RNA–Protein interactions for RNA: ENST00000639667.1

HNRNPU-220, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 2

Gene HNRNPU, Length 3,940 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-220ENST00000639667 SQORQ9Y6N5 450 aa6.31□□□□□ -1.4
HNRNPU-220ENST00000639667 CNTNAP2Q9UHC6 1331 aa6.31□□□□□ -1.4
HNRNPU-220ENST00000639667 SPDYE4A6NLX3 237 aa6.31□□□□□ -1.4
HNRNPU-220ENST00000639667 PDXKO00764 312 aa6.31□□□□□ -1.4
HNRNPU-220ENST00000639667 HOXA2O43364 376 aa6.31□□□□□ -1.4
HNRNPU-220ENST00000639667 TNNC2P02585 160 aa6.31□□□□□ -1.4
HNRNPU-220ENST00000639667 PSMC2P35998 433 aaKnown RBP6.31□□□□□ -1.4
HNRNPU-220ENST00000639667 WDR5P61964 334 aaKnown RBP6.31□□□□□ -1.4
HNRNPU-220ENST00000639667 EP400NLQ6ZTU2 488 aa6.31□□□□□ -1.4
HNRNPU-220ENST00000639667 C11orf57Q6ZUT1 292 aaPredicted RBP6.31□□□□□ -1.4
HNRNPU-220ENST00000639667 ADSSL1Q8N142 457 aa6.31□□□□□ -1.4
HNRNPU-220ENST00000639667 CCDC51Q96ER9 411 aa6.31□□□□□ -1.4
HNRNPU-220ENST00000639667 ZFP42Q96MM3 310 aa6.31□□□□□ -1.4
HNRNPU-220ENST00000639667 PDE11AQ9HCR9 933 aa6.31□□□□□ -1.4
HNRNPU-220ENST00000639667 A0A1B0GUA9 196 aa6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 FRMD3A2A2Y4 597 aa6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 CASTOR2A6NHX0 329 aa6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 NT5C1B-RDH14C9J2C7 533 aa6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 XPOTO43592 962 aaKnown RBP6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 SERPINC1P01008 464 aa6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 EDN1P05305 212 aa6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 HOXA11P31270 313 aaPredicted RBP6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 SARSP49591 514 aaKnown RBP6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 CASP4P49662 377 aa6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 FKBP3Q00688 224 aaKnown RBP6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 PCBP1Q15365 356 aaKnown RBP eCLIP6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 ZBTB41Q5SVQ8 909 aa6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 FAM114A1Q8IWE2 563 aa6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 FIBCD1Q8N539 461 aa6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 ANKRD36BP1Q96IX9 119 aa6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 SEMA6BQ9H3T3 888 aa6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 ARMCX3Q9UH62 379 aaPredicted RBP6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 NFE2L3Q9Y4A8 694 aa6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 EXTL3O43909 919 aa6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 SCP2P22307 547 aa6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 NOMO2Q5JPE7 1267 aa6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 PPP4R3CPQ6ZMV5 832 aa6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 RTN4RL1Q86UN2 441 aaPredicted RBP6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 NPAS4Q8IUM7 802 aa6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 TMEM192Q8IY95 271 aa6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 CCDC150Q8NCX0 1101 aa6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 ZSWIM2Q8NEG5 633 aa6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 BEST2Q8NFU1 509 aa6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 HASPINQ8TF76 798 aa6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 FAM84AQ96KN4 292 aa6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 NFKBIZQ9BYH8 718 aa6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 CCDC113Q9H0I3 377 aa6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 RGS18Q9NS28 235 aa6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 UBE4BO95155 1302 aa6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 A0A0U1RQF3 1178 aa6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 MEIS3P2A8K0S8 358 aa6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 LACTBL1A8MY62 500 aa6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 PPP1R3GB7ZBB8 358 aa6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 THP07101 528 aa6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 TRIM49P0CI25 452 aa6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 TRIM49CP0CI26 452 aa6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 GARTP22102 1010 aa6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 ALDH7A1P49419 539 aaKnown RBP6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 GUCY2FP51841 1108 aa6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 LRMPQ12912 555 aa6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 SNRNP35Q16560 246 aaKnown RBP6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 AMHR2Q16671 573 aa6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 FAM187BQ17R55 369 aa6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 KIAA1841Q6NSI8 718 aa6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 TRAF7Q6Q0C0 670 aa6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 CEP57Q86XR8 500 aa6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 ELOA2Q8IYF1 753 aaPredicted RBP6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 CACTINQ8WUQ7 758 aaKnown RBP6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 FAM161BQ96MY7 647 aa6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 TSPYL2Q9H2G4 693 aaPredicted RBP6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 SLC28A3Q9HAS3 691 aa6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 KIAA1586Q9HCI6 787 aa6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 TMEM161AQ9NX61 479 aa6.3□□□□□ -1.4
HNRNPU-220ENST00000639667 TGFB1I1O43294 461 aa6.29□□□□□ -1.4
HNRNPU-220ENST00000639667 LPXNO60711 386 aa6.29□□□□□ -1.4
HNRNPU-220ENST00000639667 BAIAP3O94812 1187 aa6.29□□□□□ -1.4
HNRNPU-220ENST00000639667 PMS1P54277 932 aaKnown RBP6.29□□□□□ -1.4
HNRNPU-220ENST00000639667 MYL5Q02045 173 aa6.29□□□□□ -1.4
HNRNPU-220ENST00000639667 LRRC63Q05C16 580 aa6.29□□□□□ -1.4
HNRNPU-220ENST00000639667 RBL2Q08999 1139 aa6.29□□□□□ -1.4
HNRNPU-220ENST00000639667 TMEM132DQ14C87 1099 aa6.29□□□□□ -1.4
HNRNPU-220ENST00000639667 KYAT1Q16773 422 aa6.29□□□□□ -1.4
HNRNPU-220ENST00000639667 TCTN1Q2MV58 587 aa6.29□□□□□ -1.4
HNRNPU-220ENST00000639667 FILIP1LQ4L180 1135 aa6.29□□□□□ -1.4
HNRNPU-220ENST00000639667 IFNLR1Q8IU57 520 aaPredicted RBP6.29□□□□□ -1.4
HNRNPU-220ENST00000639667 MICALL1Q8N3F8 863 aa6.29□□□□□ -1.4
HNRNPU-220ENST00000639667 FIZ1Q96SL8 496 aa6.29□□□□□ -1.4
HNRNPU-220ENST00000639667 POP1Q99575 1024 aaKnown RBP6.29□□□□□ -1.4
HNRNPU-220ENST00000639667 IMPG2Q9BZV3 1241 aa6.29□□□□□ -1.4
HNRNPU-220ENST00000639667 VPS16Q9H269 839 aa6.29□□□□□ -1.4
HNRNPU-220ENST00000639667 TAB2Q9NYJ8 693 aa6.29□□□□□ -1.4
HNRNPU-220ENST00000639667 RWDD2AQ9UIY3 292 aa6.29□□□□□ -1.4
HNRNPU-220ENST00000639667 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.29□□□□□ -1.4
HNRNPU-220ENST00000639667 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.29□□□□□ -1.4
HNRNPU-220ENST00000639667 C9IYK1 514 aa6.29□□□□□ -1.4
HNRNPU-220ENST00000639667 TADA2AO75478 443 aa6.29□□□□□ -1.4
HNRNPU-220ENST00000639667 CXCL10P02778 98 aa6.29□□□□□ -1.4
HNRNPU-220ENST00000639667 CTNNB1P35222 781 aa6.29□□□□□ -1.4
HNRNPU-220ENST00000639667 PBX3P40426 434 aa6.29□□□□□ -1.4
HNRNPU-220ENST00000639667 GRM5P41594 1212 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms