RNA–Protein interactions for RNA: ENST00000639629.1

CCDC7-215, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC7, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-215ENST00000639629 SH3RF3Q8TEJ3 882 aaPredicted RBP0.5□□□□□ -2.33
CCDC7-215ENST00000639629 FIZ1Q96SL8 496 aa0.5□□□□□ -2.33
CCDC7-215ENST00000639629 TYW1Q9NV66 732 aaKnown RBP0.5□□□□□ -2.33
CCDC7-215ENST00000639629 MARCH2Q9P0N8 246 aa0.5□□□□□ -2.33
CCDC7-215ENST00000639629 HSFX1Q9UBD0 423 aa0.5□□□□□ -2.33
CCDC7-215ENST00000639629 ZNF70Q9UC06 446 aaPredicted RBP0.5□□□□□ -2.33
CCDC7-215ENST00000639629 A0A1B0GUV1 79 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 PRSS38A1L453 326 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 FKTNO75072 461 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 CBFA2T3O75081 653 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 RAC3P60763 192 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 HOXA4Q00056 320 aaPredicted RBP0.49□□□□□ -2.33
CCDC7-215ENST00000639629 PABPC4Q13310 644 aaKnown RBP eCLIP0.49□□□□□ -2.33
CCDC7-215ENST00000639629 CRY1Q16526 586 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 ZNF517Q6ZMY9 492 aaPredicted RBP0.49□□□□□ -2.33
CCDC7-215ENST00000639629 PTRH1Q86Y79 214 aaKnown RBP0.49□□□□□ -2.33
CCDC7-215ENST00000639629 IFNL2Q8IZJ0 200 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 CDYL2Q8N8U2 506 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 WASF1Q92558 559 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 FERD3LQ96RJ6 166 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 MLST8Q9BVC4 326 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 BOCQ9BWV1 1114 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 LGR4Q9BXB1 951 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 IL23AQ9NPF7 189 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 TLR9Q9NR96 1032 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 USP40Q9NVE5 1235 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 C11orf21Q9P2W6 132 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 PPP1R1BQ9UD71 204 aaPredicted RBP0.49□□□□□ -2.33
CCDC7-215ENST00000639629 LRP12Q9Y561 859 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 SSU72P8A0A1W2PR75 194 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 ADCY6O43306 1168 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 BCAR3O75815 825 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 HNRNPLP14866 589 aaKnown RBP eCLIP0.49□□□□□ -2.33
CCDC7-215ENST00000639629 VAV2P52735 878 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 CD69Q07108 199 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 FSCN1Q16658 493 aaKnown RBP0.49□□□□□ -2.33
CCDC7-215ENST00000639629 LSM12Q3MHD2 195 aaKnown RBP0.49□□□□□ -2.33
CCDC7-215ENST00000639629 USP39Q53GS9 565 aaKnown RBP0.49□□□□□ -2.33
CCDC7-215ENST00000639629 TMEM132EQ6IEE7 984 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 DRC7Q8IY82 874 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 HAS1Q92839 578 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 WBP1Q96G27 269 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 ZNF496Q96IT1 587 aaPredicted RBP0.49□□□□□ -2.33
CCDC7-215ENST00000639629 MSLNLQ96KJ4 702 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 ZDHHC15Q96MV8 337 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 NUP88Q99567 741 aaPredicted RBP0.49□□□□□ -2.33
CCDC7-215ENST00000639629 JAM3Q9BX67 310 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 GPRC5DQ9NZD1 345 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 ZBTB32Q9Y2Y4 487 aaPredicted RBP0.49□□□□□ -2.33
CCDC7-215ENST00000639629 COL4A4P53420 1690 aaPredicted RBP0.49□□□□□ -2.33
CCDC7-215ENST00000639629 COL15A1P39059 1388 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 UBR4Q5T4S7 5183 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 F6X3S4 739 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 GRM6O15303 877 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 SLC16A6O15403 523 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 CRTAMO95727 393 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 RBP3P10745 1247 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 CKBP12277 381 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 GYPEP15421 78 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 AKAP5P24588 427 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 MGAT1P26572 445 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 IFRD2Q12894 506 aaPredicted RBP0.49□□□□□ -2.33
CCDC7-215ENST00000639629 TTC38Q5R3I4 469 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 HECTD2Q5U5R9 776 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 EGFLAMQ63HQ2 1017 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 CDCA2Q69YH5 1023 aaPredicted RBP0.49□□□□□ -2.33
CCDC7-215ENST00000639629 LAIR1Q6GTX8 287 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 TEX2Q8IWB9 1127 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 IL17RAQ96F46 866 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 ZNF768Q9H5H4 540 aaKnown RBP0.49□□□□□ -2.33
CCDC7-215ENST00000639629 L2HGDHQ9H9P8 463 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 TCAF1Q9Y4C2 921 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 HSPG2P98160 4391 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 AATKQ6ZMQ8 1374 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 CUL9Q8IWT3 2517 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 CCDC151A5D8V7 595 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 NPIPB8E9PQR5 432 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 H7C1Q1 480 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 IGLV2-14P01704 120 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 FTH1P19P0C7X4 201 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 STAT5AP42229 794 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 AGFG1P52594 562 aaKnown RBP0.49□□□□□ -2.33
CCDC7-215ENST00000639629 DGCR2P98153 550 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 TRIM25Q14258 630 aaKnown RBP0.49□□□□□ -2.33
CCDC7-215ENST00000639629 C8orf58Q8NAV2 365 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 OR7D4Q8NG98 312 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 ST8SIA2Q92186 375 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 MSI2Q96DH6 328 aaKnown RBP0.49□□□□□ -2.33
CCDC7-215ENST00000639629 MARK4Q96L34 752 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 BCAS3Q9H6U6 928 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 PTCH2Q9Y6C5 1203 aa0.49□□□□□ -2.33
CCDC7-215ENST00000639629 ZNF804BA4D1E1 1349 aa0.48□□□□□ -2.33
CCDC7-215ENST00000639629 BRINP1O60477 761 aa0.48□□□□□ -2.33
CCDC7-215ENST00000639629 DNAJC6O75061 913 aa0.48□□□□□ -2.33
CCDC7-215ENST00000639629 RFPL1O75677 317 aa0.48□□□□□ -2.33
CCDC7-215ENST00000639629 ENPP1P22413 925 aa0.48□□□□□ -2.33
CCDC7-215ENST00000639629 GZMKP49863 264 aa0.48□□□□□ -2.33
CCDC7-215ENST00000639629 SIM1P81133 766 aaPredicted RBP0.48□□□□□ -2.33
CCDC7-215ENST00000639629 POU5F1BQ06416 359 aa0.48□□□□□ -2.33
CCDC7-215ENST00000639629 UBE3CQ15386 1083 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms