RNA–Protein interactions for RNA: ENST00000637774.1

CACNA1A-248, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,381 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-248ENST00000637774 SLC39A4Q6P5W5 647 aa10.41□□□□□ -0.74
CACNA1A-248ENST00000637774 NOP9Q86U38 636 aaKnown RBP10.41□□□□□ -0.74
CACNA1A-248ENST00000637774 C11orf70Q9BRQ4 267 aa10.41□□□□□ -0.74
CACNA1A-248ENST00000637774 STIM2Q9P246 746 aa10.41□□□□□ -0.74
CACNA1A-248ENST00000637774 PGRMC1O00264 195 aaKnown RBP10.4□□□□□ -0.74
CACNA1A-248ENST00000637774 SLC25A27O95847 323 aa10.4□□□□□ -0.74
CACNA1A-248ENST00000637774 PRKCBP05771 671 aa10.4□□□□□ -0.74
CACNA1A-248ENST00000637774 TNFSF9P41273 254 aa10.4□□□□□ -0.74
CACNA1A-248ENST00000637774 NOL9Q5SY16 702 aaKnown RBP10.4□□□□□ -0.74
CACNA1A-248ENST00000637774 AADACL2Q6P093 401 aa10.4□□□□□ -0.74
CACNA1A-248ENST00000637774 LLGL2Q6P1M3 1020 aa10.4□□□□□ -0.74
CACNA1A-248ENST00000637774 IFT20Q8IY31 132 aa10.4□□□□□ -0.74
CACNA1A-248ENST00000637774 CEP120Q8N960 986 aa10.4□□□□□ -0.74
CACNA1A-248ENST00000637774 GPRC5AQ8NFJ5 357 aa10.4□□□□□ -0.74
CACNA1A-248ENST00000637774 KREMEN1Q96MU8 473 aa10.4□□□□□ -0.74
CACNA1A-248ENST00000637774 SYNGAP1Q96PV0 1343 aa10.4□□□□□ -0.74
CACNA1A-248ENST00000637774 APOL6Q9BWW8 343 aa10.4□□□□□ -0.74
CACNA1A-248ENST00000637774 CNOT8Q9UFF9 292 aaKnown RBP10.4□□□□□ -0.74
CACNA1A-248ENST00000637774 PTPN22Q9Y2R2 807 aa10.4□□□□□ -0.74
CACNA1A-248ENST00000637774 NOC2LQ9Y3T9 749 aaKnown RBP10.4□□□□□ -0.74
CACNA1A-248ENST00000637774 ANKRD62A6NC57 917 aa10.4□□□□□ -0.74
CACNA1A-248ENST00000637774 IQCA1LA6NCM1 817 aa10.4□□□□□ -0.74
CACNA1A-248ENST00000637774 ZRANB2O95218 330 aaKnown RBP eCLIP10.4□□□□□ -0.74
CACNA1A-248ENST00000637774 LCA5LO95447 670 aa10.4□□□□□ -0.74
CACNA1A-248ENST00000637774 CHRM1P11229 460 aaPredicted RBP10.4□□□□□ -0.74
CACNA1A-248ENST00000637774 ITGA4P13612 1032 aa10.4□□□□□ -0.74
CACNA1A-248ENST00000637774 NSFP46459 744 aaKnown RBP10.4□□□□□ -0.74
CACNA1A-248ENST00000637774 CARSP49589 748 aaKnown RBP10.4□□□□□ -0.74
CACNA1A-248ENST00000637774 VPS41P49754 854 aa10.4□□□□□ -0.74
CACNA1A-248ENST00000637774 GPC5P78333 572 aa10.4□□□□□ -0.74
CACNA1A-248ENST00000637774 MEI1Q5TIA1 1274 aa10.4□□□□□ -0.74
CACNA1A-248ENST00000637774 FMNL3Q8IVF7 1028 aa10.4□□□□□ -0.74
CACNA1A-248ENST00000637774 MSANTD4Q8NCY6 345 aa10.4□□□□□ -0.74
CACNA1A-248ENST00000637774 AFG1LQ8WV93 481 aa10.4□□□□□ -0.74
CACNA1A-248ENST00000637774 SPIRE2Q8WWL2 714 aa10.4□□□□□ -0.74
CACNA1A-248ENST00000637774 NLRP7Q8WX94 980 aa10.4□□□□□ -0.74
CACNA1A-248ENST00000637774 NUP85Q9BW27 656 aa10.4□□□□□ -0.74
CACNA1A-248ENST00000637774 CELF4Q9BZC1 486 aaKnown RBP10.4□□□□□ -0.74
CACNA1A-248ENST00000637774 PNMA3Q9UL41 463 aa10.4□□□□□ -0.74
CACNA1A-248ENST00000637774 ADAMTS5Q9UNA0 930 aa10.4□□□□□ -0.74
CACNA1A-248ENST00000637774 GREB1LQ9C091 1923 aaPredicted RBP10.4□□□□□ -0.75
CACNA1A-248ENST00000637774 A0A0G2JLL6 359 aaPredicted RBP10.4□□□□□ -0.75
CACNA1A-248ENST00000637774 GOLGA6L10A0A0M3HER8 536 aa10.4□□□□□ -0.75
CACNA1A-248ENST00000637774 GOLGA6BA6NDN3 693 aa10.4□□□□□ -0.75
CACNA1A-248ENST00000637774 TTLL13PA6NNM8 815 aa10.4□□□□□ -0.75
CACNA1A-248ENST00000637774 EXTL3O43909 919 aa10.4□□□□□ -0.75
CACNA1A-248ENST00000637774 VTNP04004 478 aa10.4□□□□□ -0.75
CACNA1A-248ENST00000637774 TUBBP07437 444 aa10.4□□□□□ -0.75
CACNA1A-248ENST00000637774 WEE2P0C1S8 567 aa10.4□□□□□ -0.75
CACNA1A-248ENST00000637774 CYP11B1P15538 503 aa10.4□□□□□ -0.75
CACNA1A-248ENST00000637774 ADORA2AP29274 412 aa10.4□□□□□ -0.75
CACNA1A-248ENST00000637774 ADCYAP1R1P41586 468 aa10.4□□□□□ -0.75
CACNA1A-248ENST00000637774 PRKCIP41743 596 aa10.4□□□□□ -0.75
CACNA1A-248ENST00000637774 JAM2P57087 298 aa10.4□□□□□ -0.75
CACNA1A-248ENST00000637774 ORC1Q13415 861 aa10.4□□□□□ -0.75
CACNA1A-248ENST00000637774 CAPSQ13938 189 aa10.4□□□□□ -0.75
CACNA1A-248ENST00000637774 TRADDQ15628 312 aa10.4□□□□□ -0.75
CACNA1A-248ENST00000637774 SH3D19Q5HYK7 790 aa10.4□□□□□ -0.75
CACNA1A-248ENST00000637774 KCTD16Q68DU8 428 aa10.4□□□□□ -0.75
CACNA1A-248ENST00000637774 PRRT2Q7Z6L0 340 aaPredicted RBP10.4□□□□□ -0.75
CACNA1A-248ENST00000637774 MTMR12Q9C0I1 747 aa10.4□□□□□ -0.75
CACNA1A-248ENST00000637774 TAF1DQ9H5J8 278 aaPredicted RBP10.4□□□□□ -0.75
CACNA1A-248ENST00000637774 SYNCQ9H7C4 482 aa10.4□□□□□ -0.75
CACNA1A-248ENST00000637774 C17orf75Q9HAS0 396 aa10.4□□□□□ -0.75
CACNA1A-248ENST00000637774 ANAPC7Q9UJX3 599 aa10.4□□□□□ -0.75
CACNA1A-248ENST00000637774 L1RE1Q9UN81 338 aa10.4□□□□□ -0.75
CACNA1A-248ENST00000637774 ALG6Q9Y672 507 aa10.4□□□□□ -0.75
CACNA1A-248ENST00000637774 ARFGEF1Q9Y6D6 1849 aa10.39□□□□□ -0.75
CACNA1A-248ENST00000637774 SMIM23A6NLE4 172 aa10.39□□□□□ -0.75
CACNA1A-248ENST00000637774 ATP2A1O14983 1001 aa10.39□□□□□ -0.75
CACNA1A-248ENST00000637774 GLI1P08151 1106 aa10.39□□□□□ -0.75
CACNA1A-248ENST00000637774 LAMTOR4Q0VGL1 99 aa10.39□□□□□ -0.75
CACNA1A-248ENST00000637774 SLFN12LQ6IEE8 588 aa10.39□□□□□ -0.75
CACNA1A-248ENST00000637774 USP50Q70EL3 339 aaPredicted RBP10.39□□□□□ -0.75
CACNA1A-248ENST00000637774 ARMCX2Q7L311 632 aa10.39□□□□□ -0.75
CACNA1A-248ENST00000637774 UBL4BQ8N7F7 174 aa10.39□□□□□ -0.75
CACNA1A-248ENST00000637774 OR5B17Q8NGF7 314 aa10.39□□□□□ -0.75
CACNA1A-248ENST00000637774 UHMK1Q8TAS1 419 aaKnown RBP10.39□□□□□ -0.75
CACNA1A-248ENST00000637774 SENP7Q9BQF6 1050 aa10.39□□□□□ -0.75
CACNA1A-248ENST00000637774 NFASCO94856 1347 aa10.39□□□□□ -0.75
CACNA1A-248ENST00000637774 CENPFP49454 3210 aa10.39□□□□□ -0.75
CACNA1A-248ENST00000637774 B4GALT5O43286 388 aa10.39□□□□□ -0.75
CACNA1A-248ENST00000637774 RAD51CO43502 376 aa10.39□□□□□ -0.75
CACNA1A-248ENST00000637774 FGFR4P22455 802 aa10.39□□□□□ -0.75
CACNA1A-248ENST00000637774 NAMPTP43490 491 aa10.39□□□□□ -0.75
CACNA1A-248ENST00000637774 SNX1Q13596 522 aa10.39□□□□□ -0.75
CACNA1A-248ENST00000637774 NCOA4Q13772 614 aa10.39□□□□□ -0.75
CACNA1A-248ENST00000637774 PRAMEF19Q5SWL8 479 aa10.39□□□□□ -0.75
CACNA1A-248ENST00000637774 DAB2IPQ5VWQ8 1189 aa10.39□□□□□ -0.75
CACNA1A-248ENST00000637774 CCNI2Q6ZMN8 369 aaPredicted RBP10.39□□□□□ -0.75
CACNA1A-248ENST00000637774 CCDC25Q86WR0 208 aa10.39□□□□□ -0.75
CACNA1A-248ENST00000637774 ZNF564Q8TBZ8 553 aaPredicted RBP10.39□□□□□ -0.75
CACNA1A-248ENST00000637774 MRPL4Q9BYD3 311 aaKnown RBP10.39□□□□□ -0.75
CACNA1A-248ENST00000637774 CPA4Q9UI42 421 aa10.39□□□□□ -0.75
CACNA1A-248ENST00000637774 KCNG1Q9UIX4 513 aa10.39□□□□□ -0.75
CACNA1A-248ENST00000637774 MYPNQ86TC9 1320 aa10.39□□□□□ -0.75
CACNA1A-248ENST00000637774 SART1O43290 800 aaKnown RBP10.39□□□□□ -0.75
CACNA1A-248ENST00000637774 HSF2BPO75031 334 aa10.39□□□□□ -0.75
CACNA1A-248ENST00000637774 MAPK4P31152 587 aa10.39□□□□□ -0.75
CACNA1A-248ENST00000637774 PPIL2Q13356 520 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms