RNA–Protein interactions for RNA: ENST00000634925.1

SMARCA2-230, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 1,582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-230ENST00000634925 ZSCAN20P17040 1043 aaPredicted RBP12.14□□□□□ -0.47
SMARCA2-230ENST00000634925 COPB1P53618 953 aaKnown RBP12.14□□□□□ -0.47
SMARCA2-230ENST00000634925 SPAG1Q07617 926 aa12.14□□□□□ -0.47
SMARCA2-230ENST00000634925 CYP24A1Q07973 514 aa12.14□□□□□ -0.47
SMARCA2-230ENST00000634925 DCAF4L1Q3SXM0 396 aa12.14□□□□□ -0.47
SMARCA2-230ENST00000634925 PLEKHG4Q58EX7 1191 aa12.14□□□□□ -0.47
SMARCA2-230ENST00000634925 RTN4RL1Q86UN2 441 aaPredicted RBP12.14□□□□□ -0.47
SMARCA2-230ENST00000634925 TRIM59Q8IWR1 403 aa12.14□□□□□ -0.47
SMARCA2-230ENST00000634925 SMG8Q8ND04 991 aaKnown RBP12.14□□□□□ -0.47
SMARCA2-230ENST00000634925 DBF4BQ8NFT6 615 aa12.14□□□□□ -0.47
SMARCA2-230ENST00000634925 VWCEQ96DN2 955 aa12.14□□□□□ -0.47
SMARCA2-230ENST00000634925 CCDC51Q96ER9 411 aa12.14□□□□□ -0.47
SMARCA2-230ENST00000634925 NAP1L5Q96NT1 182 aaPredicted RBP12.14□□□□□ -0.47
SMARCA2-230ENST00000634925 TUBGCP2Q9BSJ2 902 aa12.14□□□□□ -0.47
SMARCA2-230ENST00000634925 VPS16Q9H269 839 aa12.14□□□□□ -0.47
SMARCA2-230ENST00000634925 KIAA1586Q9HCI6 787 aa12.14□□□□□ -0.47
SMARCA2-230ENST00000634925 CPSF3Q9UKF6 684 aaKnown RBP12.14□□□□□ -0.47
SMARCA2-230ENST00000634925 SERPINC1P01008 464 aa12.13□□□□□ -0.47
SMARCA2-230ENST00000634925 CXCL10P02778 98 aa12.13□□□□□ -0.47
SMARCA2-230ENST00000634925 MRE11P49959 708 aa12.13□□□□□ -0.47
SMARCA2-230ENST00000634925 DLG4P78352 724 aa12.13□□□□□ -0.47
SMARCA2-230ENST00000634925 BFSP1Q12934 665 aa12.13□□□□□ -0.47
SMARCA2-230ENST00000634925 ENOX2Q16206 610 aaKnown RBP12.13□□□□□ -0.47
SMARCA2-230ENST00000634925 MIIPQ5JXC2 388 aa12.13□□□□□ -0.47
SMARCA2-230ENST00000634925 C1orf220Q5T0J3 134 aa12.13□□□□□ -0.47
SMARCA2-230ENST00000634925 SARM1Q6SZW1 724 aa12.13□□□□□ -0.47
SMARCA2-230ENST00000634925 DEFB128Q7Z7B8 93 aa12.13□□□□□ -0.47
SMARCA2-230ENST00000634925 LINC01599Q8WXQ3 324 aa12.13□□□□□ -0.47
SMARCA2-230ENST00000634925 ADAM2Q99965 735 aa12.13□□□□□ -0.47
SMARCA2-230ENST00000634925 TRIM6Q9C030 488 aaPredicted RBP12.13□□□□□ -0.47
SMARCA2-230ENST00000634925 RNF39Q9H2S5 420 aa12.13□□□□□ -0.47
SMARCA2-230ENST00000634925 NXF3Q9H4D5 531 aaKnown RBP12.13□□□□□ -0.47
SMARCA2-230ENST00000634925 METTL14Q9HCE5 456 aaKnown RBP12.13□□□□□ -0.47
SMARCA2-230ENST00000634925 FAM105AQ9NUU6 356 aa12.13□□□□□ -0.47
SMARCA2-230ENST00000634925 SNTG2Q9NY99 539 aa12.13□□□□□ -0.47
SMARCA2-230ENST00000634925 RBAKQ9NYW8 714 aaPredicted RBP12.13□□□□□ -0.47
SMARCA2-230ENST00000634925 IFNKQ9P0W0 207 aa12.13□□□□□ -0.47
SMARCA2-230ENST00000634925 TDRD15B5MCY1 1934 aaKnown RBP12.13□□□□□ -0.47
SMARCA2-230ENST00000634925 LTBP2Q14767 1821 aa12.13□□□□□ -0.47
SMARCA2-230ENST00000634925 CEP290O15078 2479 aa12.13□□□□□ -0.47
SMARCA2-230ENST00000634925 TULP1O00294 542 aaPredicted RBP12.13□□□□□ -0.47
SMARCA2-230ENST00000634925 CLTAP09496 248 aa12.13□□□□□ -0.47
SMARCA2-230ENST00000634925 TRIM49P0CI25 452 aa12.13□□□□□ -0.47
SMARCA2-230ENST00000634925 TRIM49CP0CI26 452 aa12.13□□□□□ -0.47
SMARCA2-230ENST00000634925 CXCL8P10145 99 aa12.13□□□□□ -0.47
SMARCA2-230ENST00000634925 RAG1P15918 1043 aa12.13□□□□□ -0.47
SMARCA2-230ENST00000634925 GRM5P41594 1212 aa12.13□□□□□ -0.47
SMARCA2-230ENST00000634925 VAMP7P51809 220 aa12.13□□□□□ -0.47
SMARCA2-230ENST00000634925 UBASH3AP57075 661 aa12.13□□□□□ -0.47
SMARCA2-230ENST00000634925 MCCD1P59942 119 aaPredicted RBP12.13□□□□□ -0.47
SMARCA2-230ENST00000634925 MAN2A1Q16706 1144 aa12.13□□□□□ -0.47
SMARCA2-230ENST00000634925 PTPN21Q16825 1174 aa12.13□□□□□ -0.47
SMARCA2-230ENST00000634925 DCAF17Q5H9S7 520 aaPredicted RBP12.13□□□□□ -0.47
SMARCA2-230ENST00000634925 TCERG1LQ5VWI1 586 aa12.13□□□□□ -0.47
SMARCA2-230ENST00000634925 INTS8Q75QN2 995 aaKnown RBP12.13□□□□□ -0.47
SMARCA2-230ENST00000634925 APBB1IPQ7Z5R6 666 aaPredicted RBP12.13□□□□□ -0.47
SMARCA2-230ENST00000634925 BRSK2Q8IWQ3 736 aa12.13□□□□□ -0.47
SMARCA2-230ENST00000634925 ANKRD20A12PQ8NF67 263 aa12.13□□□□□ -0.47
SMARCA2-230ENST00000634925 PARD3BQ8TEW8 1205 aa12.13□□□□□ -0.47
SMARCA2-230ENST00000634925 SLC35C1Q96A29 364 aa12.13□□□□□ -0.47
SMARCA2-230ENST00000634925 CCDC127Q96BQ5 260 aa12.13□□□□□ -0.47
SMARCA2-230ENST00000634925 FAM84AQ96KN4 292 aa12.13□□□□□ -0.47
SMARCA2-230ENST00000634925 POP1Q99575 1024 aaKnown RBP12.13□□□□□ -0.47
SMARCA2-230ENST00000634925 APOL6Q9BWW8 343 aa12.13□□□□□ -0.47
SMARCA2-230ENST00000634925 TRIM5Q9C035 493 aa12.13□□□□□ -0.47
SMARCA2-230ENST00000634925 XPO4Q9C0E2 1151 aaKnown RBP12.13□□□□□ -0.47
SMARCA2-230ENST00000634925 CXCL16Q9H2A7 254 aa12.13□□□□□ -0.47
SMARCA2-230ENST00000634925 PDE11AQ9HCR9 933 aa12.13□□□□□ -0.47
SMARCA2-230ENST00000634925 INTS13Q9NVM9 706 aa12.13□□□□□ -0.47
SMARCA2-230ENST00000634925 IPPQ9Y573 584 aa12.13□□□□□ -0.47
SMARCA2-230ENST00000634925 PCDHB2Q9Y5E7 798 aa12.13□□□□□ -0.47
SMARCA2-230ENST00000634925 A0A1B0GTH6 734 aa12.12□□□□□ -0.47
SMARCA2-230ENST00000634925 LRRIQ3A6PVS8 624 aaPredicted RBP12.12□□□□□ -0.47
SMARCA2-230ENST00000634925 MEIS3P2A8K0S8 358 aa12.12□□□□□ -0.47
SMARCA2-230ENST00000634925 TEX33O43247 280 aa12.12□□□□□ -0.47
SMARCA2-230ENST00000634925 PARNO95453 639 aaKnown RBP12.12□□□□□ -0.47
SMARCA2-230ENST00000634925 KRT13P13646 458 aa12.12□□□□□ -0.47
SMARCA2-230ENST00000634925 AKAP5P24588 427 aa12.12□□□□□ -0.47
SMARCA2-230ENST00000634925 KCNH2Q12809 1159 aa12.12□□□□□ -0.47
SMARCA2-230ENST00000634925 PSMD6Q15008 389 aa12.12□□□□□ -0.47
SMARCA2-230ENST00000634925 SLC10A6Q3KNW5 377 aa12.12□□□□□ -0.47
SMARCA2-230ENST00000634925 VWA3BQ502W6 1294 aa12.12□□□□□ -0.47
SMARCA2-230ENST00000634925 LMBRD2Q68DH5 695 aaPredicted RBP12.12□□□□□ -0.47
SMARCA2-230ENST00000634925 C7orf61Q8IZ16 206 aa12.12□□□□□ -0.47
SMARCA2-230ENST00000634925 TNS4Q8IZW8 715 aa12.12□□□□□ -0.47
SMARCA2-230ENST00000634925 SEPT8Q92599 483 aa12.12□□□□□ -0.47
SMARCA2-230ENST00000634925 FAM212AQ96EL1 285 aa12.12□□□□□ -0.47
SMARCA2-230ENST00000634925 ACAP3Q96P50 834 aa12.12□□□□□ -0.47
SMARCA2-230ENST00000634925 TRAIPQ9BWF2 469 aa12.12□□□□□ -0.47
SMARCA2-230ENST00000634925 RPF1Q9H9Y2 349 aaKnown RBP12.12□□□□□ -0.47
SMARCA2-230ENST00000634925 RTN4Q9NQC3 1192 aaKnown RBP12.12□□□□□ -0.47
SMARCA2-230ENST00000634925 TOPORSQ9NS56 1045 aaPredicted RBP12.12□□□□□ -0.47
SMARCA2-230ENST00000634925 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.12□□□□□ -0.47
SMARCA2-230ENST00000634925 PTPRJQ12913 1337 aa12.11□□□□□ -0.47
SMARCA2-230ENST00000634925 LACTBL1A8MY62 500 aa12.11□□□□□ -0.47
SMARCA2-230ENST00000634925 PES1O00541 588 aaKnown RBP12.11□□□□□ -0.47
SMARCA2-230ENST00000634925 RECQL4O94761 1208 aa12.11□□□□□ -0.47
SMARCA2-230ENST00000634925 DLATP10515 647 aaKnown RBP12.11□□□□□ -0.47
SMARCA2-230ENST00000634925 CSF2RAP15509 400 aa12.11□□□□□ -0.47
SMARCA2-230ENST00000634925 ATF7P17544 494 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms