RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	COBLL1	Q53SF7	1204 aa		11.5	□□□□□ -0.57
CHD2-223	ENST00000636306	FKBP1C	Q5VVH2	108 aa		11.5	□□□□□ -0.57
CHD2-223	ENST00000636306	SNX30	Q5VWJ9	437 aa		11.5	□□□□□ -0.57
CHD2-223	ENST00000636306	PDXDC1	Q6P996	788 aa		11.5	□□□□□ -0.57
CHD2-223	ENST00000636306	RSBN1L	Q6PCB5	846 aa	Predicted RBP	11.5	□□□□□ -0.57
CHD2-223	ENST00000636306	CCDC84	Q86UT8	332 aa	Predicted RBP	11.5	□□□□□ -0.57
CHD2-223	ENST00000636306	CCNJL	Q8IV13	435 aa		11.5	□□□□□ -0.57
CHD2-223	ENST00000636306	RASGEF1C	Q8N431	466 aa		11.5	□□□□□ -0.57
CHD2-223	ENST00000636306	NAT14	Q8WUY8	206 aa		11.5	□□□□□ -0.57
CHD2-223	ENST00000636306	SCG3	Q8WXD2	468 aa	Known RBP	11.5	□□□□□ -0.57
CHD2-223	ENST00000636306	FMO2	Q99518	471 aa		11.5	□□□□□ -0.57
CHD2-223	ENST00000636306	C7orf25	Q9BPX7	421 aa		11.5	□□□□□ -0.57
CHD2-223	ENST00000636306	NOC4L	Q9BVI4	516 aa	Known RBP	11.5	□□□□□ -0.57
CHD2-223	ENST00000636306	AMN	Q9BXJ7	453 aa		11.5	□□□□□ -0.57
CHD2-223	ENST00000636306	OXCT2	Q9BYC2	517 aa	Predicted RBP	11.5	□□□□□ -0.57
CHD2-223	ENST00000636306	DNAJC18	Q9H819	358 aa		11.5	□□□□□ -0.57
CHD2-223	ENST00000636306	FGFR1OP2	Q9NVK5	253 aa		11.5	□□□□□ -0.57
CHD2-223	ENST00000636306	RHBDL2	Q9NX52	303 aa		11.5	□□□□□ -0.57
CHD2-223	ENST00000636306	TUBA8	Q9NY65	449 aa	Predicted RBP	11.5	□□□□□ -0.57
CHD2-223	ENST00000636306	ZNF219	Q9P2Y4	722 aa	Predicted RBP	11.5	□□□□□ -0.57
CHD2-223	ENST00000636306	HSFX1	Q9UBD0	423 aa		11.5	□□□□□ -0.57
CHD2-223	ENST00000636306	GDA	Q9Y2T3	454 aa		11.5	□□□□□ -0.57
CHD2-223	ENST00000636306	ATP8B3	O60423	1300 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	DDTL	A6NHG4	134 aa	Predicted RBP	11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	MAP3K7	O43318	606 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	FOS	P01100	380 aa	Predicted RBP	11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	LYN	P07948	512 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	GM2A	P17900	193 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	CCNE1	P24864	410 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	KLK7	P49862	253 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	USP11	P51784	963 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	DRG2	P55039	364 aa	Known RBP	11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	OXCT1	P55809	520 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	ASIC1	P78348	528 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	SLC34A1	Q06495	639 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	ADRM1	Q16186	407 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	MIIP	Q5JXC2	388 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	C10orf76	Q5T2E6	689 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	CCDC174	Q6PII3	467 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	MARK2	Q7KZI7	788 aa	Known RBP	11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	SV2B	Q7L1I2	683 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	ALDH16A1	Q8IZ83	802 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	GIMAP8	Q8ND71	665 aa	Predicted RBP	11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	SLC17A8	Q8NDX2	589 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	ERMN	Q8TAM6	284 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	SPIRE2	Q8WWL2	714 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	CLMN	Q96JQ2	1002 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	FAM81B	Q96LP2	452 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	MTMR9	Q96QG7	549 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	DUSP9	Q99956	384 aa	Known RBP	11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	NT5C3A	Q9H0P0	336 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	ASCC2	Q9H1I8	757 aa	Predicted RBP	11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	EPB41L4B	Q9H329	900 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	ZNF212	Q9UDV6	495 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	SIK3	Q9Y2K2	1263 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306		A0A0J9YVX5	310 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	TRIM49B	A6NDI0	452 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	FAM187A	A6NFU0	413 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	HNRNPR	O43390	633 aa	Known RBP	11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	FGFR1OP	O95684	399 aa	Known RBP	11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	FTCD	O95954	541 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	CYP1A1	P04798	512 aa	Predicted RBP	11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	PIM1	P11309	404 aa	Predicted RBP	11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	VAV1	P15498	845 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	PAX3	P23760	479 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	MARK3	P27448	753 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	ATP5D	P30049	168 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	TEC	P42680	631 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	TXK	P42681	527 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	SESN3	P58005	492 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	PPARD	Q03181	441 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	EN1	Q05925	392 aa	Predicted RBP	11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	EHHADH	Q08426	723 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	IK	Q13123	557 aa	Predicted RBP	11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	DLGAP5	Q15398	846 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	QRICH1	Q2TAL8	776 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	SLC44A4	Q53GD3	710 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	NAALADL2	Q58DX5	795 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	LRRC74B	Q6ZQY2	392 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	KCTD1	Q719H9	257 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	ZC3H18	Q86VM9	953 aa	Known RBP	11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	VSIG1	Q86XK7	387 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	CLEC10A	Q8IUN9	316 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	SLFN12	Q8IYM2	578 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	ST13P4	Q8IZP2	240 aa	Predicted RBP	11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	LARGE2	Q8N3Y3	721 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	CSGALNACT2	Q8N6G5	542 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	DIS3L	Q8TF46	1054 aa	Known RBP	11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	STAM	Q92783	540 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	CNOT6L	Q96LI5	555 aa	Known RBP	11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	CSRNP1	Q96S65	589 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	TRIM9	Q9C026	710 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	MTFR1L	Q9H019	292 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	NLRC4	Q9NPP4	1024 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	TMEM260	Q9NX78	707 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	PTTG2	Q9NZH5	202 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	GGT7	Q9UJ14	662 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	PCDHA1	Q9Y5I3	950 aa		11.49	□□□□□ -0.57
CHD2-223	ENST00000636306	PVALEF	A0A1B0GWK0	134 aa		11.48	□□□□□ -0.57
CHD2-223	ENST00000636306	PP2D1	A8MPX8	630 aa		11.48	□□□□□ -0.57

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