RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 SNRPFP62306 86 aaKnown RBP11.48□□□□□ -0.57
PSPC1-207ENST00000635251 ANKRD20A8PQ5CZ79 823 aa11.48□□□□□ -0.57
PSPC1-207ENST00000635251 NIPA1Q7RTP0 329 aa11.48□□□□□ -0.57
PSPC1-207ENST00000635251 ANKS4BQ8N8V4 417 aa11.48□□□□□ -0.57
PSPC1-207ENST00000635251 CCDC197Q8NCU1 140 aa11.48□□□□□ -0.57
PSPC1-207ENST00000635251 SHC3Q92529 594 aa11.48□□□□□ -0.57
PSPC1-207ENST00000635251 CD101Q93033 1021 aa11.48□□□□□ -0.57
PSPC1-207ENST00000635251 POP1Q99575 1024 aaKnown RBP11.48□□□□□ -0.57
PSPC1-207ENST00000635251 TMEM39BQ9GZU3 492 aa11.48□□□□□ -0.57
PSPC1-207ENST00000635251 SLC40A1Q9NP59 571 aa11.48□□□□□ -0.57
PSPC1-207ENST00000635251 KLC4Q9NSK0 619 aa11.48□□□□□ -0.57
PSPC1-207ENST00000635251 INTS9Q9NV88 658 aaKnown RBP11.48□□□□□ -0.57
PSPC1-207ENST00000635251 UVRAGQ9P2Y5 699 aa11.48□□□□□ -0.57
PSPC1-207ENST00000635251 GTF3C4Q9UKN8 822 aa11.48□□□□□ -0.57
PSPC1-207ENST00000635251 APBA3O96018 575 aa11.48□□□□□ -0.57
PSPC1-207ENST00000635251 RARGP13631 454 aa11.48□□□□□ -0.57
PSPC1-207ENST00000635251 KRT5P13647 590 aa11.48□□□□□ -0.57
PSPC1-207ENST00000635251 EIF2AK2P19525 551 aaKnown RBP11.48□□□□□ -0.57
PSPC1-207ENST00000635251 NCKAP1LP55160 1127 aa11.48□□□□□ -0.57
PSPC1-207ENST00000635251 CDR2Q01850 454 aa11.48□□□□□ -0.57
PSPC1-207ENST00000635251 SF3A3Q12874 501 aaKnown RBP eCLIP11.48□□□□□ -0.57
PSPC1-207ENST00000635251 UGCGQ16739 394 aa11.48□□□□□ -0.57
PSPC1-207ENST00000635251 UBAP2Q5T6F2 1119 aaKnown RBP11.48□□□□□ -0.57
PSPC1-207ENST00000635251 PLA2G4FQ68DD2 849 aa11.48□□□□□ -0.57
PSPC1-207ENST00000635251 RSBN1LQ6PCB5 846 aaPredicted RBP11.48□□□□□ -0.57
PSPC1-207ENST00000635251 CYFIP1Q7L576 1253 aa11.48□□□□□ -0.57
PSPC1-207ENST00000635251 CDAN1Q8IWY9 1227 aa11.48□□□□□ -0.57
PSPC1-207ENST00000635251 TMEM174Q8WUU8 243 aa11.48□□□□□ -0.57
PSPC1-207ENST00000635251 ART4Q93070 314 aa11.48□□□□□ -0.57
PSPC1-207ENST00000635251 TIPINQ9BVW5 301 aa11.48□□□□□ -0.57
PSPC1-207ENST00000635251 ST6GALNAC4Q9H4F1 302 aa11.48□□□□□ -0.57
PSPC1-207ENST00000635251 TBC1D22BQ9NU19 505 aa11.48□□□□□ -0.57
PSPC1-207ENST00000635251 UBIAD1Q9Y5Z9 338 aa11.48□□□□□ -0.57
PSPC1-207ENST00000635251 LOXHD1Q8IVV2 1947 aa11.47□□□□□ -0.57
PSPC1-207ENST00000635251 DNM1LO00429 736 aa11.47□□□□□ -0.57
PSPC1-207ENST00000635251 PMM2O15305 246 aa11.47□□□□□ -0.57
PSPC1-207ENST00000635251 CLDN3O15551 220 aa11.47□□□□□ -0.57
PSPC1-207ENST00000635251 PTGER2P43116 358 aa11.47□□□□□ -0.57
PSPC1-207ENST00000635251 PSMC5P62195 406 aa11.47□□□□□ -0.57
PSPC1-207ENST00000635251 MRPS9P82933 396 aaKnown RBP11.47□□□□□ -0.57
PSPC1-207ENST00000635251 SNX1Q13596 522 aa11.47□□□□□ -0.57
PSPC1-207ENST00000635251 CYP1B1Q16678 543 aa11.47□□□□□ -0.57
PSPC1-207ENST00000635251 SGO2Q562F6 1265 aa11.47□□□□□ -0.57
PSPC1-207ENST00000635251 PCNX4Q63HM2 1172 aa11.47□□□□□ -0.57
PSPC1-207ENST00000635251 TAOK1Q7L7X3 1001 aa11.47□□□□□ -0.57
PSPC1-207ENST00000635251 SLC17A8Q8NDX2 589 aa11.47□□□□□ -0.57
PSPC1-207ENST00000635251 FBXL13Q8NEE6 735 aa11.47□□□□□ -0.57
PSPC1-207ENST00000635251 C1orf54Q8WWF1 131 aa11.47□□□□□ -0.57
PSPC1-207ENST00000635251 ELMO3Q96BJ8 720 aa11.47□□□□□ -0.57
PSPC1-207ENST00000635251 PRMT1Q99873 361 aaKnown RBP11.47□□□□□ -0.57
PSPC1-207ENST00000635251 KIFC3Q9BVG8 833 aa11.47□□□□□ -0.57
PSPC1-207ENST00000635251 ZNF341Q9BYN7 854 aa11.47□□□□□ -0.57
PSPC1-207ENST00000635251 RAVER2Q9HCJ3 691 aaKnown RBP11.47□□□□□ -0.57
PSPC1-207ENST00000635251 TMEM8AQ9HCN3 771 aa11.47□□□□□ -0.57
PSPC1-207ENST00000635251 TOPORSQ9NS56 1045 aaPredicted RBP11.47□□□□□ -0.57
PSPC1-207ENST00000635251 SAMD15Q9P1V8 674 aa11.47□□□□□ -0.57
PSPC1-207ENST00000635251 TBX20Q9UMR3 447 aa11.47□□□□□ -0.57
PSPC1-207ENST00000635251 CTDP1Q9Y5B0 961 aaPredicted RBP11.47□□□□□ -0.57
PSPC1-207ENST00000635251 ZNF646O15015 1829 aaPredicted RBP11.47□□□□□ -0.57
PSPC1-207ENST00000635251 ZNF536O15090 1300 aa11.47□□□□□ -0.57
PSPC1-207ENST00000635251 ASTN2O75129 1339 aaPredicted RBP11.47□□□□□ -0.57
PSPC1-207ENST00000635251 CNTNAP1P78357 1384 aa11.47□□□□□ -0.57
PSPC1-207ENST00000635251 C21orf2O43822 256 aa11.47□□□□□ -0.57
PSPC1-207ENST00000635251 LYPLA2O95372 231 aa11.47□□□□□ -0.57
PSPC1-207ENST00000635251 VIMP08670 466 aaKnown RBP11.47□□□□□ -0.57
PSPC1-207ENST00000635251 CNGA1P29973 690 aa11.47□□□□□ -0.57
PSPC1-207ENST00000635251 MAPK4P31152 587 aa11.47□□□□□ -0.57
PSPC1-207ENST00000635251 KRT17Q04695 432 aa11.47□□□□□ -0.57
PSPC1-207ENST00000635251 SPP2Q13103 211 aa11.47□□□□□ -0.57
PSPC1-207ENST00000635251 DMP1Q13316 513 aaPredicted RBP11.47□□□□□ -0.57
PSPC1-207ENST00000635251 MKRN4PQ13434 485 aaPredicted RBP11.47□□□□□ -0.57
PSPC1-207ENST00000635251 SPRED3Q2MJR0 410 aa11.47□□□□□ -0.57
PSPC1-207ENST00000635251 CCDC38Q502W7 563 aa11.47□□□□□ -0.57
PSPC1-207ENST00000635251 SWT1Q5T5J6 900 aaKnown RBP11.47□□□□□ -0.57
PSPC1-207ENST00000635251 ACAD10Q6JQN1 1059 aa11.47□□□□□ -0.57
PSPC1-207ENST00000635251 C4orf19Q8IY42 314 aa11.47□□□□□ -0.57
PSPC1-207ENST00000635251 HELQQ8TDG4 1101 aa11.47□□□□□ -0.57
PSPC1-207ENST00000635251 PARD3BQ8TEW8 1205 aa11.47□□□□□ -0.57
PSPC1-207ENST00000635251 ATXN2LQ8WWM7 1075 aaKnown RBP11.47□□□□□ -0.57
PSPC1-207ENST00000635251 CLEC4DQ8WXI8 215 aa11.47□□□□□ -0.57
PSPC1-207ENST00000635251 DHX38Q92620 1227 aaKnown RBP11.47□□□□□ -0.57
PSPC1-207ENST00000635251 P3H4Q92791 437 aa11.47□□□□□ -0.57
PSPC1-207ENST00000635251 HVCN1Q96D96 273 aa11.47□□□□□ -0.57
PSPC1-207ENST00000635251 TAAR1Q96RJ0 339 aa11.47□□□□□ -0.57
PSPC1-207ENST00000635251 DEFB129Q9H1M3 183 aa11.47□□□□□ -0.57
PSPC1-207ENST00000635251 KMT5AQ9NQR1 393 aa11.47□□□□□ -0.57
PSPC1-207ENST00000635251 RAB20Q9NX57 234 aa11.47□□□□□ -0.57
PSPC1-207ENST00000635251 ASIC3Q9UHC3 531 aa11.47□□□□□ -0.57
PSPC1-207ENST00000635251 ANAPC7Q9UJX3 599 aa11.47□□□□□ -0.57
PSPC1-207ENST00000635251 ZBTB12Q9Y330 459 aaPredicted RBP11.47□□□□□ -0.57
PSPC1-207ENST00000635251 DENND3A2RUS2 1198 aa11.46□□□□□ -0.57
PSPC1-207ENST00000635251 ADSSP30520 456 aa11.46□□□□□ -0.57
PSPC1-207ENST00000635251 SCTRP47872 440 aa11.46□□□□□ -0.57
PSPC1-207ENST00000635251 IFNAR2P48551 515 aa11.46□□□□□ -0.57
PSPC1-207ENST00000635251 SIX1Q15475 284 aaPredicted RBP11.46□□□□□ -0.57
PSPC1-207ENST00000635251 SPDYE2Q495Y8 402 aa11.46□□□□□ -0.57
PSPC1-207ENST00000635251 USP37Q86T82 979 aa11.46□□□□□ -0.57
PSPC1-207ENST00000635251 TAS1R2Q8TE23 839 aa11.46□□□□□ -0.57
PSPC1-207ENST00000635251 DYDC1Q8WWB3 177 aa11.46□□□□□ -0.57
PSPC1-207ENST00000635251 POMGNT1Q8WZA1 660 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms