RNA–Protein interactions for RNA: ENST00000636709.1

CHRNA7-219, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

Gene CHRNA7, Length 7,722 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-219ENST00000636709 MAD2L2Q9UI95 211 aa9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 PPIEQ9UNP9 301 aaKnown RBP9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 PLEKHG1Q9ULL1 1385 aa9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 ZMYM4Q5VZL5 1548 aa9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 ZNF211Q13398 564 aaPredicted RBP9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 MORF4L2Q15014 288 aa9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 IRAK1BP1Q5VVH5 260 aa9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 HES6Q96HZ4 224 aa9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 PNMA5Q96PV4 448 aa9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 GPR63Q9BZJ6 419 aa9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 NDST4Q9H3R1 872 aa9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 KIAA1586Q9HCI6 787 aa9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 KDM6BO15054 1643 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 A6NNZ2 444 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 LZTS3O60299 673 aaPredicted RBP9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 NCALDP61601 193 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 TUBB8Q3ZCM7 444 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 ZRANB3Q5FWF4 1079 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 CARNMT1Q8N4J0 409 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 BCAS4Q8TDM0 211 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 CLMNQ96JQ2 1002 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 PNKPQ96T60 521 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 SPATA16Q9BXB7 569 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 SMARCAD1Q9H4L7 1026 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 NAGPAQ9UK23 515 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 AKR1B1P15121 316 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 BRD2P25440 801 aaKnown RBP9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 PWP1Q13610 501 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 GRAMD1BQ3KR37 738 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 KHDRBS2Q5VWX1 349 aaKnown RBP9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 ZNF614Q8N883 585 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 JADE3Q92613 823 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 SERPINI1Q99574 410 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 TSEN34Q9BSV6 310 aaKnown RBP9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 ZMYND12Q9H0C1 365 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 OSGEPL1Q9H4B0 414 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 CYP26B1Q9NR63 512 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 TMEM39AQ9NV64 488 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 MID2Q9UJV3 735 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 KCNN4O15554 427 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 PJA2O43164 708 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 MYL4P12829 197 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 TBXAS1P24557 533 aaPredicted RBP9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 EPHX2P34913 555 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 COASYQ13057 564 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 EFTUD2Q15029 972 aaKnown RBP eCLIP9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 GLRA4Q5JXX5 417 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 TDRD7Q8NHU6 1098 aaKnown RBP9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 PPP1R13BQ96KQ4 1090 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 SPACA7Q96KW9 195 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 ING2Q9H160 280 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 PDE11AQ9HCR9 933 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 IMPDH2P12268 514 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 ARL4CP56559 192 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 SLC39A14Q15043 492 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 ITPRIPL1Q6GPH6 555 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 FMO2Q99518 471 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 ROBO2Q9HCK4 1378 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 ESRRAP11474 423 aaPredicted RBP9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 RAG1P15918 1043 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 AARSP49588 968 aaKnown RBP eCLIP9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 BCAR1P56945 870 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 ESRRGP62508 458 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 GFPT1Q06210 699 aaPredicted RBP9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 ALFQ53S48 1182 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 TDRD10Q5VZ19 366 aaKnown RBP9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 KCNV1Q6PIU1 500 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 CCDC197Q8NCU1 140 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 NSUN7Q8NE18 718 aaKnown RBP9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 RAD54LQ92698 747 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 ELMO2Q96JJ3 720 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 TMEM63CQ9P1W3 806 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 PPARGC1AQ9UBK2 798 aaKnown RBP9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 PACSIN2Q9UNF0 486 aaPredicted RBP9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 GTF2A1LQ9UNN4 478 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 PCDHA10Q9Y5I2 948 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 OVOS2A0A0G2JMS6 1433 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 OVOS2A0A0J9YW53 1432 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 OVOS2Q6IE36 1432 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 NDUFS3O75489 264 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 PCDH8O95206 1070 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 MBL2P11226 248 aaPredicted RBP9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 RALBP11234 206 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 SLC16A1P53985 500 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 PLA2G4FQ68DD2 849 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 TBC1D1Q86TI0 1168 aaPredicted RBP9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 PHACTR4Q8IZ21 702 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 LMBRD1Q9NUN5 540 aa9.38□□□□□ -0.91
CHRNA7-219ENST00000636709 ZRANB2O95218 330 aaKnown RBP eCLIP9.37□□□□□ -0.91
CHRNA7-219ENST00000636709 GUCA1CO95843 209 aa9.37□□□□□ -0.91
CHRNA7-219ENST00000636709 ERVK-10P10266 1014 aa9.37□□□□□ -0.91
CHRNA7-219ENST00000636709 GTF2A2P52657 109 aa9.37□□□□□ -0.91
CHRNA7-219ENST00000636709 SESN2P58004 480 aaPredicted RBP9.37□□□□□ -0.91
CHRNA7-219ENST00000636709 PTPN12Q05209 780 aaKnown RBP9.37□□□□□ -0.91
CHRNA7-219ENST00000636709 TMEM132BQ14DG7 1078 aa9.37□□□□□ -0.91
CHRNA7-219ENST00000636709 ANKS6Q68DC2 871 aa9.37□□□□□ -0.91
CHRNA7-219ENST00000636709 PTRHD1Q6GMV3 140 aaKnown RBP9.37□□□□□ -0.91
CHRNA7-219ENST00000636709 RFX8Q6ZV50 586 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms