RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 PLXNA4Q9HCM2 1894 aa20.42■□□□□ 0.86
PNKP-224ENST00000631020 SCP2P22307 547 aa20.42■□□□□ 0.86
PNKP-224ENST00000631020 KCNA5P22460 613 aa20.42■□□□□ 0.86
PNKP-224ENST00000631020 STRN3Q13033 797 aa20.42■□□□□ 0.86
PNKP-224ENST00000631020 CAMK1Q14012 370 aa20.42■□□□□ 0.86
PNKP-224ENST00000631020 MORC3Q14149 939 aa20.42■□□□□ 0.86
PNKP-224ENST00000631020 L1TD1Q5T7N2 865 aaKnown RBP20.42■□□□□ 0.86
PNKP-224ENST00000631020 CAVIN1Q6NZI2 390 aaKnown RBP20.42■□□□□ 0.86
PNKP-224ENST00000631020 RBM43Q6ZSC3 357 aaKnown RBP20.42■□□□□ 0.86
PNKP-224ENST00000631020 CDR2LQ86X02 465 aaPredicted RBP20.42■□□□□ 0.86
PNKP-224ENST00000631020 ECHDC2Q86YB7 292 aa20.42■□□□□ 0.86
PNKP-224ENST00000631020 MAP4K3Q8IVH8 894 aa20.42■□□□□ 0.86
PNKP-224ENST00000631020 SMYD4Q8IYR2 804 aaPredicted RBP20.42■□□□□ 0.86
PNKP-224ENST00000631020 PPP2R3CQ969Q6 453 aa20.42■□□□□ 0.86
PNKP-224ENST00000631020 ALG13Q9NP73 1137 aaKnown RBP20.42■□□□□ 0.86
PNKP-224ENST00000631020 RMND1Q9NWS8 449 aa20.42■□□□□ 0.86
PNKP-224ENST00000631020 PIN4Q9Y237 131 aaKnown RBP20.42■□□□□ 0.86
PNKP-224ENST00000631020 CNTNAP2Q9UHC6 1331 aa20.41■□□□□ 0.86
PNKP-224ENST00000631020 A0A1B0GUA9 196 aa20.41■□□□□ 0.86
PNKP-224ENST00000631020 ALCAMQ13740 583 aa20.41■□□□□ 0.86
PNKP-224ENST00000631020 CTC1Q2NKJ3 1217 aa20.41■□□□□ 0.86
PNKP-224ENST00000631020 CCDC183Q5T5S1 534 aa20.41■□□□□ 0.86
PNKP-224ENST00000631020 ZNF658Q5TYW1 1059 aaPredicted RBP20.41■□□□□ 0.86
PNKP-224ENST00000631020 EEF1DP3Q658K8 133 aa20.41■□□□□ 0.86
PNKP-224ENST00000631020 HVCN1Q96D96 273 aa20.41■□□□□ 0.86
PNKP-224ENST00000631020 ACO2Q99798 780 aaKnown RBP20.41■□□□□ 0.86
PNKP-224ENST00000631020 MRPL4Q9BYD3 311 aaKnown RBP20.41■□□□□ 0.86
PNKP-224ENST00000631020 EIF3DO15371 548 aaKnown RBP eCLIP20.4■□□□□ 0.86
PNKP-224ENST00000631020 FGFR1P11362 822 aa20.4■□□□□ 0.86
PNKP-224ENST00000631020 LAG3P18627 525 aa20.4■□□□□ 0.86
PNKP-224ENST00000631020 AXLP30530 894 aa20.4■□□□□ 0.86
PNKP-224ENST00000631020 UBXN11Q5T124 520 aa20.4■□□□□ 0.86
PNKP-224ENST00000631020 SLC39A4Q6P5W5 647 aa20.4■□□□□ 0.86
PNKP-224ENST00000631020 ZNF598Q86UK7 904 aaKnown RBP20.4■□□□□ 0.86
PNKP-224ENST00000631020 ZBTB45Q96K62 511 aaPredicted RBP20.4■□□□□ 0.86
PNKP-224ENST00000631020 CASD1Q96PB1 797 aa20.4■□□□□ 0.86
PNKP-224ENST00000631020 ACCSQ96QU6 501 aa20.4■□□□□ 0.86
PNKP-224ENST00000631020 PDZD7Q9H5P4 517 aa20.4■□□□□ 0.86
PNKP-224ENST00000631020 PTPRHQ9HD43 1115 aa20.4■□□□□ 0.86
PNKP-224ENST00000631020 RNF19AQ9NV58 838 aa20.4■□□□□ 0.86
PNKP-224ENST00000631020 TYW1Q9NV66 732 aaKnown RBP20.4■□□□□ 0.86
PNKP-224ENST00000631020 MAPK8IP1Q9UQF2 711 aa20.4■□□□□ 0.86
PNKP-224ENST00000631020 TISP43B9A030 160 aa20.39■□□□□ 0.85
PNKP-224ENST00000631020 ANKRD63C9JTQ0 380 aa20.39■□□□□ 0.85
PNKP-224ENST00000631020 ABLIM1O14639 778 aa20.39■□□□□ 0.85
PNKP-224ENST00000631020 PIGRP01833 764 aa20.39■□□□□ 0.85
PNKP-224ENST00000631020 SKIP12755 728 aa20.39■□□□□ 0.85
PNKP-224ENST00000631020 IBSPP21815 317 aaPredicted RBP20.39■□□□□ 0.85
PNKP-224ENST00000631020 ABCD1P33897 745 aa20.39■□□□□ 0.85
PNKP-224ENST00000631020 BMT2Q1RMZ1 405 aa20.39■□□□□ 0.85
PNKP-224ENST00000631020 SKOR2Q2VWA4 1001 aaPredicted RBP20.39■□□□□ 0.85
PNKP-224ENST00000631020 ATF7IP2Q5U623 682 aa20.39■□□□□ 0.85
PNKP-224ENST00000631020 NELFCDQ8IXH7 590 aa20.39■□□□□ 0.85
PNKP-224ENST00000631020 ABI1Q8IZP0 508 aa20.39■□□□□ 0.85
PNKP-224ENST00000631020 LRRC43Q8N309 656 aa20.39■□□□□ 0.85
PNKP-224ENST00000631020 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.39■□□□□ 0.85
PNKP-224ENST00000631020 POF1BQ8WVV4 589 aa20.39■□□□□ 0.85
PNKP-224ENST00000631020 CWH43Q9H720 699 aa20.39■□□□□ 0.85
PNKP-224ENST00000631020 TNFSF13BQ9Y275 285 aa20.39■□□□□ 0.85
PNKP-224ENST00000631020 DNAJB1P25685 340 aa20.38■□□□□ 0.85
PNKP-224ENST00000631020 PRCPP42785 496 aa20.38■□□□□ 0.85
PNKP-224ENST00000631020 NCBP1Q09161 790 aaKnown RBP20.38■□□□□ 0.85
PNKP-224ENST00000631020 SPOUT1Q5T280 376 aaKnown RBP20.38■□□□□ 0.85
PNKP-224ENST00000631020 NOTUMQ6P988 496 aa20.38■□□□□ 0.85
PNKP-224ENST00000631020 ZPBP2Q6X784 338 aa20.38■□□□□ 0.85
PNKP-224ENST00000631020 STXBP4Q6ZWJ1 553 aa20.38■□□□□ 0.85
PNKP-224ENST00000631020 COLGALT1Q8NBJ5 622 aa20.38■□□□□ 0.85
PNKP-224ENST00000631020 NECAB3Q96P71 396 aaPredicted RBP20.38■□□□□ 0.85
PNKP-224ENST00000631020 EIF2AQ9BY44 585 aaKnown RBP20.38■□□□□ 0.85
PNKP-224ENST00000631020 HAPLN2Q9GZV7 340 aa20.38■□□□□ 0.85
PNKP-224ENST00000631020 FAM50BQ9Y247 325 aa20.38■□□□□ 0.85
PNKP-224ENST00000631020 LZTS1Q9Y250 596 aa20.38■□□□□ 0.85
PNKP-224ENST00000631020 ZMYM2Q9UBW7 1377 aa20.38■□□□□ 0.85
PNKP-224ENST00000631020 CD44P16070 742 aaKnown RBP20.37■□□□□ 0.85
PNKP-224ENST00000631020 ATF7P17544 494 aaPredicted RBP20.37■□□□□ 0.85
PNKP-224ENST00000631020 PROZP22891 400 aa20.37■□□□□ 0.85
PNKP-224ENST00000631020 RAB27AP51159 221 aa20.37■□□□□ 0.85
PNKP-224ENST00000631020 HYAL1Q12794 435 aa20.37■□□□□ 0.85
PNKP-224ENST00000631020 PDE12Q6L8Q7 609 aaKnown RBP20.37■□□□□ 0.85
PNKP-224ENST00000631020 BICD1Q96G01 975 aa20.37■□□□□ 0.85
PNKP-224ENST00000631020 MRPL9Q9BYD2 267 aaKnown RBP20.37■□□□□ 0.85
PNKP-224ENST00000631020 CLDND1Q9NY35 253 aa20.37■□□□□ 0.85
PNKP-224ENST00000631020 FSD2A1L4K1 749 aa20.37■□□□□ 0.85
PNKP-224ENST00000631020 CARNS1A5YM72 827 aa20.37■□□□□ 0.85
PNKP-224ENST00000631020 GRXCR2A6NFK2 248 aa20.37■□□□□ 0.85
PNKP-224ENST00000631020 HNRNPDLO14979 420 aaKnown RBP20.37■□□□□ 0.85
PNKP-224ENST00000631020 TGFB1I1O43294 461 aa20.37■□□□□ 0.85
PNKP-224ENST00000631020 ZNF623O75123 536 aa20.37■□□□□ 0.85
PNKP-224ENST00000631020 TOM1L1O75674 476 aa20.37■□□□□ 0.85
PNKP-224ENST00000631020 FGF18O76093 207 aa20.37■□□□□ 0.85
PNKP-224ENST00000631020 PPM1AP35813 382 aa20.37■□□□□ 0.85
PNKP-224ENST00000631020 LIG4P49917 911 aa20.37■□□□□ 0.85
PNKP-224ENST00000631020 PLCB3Q01970 1234 aa20.37■□□□□ 0.85
PNKP-224ENST00000631020 KNOP1Q1ED39 458 aaKnown RBP20.37■□□□□ 0.85
PNKP-224ENST00000631020 TMEM132AQ24JP5 1023 aa20.37■□□□□ 0.85
PNKP-224ENST00000631020 CLLU1OSQ5K130 101 aa20.37■□□□□ 0.85
PNKP-224ENST00000631020 TWF2Q6IBS0 349 aaKnown RBP20.37■□□□□ 0.85
PNKP-224ENST00000631020 PTCRAQ6ISU1 281 aaPredicted RBP20.37■□□□□ 0.85
PNKP-224ENST00000631020 SYCP3Q8IZU3 236 aa20.37■□□□□ 0.85
PNKP-224ENST00000631020 GUF1Q8N442 669 aaKnown RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms