RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 SLC5A3P53794 718 aa4.03□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 SP140Q13342 867 aa4.03□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 TRIM25Q14258 630 aaKnown RBP4.03□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.03□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 TIGD2Q4W5G0 525 aa4.03□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 FAM47AQ5JRC9 791 aa4.03□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 LCE1AQ5T7P2 110 aa4.03□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 SDE2Q6IQ49 451 aa4.03□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 BTNL9Q6UXG8 535 aa4.03□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 GDF7Q7Z4P5 450 aa4.03□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 VRK3Q8IV63 474 aa4.03□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 DRC7Q8IY82 874 aa4.03□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 AFAP1L2Q8N4X5 818 aa4.03□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 CLRN3Q8NCR9 226 aa4.03□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 FATE1Q969F0 183 aa4.03□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 COQ10AQ96MF6 247 aa4.03□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 LSM14BQ9BX40 385 aaKnown RBP4.03□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 ANO3Q9BYT9 981 aa4.03□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 SORCS3Q9UPU3 1222 aa4.03□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 TBKBP1A7MCY6 615 aa4.02□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 NEMP1O14524 444 aa4.02□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 B3GALT2O43825 422 aa4.02□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 ITGA10O75578 1167 aa4.02□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 ENDOD1O94919 500 aa4.02□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 SCAF4O95104 1147 aaKnown RBP4.02□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 HK1P19367 917 aa4.02□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 AVPR1BP47901 424 aa4.02□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 LGALS4P56470 323 aa4.02□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 BMT2Q1RMZ1 405 aa4.02□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 CT47A1Q5JQC4 288 aaPredicted RBP4.02□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 RNF219Q5W0B1 726 aaPredicted RBP4.02□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 ZNF572Q7Z3I7 529 aaPredicted RBP4.02□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 HDGFL2Q7Z4V5 671 aaPredicted RBP4.02□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 SPATS2Q86XZ4 545 aaKnown RBP4.02□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 ARHGEF19Q8IW93 802 aa4.02□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 GPR156Q8NFN8 814 aa4.02□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 OR7D4Q8NG98 312 aa4.02□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 CPT1CQ8TCG5 803 aa4.02□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 PROKR1Q8TCW9 393 aa4.02□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 CASKIN2Q8WXE0 1202 aa4.02□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 SLC9A6Q92581 669 aa4.02□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 TOR3AQ9H497 397 aa4.02□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 GREM2Q9H772 168 aa4.02□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 CHST2Q9Y4C5 530 aa4.02□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 FAM171A2A8MVW0 826 aa4.01□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 FAM20BO75063 409 aa4.01□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 CLEC2LP0C7M8 214 aa4.01□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 IL2RBP14784 551 aa4.01□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 ZSCAN20P17040 1043 aaPredicted RBP4.01□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 ECHS1P30084 290 aa4.01□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 KRTAP10-6P60371 365 aaPredicted RBP4.01□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 PDCD1Q15116 288 aa4.01□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 MUM1Q2TAK8 710 aa4.01□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 FAM214AQ32MH5 1076 aa4.01□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 EFCAB12Q6NXP0 572 aa4.01□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 LILRA3Q8N6C8 439 aaPredicted RBP4.01□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 OR10H5Q8NGA6 315 aa4.01□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 LMBR1Q8WVP7 490 aa4.01□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 PGBD4Q96DM1 585 aa4.01□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 CYFIP2Q96F07 1278 aa4.01□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 CPEB1Q9BZB8 566 aaKnown RBP4.01□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 REXO4Q9GZR2 422 aaKnown RBP4.01□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 TOPORSQ9NS56 1045 aaPredicted RBP4.01□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 MOCS1Q9NZB8 636 aa4.01□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 SCOCQ9UIL1 159 aa4.01□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 ZBTB21Q9ULJ3 1066 aa4.01□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 MASP1P48740 699 aa4□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 CLRN1P58418 232 aa4□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 STRN3Q13033 797 aa4□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 ADRM1Q16186 407 aa4□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 CT83Q5H943 113 aa4□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 MUM1L1Q5H9M0 696 aa4□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 RRP12Q5JTH9 1297 aaKnown RBP4□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 STRIP1Q5VSL9 837 aa4□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 TFAP2CQ92754 450 aa4□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 EAF2Q96CJ1 260 aaPredicted RBP4□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 MS4A5Q9H3V2 200 aa4□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 IFT122Q9HBG6 1241 aa4□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 RBM12Q9NTZ6 932 aaKnown RBP4□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 DKK2Q9UBU2 259 aa4□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 MARCH11A6NNE9 402 aa3.99□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 AHRRA9YTQ3 701 aa3.99□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 GPR39O43194 453 aa3.99□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 EYA4O95677 639 aa3.99□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 LPLP06858 475 aa3.99□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 NR4A1P22736 598 aa3.99□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 APOBEC3AP31941 199 aaPredicted RBP3.99□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 MALLQ13021 153 aa3.99□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 ATP2B3Q16720 1220 aa3.99□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 BEAN1Q3B7T3 259 aa3.99□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 ABHD17BQ5VST6 288 aa3.99□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 ABHD15Q6UXT9 468 aa3.99□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 MICALCLQ6ZW33 695 aa3.99□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 KCNK18Q7Z418 384 aa3.99□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 RIN2Q8WYP3 895 aaPredicted RBP3.99□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 FUBP1Q96AE4 644 aaKnown RBP3.99□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 ACE2Q9BYF1 805 aaPredicted RBP3.99□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 SYNPO2LQ9H987 977 aa3.99□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 CYP4F11Q9HBI6 524 aa3.99□□□□□ -1.77
NPHP3-ACAD11-202ENST00000632629 SPON1Q9HCB6 807 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms