RNA–Protein interactions for RNA: ENST00000637657.1

PCCA-215, Transcript of propionyl-CoA carboxylase subunit alpha, human

TSL 5

Gene PCCA, Length 2,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCCA-215	ENST00000637657	RBM46	Q8TBY0	533 aa	Known RBP	13.93	□□□□□ -0.18
PCCA-215	ENST00000637657	NRG4	Q8WWG1	115 aa		13.93	□□□□□ -0.18
PCCA-215	ENST00000637657	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.93	□□□□□ -0.18
PCCA-215	ENST00000637657	TRAIP	Q9BWF2	469 aa		13.93	□□□□□ -0.18
PCCA-215	ENST00000637657	CADM1	Q9BY67	442 aa	Known RBP	13.93	□□□□□ -0.18
PCCA-215	ENST00000637657	ANKRD2	Q9GZV1	360 aa		13.93	□□□□□ -0.18
PCCA-215	ENST00000637657	ZDHHC7	Q9NXF8	308 aa		13.93	□□□□□ -0.18
PCCA-215	ENST00000637657	KIF13A	Q9H1H9	1805 aa		13.93	□□□□□ -0.18
PCCA-215	ENST00000637657	HAUS5	O94927	633 aa		13.93	□□□□□ -0.18
PCCA-215	ENST00000637657	FOXN2	P32314	431 aa		13.93	□□□□□ -0.18
PCCA-215	ENST00000637657	SOX5	P35711	763 aa		13.93	□□□□□ -0.18
PCCA-215	ENST00000637657	SCNN1B	P51168	640 aa		13.93	□□□□□ -0.18
PCCA-215	ENST00000637657	USP46	P62068	366 aa		13.93	□□□□□ -0.18
PCCA-215	ENST00000637657	MPP2	Q14168	576 aa		13.93	□□□□□ -0.18
PCCA-215	ENST00000637657	EPHA7	Q15375	998 aa		13.93	□□□□□ -0.18
PCCA-215	ENST00000637657	ADRM1	Q16186	407 aa		13.93	□□□□□ -0.18
PCCA-215	ENST00000637657	KYNU	Q16719	465 aa		13.93	□□□□□ -0.18
PCCA-215	ENST00000637657	TRMT5	Q32P41	509 aa	Known RBP	13.93	□□□□□ -0.18
PCCA-215	ENST00000637657	MAP3K21	Q5TCX8	1036 aa		13.93	□□□□□ -0.18
PCCA-215	ENST00000637657	PASD1	Q8IV76	773 aa		13.93	□□□□□ -0.18
PCCA-215	ENST00000637657	SNX29	Q8TEQ0	813 aa		13.93	□□□□□ -0.18
PCCA-215	ENST00000637657	HAUS1	Q96CS2	278 aa		13.93	□□□□□ -0.18
PCCA-215	ENST00000637657	NSL1	Q96IY1	281 aa		13.93	□□□□□ -0.18
PCCA-215	ENST00000637657	PCDH18	Q9HCL0	1135 aa		13.93	□□□□□ -0.18
PCCA-215	ENST00000637657	GPAM	Q9HCL2	828 aa		13.93	□□□□□ -0.18
PCCA-215	ENST00000637657	CYLD	Q9NQC7	956 aa		13.93	□□□□□ -0.18
PCCA-215	ENST00000637657	EMILIN3	Q9NT22	766 aa		13.93	□□□□□ -0.18
PCCA-215	ENST00000637657	ZMYM2	Q9UBW7	1377 aa		13.93	□□□□□ -0.18
PCCA-215	ENST00000637657	CACNA1S	Q13698	1873 aa		13.92	□□□□□ -0.18
PCCA-215	ENST00000637657	TSPY2	A6NKD2	308 aa		13.92	□□□□□ -0.18
PCCA-215	ENST00000637657	NDC80	O14777	642 aa		13.92	□□□□□ -0.18
PCCA-215	ENST00000637657	ADAMTS3	O15072	1205 aa		13.92	□□□□□ -0.18
PCCA-215	ENST00000637657	SORBS3	O60504	671 aa		13.92	□□□□□ -0.18
PCCA-215	ENST00000637657	VAV1	P15498	845 aa		13.92	□□□□□ -0.18
PCCA-215	ENST00000637657	NR2F2	P24468	414 aa		13.92	□□□□□ -0.18
PCCA-215	ENST00000637657	RTP1	P59025	263 aa		13.92	□□□□□ -0.18
PCCA-215	ENST00000637657	CYLC2	Q14093	348 aa	Predicted RBP	13.92	□□□□□ -0.18
PCCA-215	ENST00000637657	CTC1	Q2NKJ3	1217 aa		13.92	□□□□□ -0.18
PCCA-215	ENST00000637657	WDR72	Q3MJ13	1102 aa		13.92	□□□□□ -0.18
PCCA-215	ENST00000637657	ESCO1	Q5FWF5	840 aa		13.92	□□□□□ -0.18
PCCA-215	ENST00000637657	PNMA1	Q8ND90	353 aa		13.92	□□□□□ -0.18
PCCA-215	ENST00000637657	DGCR14	Q96DF8	476 aa	Known RBP	13.92	□□□□□ -0.18
PCCA-215	ENST00000637657	NLRP3	Q96P20	1036 aa		13.92	□□□□□ -0.18
PCCA-215	ENST00000637657	ECSIT	Q9BQ95	431 aa		13.92	□□□□□ -0.18
PCCA-215	ENST00000637657	STK33	Q9BYT3	514 aa		13.92	□□□□□ -0.18
PCCA-215	ENST00000637657	OSGEP	Q9NPF4	335 aa		13.92	□□□□□ -0.18
PCCA-215	ENST00000637657	STK32B	Q9NY57	414 aa		13.92	□□□□□ -0.18
PCCA-215	ENST00000637657	EURL	Q9NYK6	297 aa		13.92	□□□□□ -0.18
PCCA-215	ENST00000637657	ANKFY1	Q9P2R3	1169 aa		13.92	□□□□□ -0.18
PCCA-215	ENST00000637657	NAALADL1	Q9UQQ1	740 aa		13.92	□□□□□ -0.18
PCCA-215	ENST00000637657	IRS4	O14654	1257 aa	Predicted RBP	13.91	□□□□□ -0.18
PCCA-215	ENST00000637657	FKBP6	O75344	327 aa		13.91	□□□□□ -0.18
PCCA-215	ENST00000637657	MTA2	O94776	668 aa		13.91	□□□□□ -0.18
PCCA-215	ENST00000637657	CBX6	O95503	412 aa		13.91	□□□□□ -0.18
PCCA-215	ENST00000637657	SLC9A1	P19634	815 aa		13.91	□□□□□ -0.18
PCCA-215	ENST00000637657	RAB15	P59190	212 aa		13.91	□□□□□ -0.18
PCCA-215	ENST00000637657	IRX4	P78413	519 aa		13.91	□□□□□ -0.18
PCCA-215	ENST00000637657	MAP3K10	Q02779	954 aa		13.91	□□□□□ -0.18
PCCA-215	ENST00000637657	GRM2	Q14416	872 aa		13.91	□□□□□ -0.18
PCCA-215	ENST00000637657	LRRC41	Q15345	812 aa		13.91	□□□□□ -0.18
PCCA-215	ENST00000637657	NET1	Q7Z628	596 aa	Predicted RBP	13.91	□□□□□ -0.18
PCCA-215	ENST00000637657	ZNF554	Q86TJ5	538 aa		13.91	□□□□□ -0.18
PCCA-215	ENST00000637657	SLC13A5	Q86YT5	568 aa	Predicted RBP	13.91	□□□□□ -0.18
PCCA-215	ENST00000637657	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	13.91	□□□□□ -0.18
PCCA-215	ENST00000637657	DENND1A	Q8TEH3	1009 aa		13.91	□□□□□ -0.18
PCCA-215	ENST00000637657	NAP1L4	Q99733	375 aa	Known RBP	13.91	□□□□□ -0.18
PCCA-215	ENST00000637657	KRT82	Q9NSB4	513 aa		13.91	□□□□□ -0.18
PCCA-215	ENST00000637657	ABCF2	Q9UG63	623 aa		13.91	□□□□□ -0.18
PCCA-215	ENST00000637657	ZNF232	Q9UNY5	417 aa		13.91	□□□□□ -0.18
PCCA-215	ENST00000637657	ZNF148	Q9UQR1	794 aa		13.91	□□□□□ -0.18
PCCA-215	ENST00000637657	ALG6	Q9Y672	507 aa		13.91	□□□□□ -0.18
PCCA-215	ENST00000637657	PDXK	O00764	312 aa		13.91	□□□□□ -0.18
PCCA-215	ENST00000637657	KRT36	O76013	467 aa		13.91	□□□□□ -0.18
PCCA-215	ENST00000637657	CREB1	P16220	341 aa		13.91	□□□□□ -0.18
PCCA-215	ENST00000637657	TXK	P42681	527 aa		13.91	□□□□□ -0.18
PCCA-215	ENST00000637657	NAPA	P54920	295 aa		13.91	□□□□□ -0.18
PCCA-215	ENST00000637657	WDR4	P57081	412 aa	Known RBP	13.91	□□□□□ -0.18
PCCA-215	ENST00000637657	DNAJC3	Q13217	504 aa		13.91	□□□□□ -0.18
PCCA-215	ENST00000637657	PTK6	Q13882	451 aa		13.91	□□□□□ -0.18
PCCA-215	ENST00000637657	PTPRO	Q16827	1216 aa		13.91	□□□□□ -0.18
PCCA-215	ENST00000637657	TTC27	Q6P3X3	843 aa		13.91	□□□□□ -0.18
PCCA-215	ENST00000637657	NLRP10	Q86W26	655 aa		13.91	□□□□□ -0.18
PCCA-215	ENST00000637657	SMYD1	Q8NB12	490 aa		13.91	□□□□□ -0.18
PCCA-215	ENST00000637657	ALG3	Q92685	438 aa		13.91	□□□□□ -0.18
PCCA-215	ENST00000637657	PTCD3	Q96EY7	689 aa	Known RBP	13.91	□□□□□ -0.18
PCCA-215	ENST00000637657	CFAP57	Q96MR6	1250 aa		13.91	□□□□□ -0.18
PCCA-215	ENST00000637657	MPHOSPH6	Q99547	160 aa	Known RBP	13.91	□□□□□ -0.18
PCCA-215	ENST00000637657	MIPEP	Q99797	713 aa		13.91	□□□□□ -0.18
PCCA-215	ENST00000637657	OSBPL8	Q9BZF1	889 aa		13.91	□□□□□ -0.18
PCCA-215	ENST00000637657	NDE1	Q9NXR1	346 aa		13.91	□□□□□ -0.18
PCCA-215	ENST00000637657	SH3GLB1	Q9Y371	365 aa		13.91	□□□□□ -0.18
PCCA-215	ENST00000637657	PCDHA2	Q9Y5H9	948 aa		13.91	□□□□□ -0.18
PCCA-215	ENST00000637657	KIAA1551	Q9HCM1	1747 aa		13.91	□□□□□ -0.18
PCCA-215	ENST00000637657	HGS	O14964	777 aa	Predicted RBP	13.9	□□□□□ -0.18
PCCA-215	ENST00000637657	AP1G1	O43747	822 aa		13.9	□□□□□ -0.18
PCCA-215	ENST00000637657	CIB2	O75838	187 aa		13.9	□□□□□ -0.18
PCCA-215	ENST00000637657	ATP5B	P06576	529 aa	Known RBP	13.9	□□□□□ -0.18
PCCA-215	ENST00000637657	VIL1	P09327	827 aa	Known RBP	13.9	□□□□□ -0.18
PCCA-215	ENST00000637657	VEGFA	P15692	232 aa	Predicted RBP	13.9	□□□□□ -0.18
PCCA-215	ENST00000637657	HPCA	P84074	193 aa		13.9	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms