RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 JPH1Q9HDC5 661 aaPredicted RBP5.41□□□□□ -1.54
LINC00550-201ENST00000629293 MAP3K20Q9NYL2 800 aaKnown RBP5.41□□□□□ -1.54
LINC00550-201ENST00000629293 USP15Q9Y4E8 981 aaPredicted RBP5.41□□□□□ -1.54
LINC00550-201ENST00000629293 COL4A4P53420 1690 aaPredicted RBP5.4□□□□□ -1.54
LINC00550-201ENST00000629293 GSTTP1A0A1W2PQM5 241 aa5.4□□□□□ -1.54
LINC00550-201ENST00000629293 H0Y858 1186 aa5.4□□□□□ -1.54
LINC00550-201ENST00000629293 MEIS2O14770 477 aa5.4□□□□□ -1.54
LINC00550-201ENST00000629293 NCK2O43639 380 aa5.4□□□□□ -1.54
LINC00550-201ENST00000629293 RPS6KA5O75582 802 aa5.4□□□□□ -1.54
LINC00550-201ENST00000629293 CTDNEP1O95476 244 aa5.4□□□□□ -1.54
LINC00550-201ENST00000629293 WEE2P0C1S8 567 aa5.4□□□□□ -1.54
LINC00550-201ENST00000629293 EVCP57679 992 aa5.4□□□□□ -1.54
LINC00550-201ENST00000629293 SMAD4Q13485 552 aaKnown RBP5.4□□□□□ -1.54
LINC00550-201ENST00000629293 FAM102BQ5T8I3 360 aa5.4□□□□□ -1.54
LINC00550-201ENST00000629293 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.4□□□□□ -1.54
LINC00550-201ENST00000629293 NSUN7Q8NE18 718 aaKnown RBP5.4□□□□□ -1.54
LINC00550-201ENST00000629293 LEO1Q8WVC0 666 aaPredicted RBP5.4□□□□□ -1.54
LINC00550-201ENST00000629293 BRF1Q92994 677 aa5.4□□□□□ -1.54
LINC00550-201ENST00000629293 PLD4Q96BZ4 506 aa5.4□□□□□ -1.54
LINC00550-201ENST00000629293 ADAM2Q99965 735 aa5.4□□□□□ -1.54
LINC00550-201ENST00000629293 SCAND2PQ9GZW5 306 aaPredicted RBP5.4□□□□□ -1.54
LINC00550-201ENST00000629293 ENTPD7Q9NQZ7 604 aa5.4□□□□□ -1.54
LINC00550-201ENST00000629293 TLR9Q9NR96 1032 aa5.4□□□□□ -1.54
LINC00550-201ENST00000629293 SIRPGQ9P1W8 387 aa5.4□□□□□ -1.54
LINC00550-201ENST00000629293 PRKAG3Q9UGI9 489 aa5.4□□□□□ -1.54
LINC00550-201ENST00000629293 RWDD3Q9Y3V2 267 aa5.4□□□□□ -1.54
LINC00550-201ENST00000629293 PCDHB7Q9Y5E2 793 aa5.4□□□□□ -1.54
LINC00550-201ENST00000629293 DOCK5Q9H7D0 1870 aa5.4□□□□□ -1.55
LINC00550-201ENST00000629293 TMEM221A6NGB7 291 aa5.4□□□□□ -1.55
LINC00550-201ENST00000629293 M0R296 226 aa5.4□□□□□ -1.55
LINC00550-201ENST00000629293 DGKIO75912 1065 aa5.4□□□□□ -1.55
LINC00550-201ENST00000629293 TPM2P07951 284 aa5.4□□□□□ -1.55
LINC00550-201ENST00000629293 STAG3L1P0CL83 205 aa5.4□□□□□ -1.55
LINC00550-201ENST00000629293 FGFR1P11362 822 aa5.4□□□□□ -1.55
LINC00550-201ENST00000629293 KCNA2P16389 499 aa5.4□□□□□ -1.55
LINC00550-201ENST00000629293 LIG1P18858 919 aa5.4□□□□□ -1.55
LINC00550-201ENST00000629293 ICAM3P32942 547 aa5.4□□□□□ -1.55
LINC00550-201ENST00000629293 STAT5BP51692 787 aa5.4□□□□□ -1.55
LINC00550-201ENST00000629293 NAPAP54920 295 aa5.4□□□□□ -1.55
LINC00550-201ENST00000629293 ANTXR2P58335 489 aa5.4□□□□□ -1.55
LINC00550-201ENST00000629293 AMPD3Q01432 767 aa5.4□□□□□ -1.55
LINC00550-201ENST00000629293 KRT76Q01546 638 aa5.4□□□□□ -1.55
LINC00550-201ENST00000629293 STK3Q13188 491 aa5.4□□□□□ -1.55
LINC00550-201ENST00000629293 CAMK1Q14012 370 aa5.4□□□□□ -1.55
LINC00550-201ENST00000629293 FAM173BQ6P4H8 233 aa5.4□□□□□ -1.55
LINC00550-201ENST00000629293 RTN4RL1Q86UN2 441 aaPredicted RBP5.4□□□□□ -1.55
LINC00550-201ENST00000629293 FERMT3Q86UX7 667 aa5.4□□□□□ -1.55
LINC00550-201ENST00000629293 SRBD1Q8N5C6 995 aaKnown RBP5.4□□□□□ -1.55
LINC00550-201ENST00000629293 GIMAP8Q8ND71 665 aaPredicted RBP5.4□□□□□ -1.55
LINC00550-201ENST00000629293 SPPL3Q8TCT6 385 aa5.4□□□□□ -1.55
LINC00550-201ENST00000629293 LINC01599Q8WXQ3 324 aa5.4□□□□□ -1.55
LINC00550-201ENST00000629293 CDHR1Q96JP9 859 aa5.4□□□□□ -1.55
LINC00550-201ENST00000629293 SENP7Q9BQF6 1050 aa5.4□□□□□ -1.55
LINC00550-201ENST00000629293 SDF4Q9BRK5 362 aa5.4□□□□□ -1.55
LINC00550-201ENST00000629293 KCNH7Q9NS40 1196 aa5.4□□□□□ -1.55
LINC00550-201ENST00000629293 SLC9A2Q9UBY0 812 aa5.4□□□□□ -1.55
LINC00550-201ENST00000629293 USP25Q9UHP3 1055 aa5.4□□□□□ -1.55
LINC00550-201ENST00000629293 PCDHA6Q9UN73 950 aa5.4□□□□□ -1.55
LINC00550-201ENST00000629293 PCDHB12Q9Y5F1 795 aa5.4□□□□□ -1.55
LINC00550-201ENST00000629293 PCDHA8Q9Y5H6 950 aa5.4□□□□□ -1.55
LINC00550-201ENST00000629293 SLC12A7Q9Y666 1083 aa5.4□□□□□ -1.55
LINC00550-201ENST00000629293 F5P12259 2224 aa5.39□□□□□ -1.55
LINC00550-201ENST00000629293 ENC1O14682 589 aa5.39□□□□□ -1.55
LINC00550-201ENST00000629293 SPINT1O43278 529 aa5.39□□□□□ -1.55
LINC00550-201ENST00000629293 CAND2O75155 1236 aa5.39□□□□□ -1.55
LINC00550-201ENST00000629293 STAM2O75886 525 aa5.39□□□□□ -1.55
LINC00550-201ENST00000629293 PDGFBP01127 241 aaPredicted RBP5.39□□□□□ -1.55
LINC00550-201ENST00000629293 MYBP10242 640 aa5.39□□□□□ -1.55
LINC00550-201ENST00000629293 ACTR2P61160 394 aa5.39□□□□□ -1.55
LINC00550-201ENST00000629293 TRIM67Q6ZTA4 783 aa5.39□□□□□ -1.55
LINC00550-201ENST00000629293 SLITRK4Q8IW52 837 aa5.39□□□□□ -1.55
LINC00550-201ENST00000629293 RNF217Q8TC41 542 aa5.39□□□□□ -1.55
LINC00550-201ENST00000629293 ATOH1Q92858 354 aaPredicted RBP5.39□□□□□ -1.55
LINC00550-201ENST00000629293 INSM2Q96T92 566 aaPredicted RBP5.39□□□□□ -1.55
LINC00550-201ENST00000629293 OSMRQ99650 979 aa5.39□□□□□ -1.55
LINC00550-201ENST00000629293 EHMT1Q9H9B1 1298 aa5.39□□□□□ -1.55
LINC00550-201ENST00000629293 PCDH12Q9NPG4 1184 aa5.39□□□□□ -1.55
LINC00550-201ENST00000629293 SAMM50Q9Y512 469 aa5.39□□□□□ -1.55
LINC00550-201ENST00000629293 TRPV2Q9Y5S1 764 aa5.39□□□□□ -1.55
LINC00550-201ENST00000629293 AP5Z1O43299 807 aa5.39□□□□□ -1.55
LINC00550-201ENST00000629293 CSDE1O75534 798 aaKnown RBP5.39□□□□□ -1.55
LINC00550-201ENST00000629293 MMP1P03956 469 aa5.39□□□□□ -1.55
LINC00550-201ENST00000629293 VTNP04004 478 aa5.39□□□□□ -1.55
LINC00550-201ENST00000629293 ARP10275 920 aa5.39□□□□□ -1.55
LINC00550-201ENST00000629293 KLRC1P26715 233 aa5.39□□□□□ -1.55
LINC00550-201ENST00000629293 HOXC8P31273 242 aa5.39□□□□□ -1.55
LINC00550-201ENST00000629293 TECP42680 631 aa5.39□□□□□ -1.55
LINC00550-201ENST00000629293 ADAM17P78536 824 aa5.39□□□□□ -1.55
LINC00550-201ENST00000629293 ADAM15Q13444 863 aa5.39□□□□□ -1.55
LINC00550-201ENST00000629293 MARCH8Q5T0T0 291 aa5.39□□□□□ -1.55
LINC00550-201ENST00000629293 JAKMIP3Q5VZ66 844 aa5.39□□□□□ -1.55
LINC00550-201ENST00000629293 SYNE3Q6ZMZ3 975 aa5.39□□□□□ -1.55
LINC00550-201ENST00000629293 ABI1Q8IZP0 508 aa5.39□□□□□ -1.55
LINC00550-201ENST00000629293 CELF4Q9BZC1 486 aaKnown RBP5.39□□□□□ -1.55
LINC00550-201ENST00000629293 ZSCAN16Q9H4T2 348 aaPredicted RBP5.39□□□□□ -1.55
LINC00550-201ENST00000629293 TYW1Q9NV66 732 aaKnown RBP5.39□□□□□ -1.55
LINC00550-201ENST00000629293 DZANK1Q9NVP4 752 aa5.39□□□□□ -1.55
LINC00550-201ENST00000629293 ABI2Q9NYB9 513 aaPredicted RBP5.39□□□□□ -1.55
LINC00550-201ENST00000629293 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.39□□□□□ -1.55
LINC00550-201ENST00000629293 RRN3P2A6NIE6 340 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms