.91	□□□□□ -1.78
UPC2	YDR213W	PRS5	Q12265	496 aa	Known RBP	3.91	□□□□□ -1.78
UPC2	YDR213W	SET6	Q12529	373 aa		3.91	□□□□□ -1.78
UPC2	YDR213W	CCH1	P50077	2039 aa		3.91	□□□□□ -1.78
UPC2	YDR213W	SEC59	P20048	519 aa		3.9	□□□□□ -1.78
UPC2	YDR213W	ELO2	P25358	347 aa		3.9	□□□□□ -1.78
UPC2	YDR213W	PRO1	P32264	428 aa		3.9	□□□□□ -1.78
UPC2	YDR213W	PAU2	P32612	120 aa		3.9	□□□□□ -1.78
UPC2	YDR213W	YEF1	P32622	495 aa		3.9	□□□□□ -1.78
UPC2	YDR213W	ECM34	P38728	170 aa		3.9	□□□□□ -1.78
UPC2	YDR213W	MXR1	P40029	184 aa		3.9	□□□□□ -1.78
UPC2	YDR213W	GAT2	P40209	560 aa		3.9	□□□□□ -1.78
UPC2	YDR213W	YJR149W	P47177	404 aa		3.9	□□□□□ -1.78
UPC2	YDR213W	PNC1	P53184	216 aa	Known RBP	3.9	□□□□□ -1.78
UPC2	YDR213W	TIM21	P53220	239 aa		3.9	□□□□□ -1.78
UPC2	YDR213W	PRM1	P53835	661 aa		3.9	□□□□□ -1.78
UPC2	YDR213W	CYT2	Q00873	224 aa		3.9	□□□□□ -1.78
UPC2	YDR213W	CWC27	Q02770	301 aa		3.9	□□□□□ -1.78
UPC2	YDR213W	YOR015W	Q12169	119 aa		3.9	□□□□□ -1.78
UPC2	YDR213W	PEX11	Q12462	236 aa		3.9	□□□□□ -1.78
UPC2	YDR213W	CDC7	P06243	507 aa		3.9	□□□□□ -1.79
UPC2	YDR213W	RPS25B	P0C0T4	108 aa	Known RBP	3.9	□□□□□ -1.79
UPC2	YDR213W	PTP1	P25044	335 aa		3.9	□□□□□ -1.79
UPC2	YDR213W	MAL32	P38158	584 aa		3.9	□□□□□ -1.79
UPC2	YDR213W	FAT1	P38225	669 aa		3.9	□□□□□ -1.79
UPC2	YDR213W	GLC8	P41818	229 aa		3.9	□□□□□ -1.79
UPC2	YDR213W	IDP2	P41939	412 aa		3.9	□□□□□ -1.79
UPC2	YDR213W	OTU1	P43558	301 aa		3.9	□□□□□ -1.79
UPC2	YDR213W	CIN2	P46670	268 aa		3.9	□□□□□ -1.79
UPC2	YDR213W	MAL12	P53341	584 aa		3.9	□□□□□ -1.79
UPC2	YDR213W	PIR3	Q03180	325 aa		3.9	□□□□□ -1.79
UPC2	YDR213W	CUE4	Q04201	117 aa	Predicted RBP	3.9	□□□□□ -1.79
UPC2	YDR213W	MED7	Q08278	222 aa		3.9	□□□□□ -1.79
UPC2	YDR213W	YOR387C	Q08910	206 aa		3.9	□□□□□ -1.79
UPC2	YDR213W	MMT2	Q08970	484 aa		3.9	□□□□□ -1.79
UPC2	YDR213W	SRO7	Q12038	1033 aa		3.9	□□□□□ -1.79
UPC2	YDR213W	RTK1	Q12100	620 aa	Predicted RBP	3.9	□□□□□ -1.79
UPC2	YDR213W	PDH1	Q12428	516 aa	Known RBP	3.9	□□□□□ -1.79
UPC2	YDR213W	RPS25A	Q3E792	108 aa	Predicted RBP	3.9	□□□□□ -1.79
UPC2	YDR213W	YNR034W-A	Q3E841	98 aa		3.9	□□□□□ -1.79
UPC2	YDR213W	YKL033W-A	Q86ZR7	236 aa		3.9	□□□□□ -1.79
UPC2	YDR213W	YPR096C	O13587	100 aa		3.89	□□□□□ -1.79
UPC2	YDR213W	MET3	P08536	511 aa		3.89	□□□□□ -1.79
UPC2	YDR213W	ARF2	P19146	181 aa	Known RBP	3.89	□□□□□ -1.79
UPC2	YDR213W	ADH7	P25377	361 aa		3.89	□□□□□ -1.79
UPC2	YDR213W	SUI1	P32911	108 aa	Known RBP	3.89	□□□□□ -1.79
UPC2	YDR213W	OAR1	P35731	278 aa		3.89	□□□□□ -1.79
UPC2	YDR213W	RPL14A	P36105	138 aa	Known RBP	3.89	□□□□□ -1.79
UPC2	YDR213W	RPL14B	P38754	138 aa	Known RBP	3.89	□□□□□ -1.79
UPC2	YDR213W	YIL108W	P40483	696 aa	Known RBP	3.89	□□□□□ -1.79
UPC2	YDR213W	BAT2	P47176	376 aa	Known RBP	3.89	□□□□□ -1.79
UPC2	YDR213W	BNS1	P50084	137 aa		3.89	□□□□□ -1.79
UPC2	YDR213W	EMC4	P53073	190 aa		3.89	□□□□□ -1.79
UPC2	YDR213W	CDH1	P53197	566 aa		3.89	□□□□□ -1.79
UPC2	YDR213W	YGR012W	P53206	393 aa		3.89	□□□□□ -1.79
UPC2	YDR213W	MRP51	Q02950	344 aa		3.89	□□□□□ -1.79
UPC2	YDR213W	NRG1	Q03125	231 aa		3.89	□□□□□ -1.79
UPC2	YDR213W	GMC1	Q04399	608 aa		3.89	□□□□□ -1.79
UPC2	YDR213W	FIT1	Q04433	528 aa		3.89	□□□□□ -1.79
UPC2	YDR213W	NAT5	Q08689	176 aa		3.89	□□□□□ -1.79
UPC2	YDR213W	RPS21A	P0C0V8	87 aa	Known RBP	3.89	□□□□□ -1.79
UPC2	YDR213W	RPL11A	P0C0W9	174 aa	Known RBP	3.89	□□□□□ -1.79
UPC2	YDR213W	YOL162W	P0CF19	215 aa		3.89	□□□□□ -1.79
UPC2	YDR213W	SCL1	P21243	252 aa	Known RBP	3.89	□□□□□ -1.79
UPC2	YDR213W	CLB6	P32943	380 aa		3.89	□□□□□ -1.79
UPC2	YDR213W	DOA1	P36037	715 aa		3.89	□□□□□ -1.79
UPC2	YDR213W	POP8	P38208	133 aa		3.89	□□□□□ -1.79
UPC2	YDR213W	ALG14	P38242	237 aa		3.89	□□□□□ -1.79
UPC2	YDR213W	PHO90	P39535	881 aa		3.89	□□□□□ -1.79
UPC2	YDR213W	UIP3	P39547	235 aa		3.89	□□□□□ -1.79
UPC2	YDR213W	JHD1	P40034	492 aa		3.89	□□□□□ -1.79
UPC2	YDR213W	YNL195C	P40168	261 aa		3.89	□□□□□ -1.79
UPC2	YDR213W	SIP4	P46954	829 aa		3.89	□□□□□ -1.79
UPC2	YDR213W	YGR149W	P48236	432 aa		3.89	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms