RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 COL20A1Q9P218 1284 aa17.75■□□□□ 0.43
HNRNPU-228ENST00000640306 MTUS1Q9ULD2 1270 aa17.75■□□□□ 0.43
HNRNPU-228ENST00000640306 H0YIN7 160 aa17.74■□□□□ 0.43
HNRNPU-228ENST00000640306 CLTAP09496 248 aa17.74■□□□□ 0.43
HNRNPU-228ENST00000640306 CALCOCO2Q13137 446 aa17.74■□□□□ 0.43
HNRNPU-228ENST00000640306 ARMC9Q7Z3E5 817 aa17.74■□□□□ 0.43
HNRNPU-228ENST00000640306 ACCSQ96QU6 501 aa17.74■□□□□ 0.43
HNRNPU-228ENST00000640306 STRA6Q9BX79 667 aa17.74■□□□□ 0.43
HNRNPU-228ENST00000640306 CDC42EP4Q9H3Q1 356 aaKnown RBP17.74■□□□□ 0.43
HNRNPU-228ENST00000640306 CHST7Q9NS84 486 aa17.74■□□□□ 0.43
HNRNPU-228ENST00000640306 COL11A2P13942 1736 aaPredicted RBP17.74■□□□□ 0.43
HNRNPU-228ENST00000640306 PFASO15067 1338 aa17.74■□□□□ 0.43
HNRNPU-228ENST00000640306 NFIBO00712 420 aa17.74■□□□□ 0.43
HNRNPU-228ENST00000640306 KRT5P13647 590 aa17.74■□□□□ 0.43
HNRNPU-228ENST00000640306 BAG6P46379 1132 aa17.74■□□□□ 0.43
HNRNPU-228ENST00000640306 DRG2P55039 364 aaKnown RBP17.74■□□□□ 0.43
HNRNPU-228ENST00000640306 KRT17Q04695 432 aa17.74■□□□□ 0.43
HNRNPU-228ENST00000640306 ADCY2Q08462 1091 aa17.74■□□□□ 0.43
HNRNPU-228ENST00000640306 SGO2Q562F6 1265 aa17.74■□□□□ 0.43
HNRNPU-228ENST00000640306 FAM102BQ5T8I3 360 aa17.74■□□□□ 0.43
HNRNPU-228ENST00000640306 EXOC3L1Q86VI1 746 aa17.74■□□□□ 0.43
HNRNPU-228ENST00000640306 SLC9A9Q8IVB4 645 aa17.74■□□□□ 0.43
HNRNPU-228ENST00000640306 HEMGNQ9BXL5 484 aa17.74■□□□□ 0.43
HNRNPU-228ENST00000640306 UBE4BO95155 1302 aa17.73■□□□□ 0.43
HNRNPU-228ENST00000640306 ECEL1O95672 775 aa17.73■□□□□ 0.43
HNRNPU-228ENST00000640306 GJC1P36383 396 aa17.73■□□□□ 0.43
HNRNPU-228ENST00000640306 SIX1Q15475 284 aaPredicted RBP17.73■□□□□ 0.43
HNRNPU-228ENST00000640306 PRUNE1Q86TP1 453 aa17.73■□□□□ 0.43
HNRNPU-228ENST00000640306 FGFR1OP2Q9NVK5 253 aa17.73■□□□□ 0.43
HNRNPU-228ENST00000640306 PASKQ96RG2 1323 aa17.73■□□□□ 0.43
HNRNPU-228ENST00000640306 SCN9AQ15858 1988 aa17.73■□□□□ 0.43
HNRNPU-228ENST00000640306 AGTP01019 485 aa17.73■□□□□ 0.43
HNRNPU-228ENST00000640306 RARRES1P49788 294 aa17.73■□□□□ 0.43
HNRNPU-228ENST00000640306 SPP2Q13103 211 aa17.73■□□□□ 0.43
HNRNPU-228ENST00000640306 UGCGQ16739 394 aa17.73■□□□□ 0.43
HNRNPU-228ENST00000640306 CD101Q93033 1021 aa17.73■□□□□ 0.43
HNRNPU-228ENST00000640306 MXRA8Q9BRK3 442 aa17.73■□□□□ 0.43
HNRNPU-228ENST00000640306 HERPUD2Q9BSE4 406 aa17.73■□□□□ 0.43
HNRNPU-228ENST00000640306 WNT8AQ9H1J5 351 aa17.73■□□□□ 0.43
HNRNPU-228ENST00000640306 YY1AP1Q9H869 796 aa17.73■□□□□ 0.43
HNRNPU-228ENST00000640306 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.73■□□□□ 0.432e-8■■■□□ 15.5
HNRNPU-228ENST00000640306 MRPL11Q9Y3B7 192 aaKnown RBP17.73■□□□□ 0.43
HNRNPU-228ENST00000640306 CYP11B1P15538 503 aa17.72■□□□□ 0.43
HNRNPU-228ENST00000640306 RWDD2BP57060 319 aa17.72■□□□□ 0.43
HNRNPU-228ENST00000640306 DGKZQ13574 1117 aa17.72■□□□□ 0.43
HNRNPU-228ENST00000640306 CNGA2Q16280 664 aa17.72■□□□□ 0.43
HNRNPU-228ENST00000640306 KYNUQ16719 465 aa17.72■□□□□ 0.43
HNRNPU-228ENST00000640306 LMBRD2Q68DH5 695 aaPredicted RBP17.72■□□□□ 0.43
HNRNPU-228ENST00000640306 TAS1R2Q8TE23 839 aa17.72■□□□□ 0.43
HNRNPU-228ENST00000640306 TAOK3Q9H2K8 898 aa17.72■□□□□ 0.43
HNRNPU-228ENST00000640306 VEZTQ9HBM0 779 aa17.72■□□□□ 0.43
HNRNPU-228ENST00000640306 ANAPC7Q9UJX3 599 aa17.72■□□□□ 0.43
HNRNPU-228ENST00000640306 USP20Q9Y2K6 914 aa17.72■□□□□ 0.43
HNRNPU-228ENST00000640306 TCP11X1B4DZS4 312 aa17.72■□□□□ 0.43
HNRNPU-228ENST00000640306 GH1P01241 217 aa17.72■□□□□ 0.43
HNRNPU-228ENST00000640306 RARGP13631 454 aa17.72■□□□□ 0.43
HNRNPU-228ENST00000640306 LACTB2Q53H82 288 aaPredicted RBP17.72■□□□□ 0.43
HNRNPU-228ENST00000640306 FAM71AQ8IYT1 594 aa17.72■□□□□ 0.43
HNRNPU-228ENST00000640306 ARHGEF2Q92974 986 aaKnown RBP17.72■□□□□ 0.43
HNRNPU-228ENST00000640306 ART4Q93070 314 aa17.72■□□□□ 0.43
HNRNPU-228ENST00000640306 CENPTQ96BT3 561 aa17.72■□□□□ 0.43
HNRNPU-228ENST00000640306 RPS6KC1Q96S38 1066 aa17.72■□□□□ 0.43
HNRNPU-228ENST00000640306 KDM4CQ9H3R0 1056 aa17.72■□□□□ 0.43
HNRNPU-228ENST00000640306 TMEM206Q9H813 350 aa17.72■□□□□ 0.43
HNRNPU-228ENST00000640306 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.72■□□□□ 0.431e-9■■■■■ 34.7
HNRNPU-228ENST00000640306 PPIP5K2O43314 1243 aa17.71■□□□□ 0.43
HNRNPU-228ENST00000640306 SNRNP35Q16560 246 aaKnown RBP17.71■□□□□ 0.43
HNRNPU-228ENST00000640306 CC2D2BQ6DHV5 1058 aa17.71■□□□□ 0.43
HNRNPU-228ENST00000640306 FMNL3Q8IVF7 1028 aa17.71■□□□□ 0.43
HNRNPU-228ENST00000640306 AAASQ9NRG9 546 aa17.71■□□□□ 0.43
HNRNPU-228ENST00000640306 PARP2Q9UGN5 583 aa17.71■□□□□ 0.43
HNRNPU-228ENST00000640306 SERPINA10Q9UK55 444 aa17.71■□□□□ 0.43
HNRNPU-228ENST00000640306 CCPG1Q9ULG6 757 aa17.71■□□□□ 0.43
HNRNPU-228ENST00000640306 AGAP1Q9UPQ3 857 aa17.71■□□□□ 0.43
HNRNPU-228ENST00000640306 TMEM120BA0PK00 339 aa17.71■□□□□ 0.43
HNRNPU-228ENST00000640306 O00370 1275 aa17.71■□□□□ 0.43
HNRNPU-228ENST00000640306 PLS3P13797 630 aa17.71■□□□□ 0.43
HNRNPU-228ENST00000640306 HSPA6P17066 643 aa17.71■□□□□ 0.43
HNRNPU-228ENST00000640306 SPDYCQ5MJ68 293 aa17.71■□□□□ 0.43
HNRNPU-228ENST00000640306 KCND2Q9NZV8 630 aa17.71■□□□□ 0.43
HNRNPU-228ENST00000640306 NRXN2Q9P2S2 1712 aa17.71■□□□□ 0.43
HNRNPU-228ENST00000640306 TMX2Q9Y320 296 aa17.71■□□□□ 0.43
HNRNPU-228ENST00000640306 LRRC37AA6NMS7 1700 aa17.71■□□□□ 0.43
HNRNPU-228ENST00000640306 SORBS3O60504 671 aa17.71■□□□□ 0.43
HNRNPU-228ENST00000640306 P4HBP07237 508 aaKnown RBP17.71■□□□□ 0.43
HNRNPU-228ENST00000640306 RPSAP08865 295 aaKnown RBP17.71■□□□□ 0.43
HNRNPU-228ENST00000640306 ALAS1P13196 640 aa17.71■□□□□ 0.43
HNRNPU-228ENST00000640306 EIF2AK2P19525 551 aaKnown RBP17.71■□□□□ 0.43
HNRNPU-228ENST00000640306 RFX1P22670 979 aa17.71■□□□□ 0.43
HNRNPU-228ENST00000640306 ADSSP30520 456 aa17.71■□□□□ 0.43
HNRNPU-228ENST00000640306 PDE6CP51160 858 aa17.71■□□□□ 0.43
HNRNPU-228ENST00000640306 HADHBP55084 474 aaKnown RBP17.71■□□□□ 0.43
HNRNPU-228ENST00000640306 ELF3P78545 371 aaPredicted RBP17.71■□□□□ 0.43
HNRNPU-228ENST00000640306 XRCC4Q13426 336 aa17.71■□□□□ 0.43
HNRNPU-228ENST00000640306 SLMAPQ14BN4 828 aa17.71■□□□□ 0.43
HNRNPU-228ENST00000640306 TRPM8Q7Z2W7 1104 aa17.71■□□□□ 0.43
HNRNPU-228ENST00000640306 PIGWQ7Z7B1 504 aa17.71■□□□□ 0.43
HNRNPU-228ENST00000640306 CCDC63Q8NA47 563 aa17.71■□□□□ 0.43
HNRNPU-228ENST00000640306 CPA5Q8WXQ8 436 aa17.71■□□□□ 0.43
HNRNPU-228ENST00000640306 CXorf56Q9H5V9 222 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms