RNA–Protein interactions for RNA: ENST00000640414.1

MECP2-226, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-226ENST00000640414 PHF20Q9BVI0 1012 aa12.85□□□□□ -0.35
MECP2-226ENST00000640414 CHST7Q9NS84 486 aa12.85□□□□□ -0.35
MECP2-226ENST00000640414 NRBP2Q9NSY0 501 aa12.85□□□□□ -0.35
MECP2-226ENST00000640414 TBC1D22BQ9NU19 505 aa12.85□□□□□ -0.35
MECP2-226ENST00000640414 FRYQ5TBA9 3013 aa12.84□□□□□ -0.35
MECP2-226ENST00000640414 TM4SF5O14894 197 aa12.84□□□□□ -0.35
MECP2-226ENST00000640414 RPL17P18621 184 aaKnown RBP12.84□□□□□ -0.35
MECP2-226ENST00000640414 OR1G1P47890 313 aa12.84□□□□□ -0.35
MECP2-226ENST00000640414 NAPAP54920 295 aa12.84□□□□□ -0.35
MECP2-226ENST00000640414 NUCB2P80303 420 aa12.84□□□□□ -0.35
MECP2-226ENST00000640414 PRKCEQ02156 737 aa12.84□□□□□ -0.35
MECP2-226ENST00000640414 SIM2Q14190 667 aaPredicted RBP12.84□□□□□ -0.35
MECP2-226ENST00000640414 FOXD4L5Q5VV16 416 aaPredicted RBP12.84□□□□□ -0.35
MECP2-226ENST00000640414 ZNF852Q6ZMS4 543 aa12.84□□□□□ -0.35
MECP2-226ENST00000640414 MAMSTRQ6ZN01 415 aa12.84□□□□□ -0.35
MECP2-226ENST00000640414 CATSPER4Q7RTX7 472 aa12.84□□□□□ -0.35
MECP2-226ENST00000640414 MRPL10Q7Z7H8 261 aaKnown RBP12.84□□□□□ -0.35
MECP2-226ENST00000640414 ZNF687Q8N1G0 1237 aa12.84□□□□□ -0.35
MECP2-226ENST00000640414 FOXD4L4Q8WXT5 416 aaPredicted RBP12.84□□□□□ -0.35
MECP2-226ENST00000640414 CHRDQ9H2X0 955 aa12.84□□□□□ -0.35
MECP2-226ENST00000640414 HEBP1Q9NRV9 189 aa12.84□□□□□ -0.35
MECP2-226ENST00000640414 VPS54Q9P1Q0 977 aa12.84□□□□□ -0.35
MECP2-226ENST00000640414 TCEAL9Q9UHQ7 104 aa12.84□□□□□ -0.35
MECP2-226ENST00000640414 KCNJ14Q9UNX9 436 aa12.84□□□□□ -0.35
MECP2-226ENST00000640414 MRPS17Q9Y2R5 130 aaKnown RBP12.84□□□□□ -0.35
MECP2-226ENST00000640414 SAMM50Q9Y512 469 aa12.84□□□□□ -0.35
MECP2-226ENST00000640414 CNTNAP2Q9UHC6 1331 aa12.84□□□□□ -0.35
MECP2-226ENST00000640414 RALGAPA1Q6GYQ0 2036 aa12.83□□□□□ -0.36
MECP2-226ENST00000640414 VPS37CA5D8V6 355 aaPredicted RBP12.83□□□□□ -0.36
MECP2-226ENST00000640414 H3BQV1 296 aa12.83□□□□□ -0.36
MECP2-226ENST00000640414 FOXD2O60548 495 aaPredicted RBP12.83□□□□□ -0.36
MECP2-226ENST00000640414 PDIA4P13667 645 aaKnown RBP12.83□□□□□ -0.36
MECP2-226ENST00000640414 CLK2P49760 499 aaKnown RBP12.83□□□□□ -0.36
MECP2-226ENST00000640414 ADCY7P51828 1080 aa12.83□□□□□ -0.36
MECP2-226ENST00000640414 CDC42EP1Q00587 391 aa12.83□□□□□ -0.36
MECP2-226ENST00000640414 AP3B2Q13367 1082 aa12.83□□□□□ -0.36
MECP2-226ENST00000640414 TARBP2Q15633 366 aaKnown RBP12.83□□□□□ -0.36
MECP2-226ENST00000640414 UGCGQ16739 394 aa12.83□□□□□ -0.36
MECP2-226ENST00000640414 UNQ6494/PRO21346Q6UXR6 183 aa12.83□□□□□ -0.36
MECP2-226ENST00000640414 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.83□□□□□ -0.36
MECP2-226ENST00000640414 ITFG1Q8TB96 612 aa12.83□□□□□ -0.36
MECP2-226ENST00000640414 CRYGNQ8WXF5 182 aa12.83□□□□□ -0.36
MECP2-226ENST00000640414 MBOAT7Q96N66 472 aa12.83□□□□□ -0.36
MECP2-226ENST00000640414 INO80BQ9C086 356 aaPredicted RBP12.83□□□□□ -0.36
MECP2-226ENST00000640414 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.83□□□□□ -0.36
MECP2-226ENST00000640414 AGPAT5Q9NUQ2 364 aa12.83□□□□□ -0.36
MECP2-226ENST00000640414 BARHL2Q9NY43 387 aa12.83□□□□□ -0.36
MECP2-226ENST00000640414 FNIP2Q9P278 1114 aa12.83□□□□□ -0.36
MECP2-226ENST00000640414 ZFYVE26Q68DK2 2539 aa12.83□□□□□ -0.36
MECP2-226ENST00000640414 CNOT1A5YKK6 2376 aaKnown RBP12.83□□□□□ -0.36
MECP2-226ENST00000640414 HRO43593 1189 aa12.82□□□□□ -0.36
MECP2-226ENST00000640414 ZSCAN22P10073 491 aaPredicted RBP12.82□□□□□ -0.36
MECP2-226ENST00000640414 LIMK1P53667 647 aa12.82□□□□□ -0.36
MECP2-226ENST00000640414 DSC1Q08554 894 aa12.82□□□□□ -0.36
MECP2-226ENST00000640414 SRSF5Q13243 272 aaKnown RBP12.82□□□□□ -0.36
MECP2-226ENST00000640414 PPP2R5DQ14738 602 aa12.82□□□□□ -0.36
MECP2-226ENST00000640414 UBXN11Q5T124 520 aa12.82□□□□□ -0.36
MECP2-226ENST00000640414 PPP1R18Q6NYC8 613 aa12.82□□□□□ -0.36
MECP2-226ENST00000640414 ZNF410Q86VK4 478 aa12.82□□□□□ -0.36
MECP2-226ENST00000640414 RHPN2Q8IUC4 686 aa12.82□□□□□ -0.36
MECP2-226ENST00000640414 KSR1Q8IVT5 923 aa12.82□□□□□ -0.36
MECP2-226ENST00000640414 TEX2Q8IWB9 1127 aa12.82□□□□□ -0.36
MECP2-226ENST00000640414 NPAS3Q8IXF0 933 aa12.82□□□□□ -0.36
MECP2-226ENST00000640414 GPR62Q9BZJ7 368 aa12.82□□□□□ -0.36
MECP2-226ENST00000640414 PLA2G2FQ9BZM2 168 aa12.82□□□□□ -0.36
MECP2-226ENST00000640414 SH3GLB2Q9NR46 395 aa12.82□□□□□ -0.36
MECP2-226ENST00000640414 FBXW11Q9UKB1 542 aa12.82□□□□□ -0.36
MECP2-226ENST00000640414 NDRG2Q9UN36 371 aaKnown RBP12.82□□□□□ -0.36
MECP2-226ENST00000640414 SPEGQ15772 3267 aa12.82□□□□□ -0.36
MECP2-226ENST00000640414 ASPMQ8IZT6 3477 aa12.81□□□□□ -0.36
MECP2-226ENST00000640414 IGKV6-21A0A0C4DH24 114 aa12.81□□□□□ -0.36
MECP2-226ENST00000640414 SMCO2A6NFE2 343 aa12.81□□□□□ -0.36
MECP2-226ENST00000640414 SOBPA7XYQ1 873 aa12.81□□□□□ -0.36
MECP2-226ENST00000640414 WDR64B1ANS9 1081 aa12.81□□□□□ -0.36
MECP2-226ENST00000640414 ADAMTS3O15072 1205 aa12.81□□□□□ -0.36
MECP2-226ENST00000640414 CYP3A4P08684 503 aa12.81□□□□□ -0.36
MECP2-226ENST00000640414 HNRNPA1P09651 372 aaKnown RBP eCLIP12.81□□□□□ -0.36
MECP2-226ENST00000640414 XBP1P17861 261 aa12.81□□□□□ -0.36
MECP2-226ENST00000640414 CCR3P51677 355 aa12.81□□□□□ -0.36
MECP2-226ENST00000640414 SETQ01105 290 aaPredicted RBP12.81□□□□□ -0.36
MECP2-226ENST00000640414 TRIM29Q14134 588 aa12.81□□□□□ -0.36
MECP2-226ENST00000640414 MTERF2Q49AM1 385 aa12.81□□□□□ -0.36
MECP2-226ENST00000640414 AASDHQ4L235 1098 aaPredicted RBP12.81□□□□□ -0.36
MECP2-226ENST00000640414 FERMT3Q86UX7 667 aa12.81□□□□□ -0.36
MECP2-226ENST00000640414 GPR65Q8IYL9 337 aa12.81□□□□□ -0.36
MECP2-226ENST00000640414 KDF1Q8NAX2 398 aaPredicted RBP12.81□□□□□ -0.36
MECP2-226ENST00000640414 CEP89Q96ST8 783 aa12.81□□□□□ -0.36
MECP2-226ENST00000640414 DISC1Q9NRI5 854 aa12.81□□□□□ -0.36
MECP2-226ENST00000640414 RXFP3Q9NSD7 469 aa12.81□□□□□ -0.36
MECP2-226ENST00000640414 SUCLA2Q9P2R7 463 aaPredicted RBP12.81□□□□□ -0.36
MECP2-226ENST00000640414 POLIQ9UNA4 740 aa12.81□□□□□ -0.36
MECP2-226ENST00000640414 CEP295Q9C0D2 2601 aa12.8□□□□□ -0.36
MECP2-226ENST00000640414 ANKRD11Q6UB99 2663 aaPredicted RBP12.8□□□□□ -0.36
MECP2-226ENST00000640414 TMEM150BA6NC51 233 aa12.8□□□□□ -0.36
MECP2-226ENST00000640414 CHURC1-FNTBB4DL54 471 aa12.8□□□□□ -0.36
MECP2-226ENST00000640414 CCL16O15467 120 aa12.8□□□□□ -0.36
MECP2-226ENST00000640414 ECI2O75521 394 aa12.8□□□□□ -0.36
MECP2-226ENST00000640414 KCNK5O95279 499 aa12.8□□□□□ -0.36
MECP2-226ENST00000640414 C8AP07357 584 aa12.8□□□□□ -0.36
MECP2-226ENST00000640414 NCLP19338 710 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms