RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 HNRNPH2P55795 449 aaKnown RBP18.37■□□□□ 0.53
PHGDH-211ENST00000641213 CDR2Q01850 454 aa18.37■□□□□ 0.53
PHGDH-211ENST00000641213 C15orf39Q6ZRI6 1047 aa18.37■□□□□ 0.53
PHGDH-211ENST00000641213 RIOX2Q8IUF8 465 aa18.37■□□□□ 0.53
PHGDH-211ENST00000641213 ASAP3Q8TDY4 903 aa18.37■□□□□ 0.53
PHGDH-211ENST00000641213 DHX38Q92620 1227 aaKnown RBP18.37■□□□□ 0.53
PHGDH-211ENST00000641213 FAM84AQ96KN4 292 aa18.37■□□□□ 0.53
PHGDH-211ENST00000641213 RUFY1Q96T51 708 aa18.37■□□□□ 0.53
PHGDH-211ENST00000641213 PORCNQ9H237 461 aa18.37■□□□□ 0.53
PHGDH-211ENST00000641213 DHX33Q9H6R0 707 aaKnown RBP18.37■□□□□ 0.53
PHGDH-211ENST00000641213 CHORDC1Q9UHD1 332 aaPredicted RBP18.37■□□□□ 0.53
PHGDH-211ENST00000641213 NR2E1Q9Y466 385 aa18.37■□□□□ 0.53
PHGDH-211ENST00000641213 IGKV6D-21A0A0A0MT36 114 aa18.36■□□□□ 0.53
PHGDH-211ENST00000641213 ATMINO43313 823 aaPredicted RBP18.36■□□□□ 0.53
PHGDH-211ENST00000641213 GLRA2P23416 452 aa18.36■□□□□ 0.53
PHGDH-211ENST00000641213 PDE6CP51160 858 aa18.36■□□□□ 0.53
PHGDH-211ENST00000641213 HLTFQ14527 1009 aaKnown RBP eCLIP18.36■□□□□ 0.53
PHGDH-211ENST00000641213 CFAP58Q5T655 872 aa18.36■□□□□ 0.53
PHGDH-211ENST00000641213 MAATS1Q7Z4T9 603 aa18.36■□□□□ 0.53
PHGDH-211ENST00000641213 DDX42Q86XP3 938 aaKnown RBP eCLIP18.36■□□□□ 0.533e-6■■■□□ 16.1
PHGDH-211ENST00000641213 CCDC26Q8TAB7 109 aa18.36■□□□□ 0.53
PHGDH-211ENST00000641213 FAM76AQ8TAV0 307 aa18.36■□□□□ 0.53
PHGDH-211ENST00000641213 PIK3R5Q8WYR1 880 aa18.36■□□□□ 0.53
PHGDH-211ENST00000641213 DDX1Q92499 740 aaKnown RBP18.36■□□□□ 0.53
PHGDH-211ENST00000641213 KCNN1Q92952 543 aa18.36■□□□□ 0.53
PHGDH-211ENST00000641213 CEP89Q96ST8 783 aa18.36■□□□□ 0.53
PHGDH-211ENST00000641213 PI4K2AQ9BTU6 479 aa18.36■□□□□ 0.53
PHGDH-211ENST00000641213 KIAA1586Q9HCI6 787 aa18.36■□□□□ 0.53
PHGDH-211ENST00000641213 FBXO40Q9UH90 709 aa18.36■□□□□ 0.53
PHGDH-211ENST00000641213 STYXL1Q9Y6J8 313 aa18.36■□□□□ 0.53
PHGDH-211ENST00000641213 MIF4GDA9UHW6 222 aaKnown RBP18.35■□□□□ 0.53
PHGDH-211ENST00000641213 UBA1P22314 1058 aaKnown RBP18.35■□□□□ 0.53
PHGDH-211ENST00000641213 CLDN10P78369 228 aa18.35■□□□□ 0.53
PHGDH-211ENST00000641213 POU5F1Q01860 360 aaKnown RBP18.35■□□□□ 0.53
PHGDH-211ENST00000641213 GCNT1Q02742 428 aa18.35■□□□□ 0.53
PHGDH-211ENST00000641213 STRN3Q13033 797 aa18.35■□□□□ 0.53
PHGDH-211ENST00000641213 PPFIA1Q13136 1202 aa18.35■□□□□ 0.53
PHGDH-211ENST00000641213 ZNF211Q13398 564 aaPredicted RBP18.35■□□□□ 0.53
PHGDH-211ENST00000641213 PSPC1Q8WXF1 523 aaKnown RBP18.35■□□□□ 0.53
PHGDH-211ENST00000641213 NIFKQ9BYG3 293 aaKnown RBP18.35■□□□□ 0.53
PHGDH-211ENST00000641213 GSTTP1A0A1W2PQM5 241 aa18.35■□□□□ 0.53
PHGDH-211ENST00000641213 TMEM110-MUSTN1A8MSY1 372 aa18.35■□□□□ 0.53
PHGDH-211ENST00000641213 TTI1O43156 1089 aa18.35■□□□□ 0.53
PHGDH-211ENST00000641213 ZC3H11AO75152 810 aaKnown RBP eCLIP18.35■□□□□ 0.53
PHGDH-211ENST00000641213 CYP1A2P05177 515 aa18.35■□□□□ 0.53
PHGDH-211ENST00000641213 ARL2P36404 184 aa18.35■□□□□ 0.53
PHGDH-211ENST00000641213 HSPA9P38646 679 aaKnown RBP18.35■□□□□ 0.53
PHGDH-211ENST00000641213 NAMPTP43490 491 aa18.35■□□□□ 0.53
PHGDH-211ENST00000641213 PSMD6Q15008 389 aa18.35■□□□□ 0.53
PHGDH-211ENST00000641213 ZSCAN26Q16670 478 aa18.35■□□□□ 0.53
PHGDH-211ENST00000641213 NAA35Q5VZE5 725 aa18.35■□□□□ 0.53
PHGDH-211ENST00000641213 ARL8AQ96BM9 186 aa18.35■□□□□ 0.53
PHGDH-211ENST00000641213 RPS6KC1Q96S38 1066 aa18.35■□□□□ 0.53
PHGDH-211ENST00000641213 NAP1L3Q99457 506 aaPredicted RBP18.35■□□□□ 0.53
PHGDH-211ENST00000641213 CELF4Q9BZC1 486 aaKnown RBP18.35■□□□□ 0.53
PHGDH-211ENST00000641213 HAPLN2Q9GZV7 340 aa18.35■□□□□ 0.53
PHGDH-211ENST00000641213 SOWAHBA6NEL2 793 aa18.34■□□□□ 0.53
PHGDH-211ENST00000641213 GRIN3BO60391 1043 aa18.34■□□□□ 0.53
PHGDH-211ENST00000641213 WNT7BP56706 349 aa18.34■□□□□ 0.53
PHGDH-211ENST00000641213 NLRP11P59045 1033 aaKnown RBP18.34■□□□□ 0.53
PHGDH-211ENST00000641213 PTENP60484 403 aa18.34■□□□□ 0.53
PHGDH-211ENST00000641213 MESDQ14696 234 aa18.34■□□□□ 0.53
PHGDH-211ENST00000641213 TTMPQ5BVD1 217 aa18.34■□□□□ 0.53
PHGDH-211ENST00000641213 LMBRD2Q68DH5 695 aaPredicted RBP18.34■□□□□ 0.53
PHGDH-211ENST00000641213 ENOSF1Q7L5Y1 443 aa18.34■□□□□ 0.53
PHGDH-211ENST00000641213 UBL4BQ8N7F7 174 aa18.34■□□□□ 0.53
PHGDH-211ENST00000641213 SEC14L1Q92503 715 aa18.34■□□□□ 0.53
PHGDH-211ENST00000641213 KRT35Q92764 455 aa18.34■□□□□ 0.53
PHGDH-211ENST00000641213 PCYT2Q99447 389 aa18.34■□□□□ 0.53
PHGDH-211ENST00000641213 ZSWIM1Q9BR11 485 aa18.34■□□□□ 0.53
PHGDH-211ENST00000641213 NEUROG2Q9H2A3 272 aa18.34■□□□□ 0.53
PHGDH-211ENST00000641213 CALCOCO1Q9P1Z2 691 aa18.34■□□□□ 0.53
PHGDH-211ENST00000641213 AGO2Q9UKV8 859 aaKnown RBP18.34■□□□□ 0.53
PHGDH-211ENST00000641213 LRRIQ4A6NIV6 560 aa18.34■□□□□ 0.53
PHGDH-211ENST00000641213 FARP2O94887 1054 aaPredicted RBP18.34■□□□□ 0.53
PHGDH-211ENST00000641213 PIGRP01833 764 aa18.34■□□□□ 0.53
PHGDH-211ENST00000641213 KRT5P13647 590 aa18.34■□□□□ 0.53
PHGDH-211ENST00000641213 COMTP21964 271 aa18.34■□□□□ 0.53
PHGDH-211ENST00000641213 EDNRBP24530 442 aa18.34■□□□□ 0.53
PHGDH-211ENST00000641213 MARCKSL1P49006 195 aa18.34■□□□□ 0.53
PHGDH-211ENST00000641213 ACOT2P49753 483 aa18.34■□□□□ 0.53
PHGDH-211ENST00000641213 CLUL1Q15846 466 aa18.34■□□□□ 0.53
PHGDH-211ENST00000641213 KCTD19Q17RG1 926 aaPredicted RBP18.34■□□□□ 0.53
PHGDH-211ENST00000641213 CRELD2Q6UXH1 353 aaPredicted RBP18.34■□□□□ 0.53
PHGDH-211ENST00000641213 LEKR1Q6ZMV7 388 aa18.34■□□□□ 0.53
PHGDH-211ENST00000641213 DEPTORQ8TB45 409 aa18.34■□□□□ 0.53
PHGDH-211ENST00000641213 SLC7A3Q8WY07 619 aa18.34■□□□□ 0.53
PHGDH-211ENST00000641213 NUP85Q9BW27 656 aa18.34■□□□□ 0.53
PHGDH-211ENST00000641213 SPATC1LQ9H0A9 340 aa18.34■□□□□ 0.53
PHGDH-211ENST00000641213 ERVK-5Q9HDB9 667 aa18.34■□□□□ 0.53
PHGDH-211ENST00000641213 C1orf112Q9NSG2 853 aa18.34■□□□□ 0.53
PHGDH-211ENST00000641213 GTF3C4Q9UKN8 822 aa18.34■□□□□ 0.53
PHGDH-211ENST00000641213 TRPC6Q9Y210 931 aa18.34■□□□□ 0.53
PHGDH-211ENST00000641213 CSADQ9Y600 493 aa18.34■□□□□ 0.53
PHGDH-211ENST00000641213 MCM3APO60318 1980 aa18.33■□□□□ 0.52
PHGDH-211ENST00000641213 K7ERI5 159 aa18.33■□□□□ 0.52
PHGDH-211ENST00000641213 KIAA0391O15091 583 aaKnown RBP18.33■□□□□ 0.52
PHGDH-211ENST00000641213 DAPK3O43293 454 aa18.33■□□□□ 0.52
PHGDH-211ENST00000641213 KRT14P02533 472 aa18.33■□□□□ 0.52
PHGDH-211ENST00000641213 SCP2P22307 547 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms