RNA–Protein interactions for RNA: ENST00000627328.2

PTP4A2-220, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5 BASIC

Gene PTP4A2, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-220ENST00000627328 SPATA31D4Q6ZUB0 917 aa4.35□□□□□ -1.71
PTP4A2-220ENST00000627328 GDF7Q7Z4P5 450 aa4.35□□□□□ -1.71
PTP4A2-220ENST00000627328 HDGFL2Q7Z4V5 671 aaPredicted RBP4.35□□□□□ -1.71
PTP4A2-220ENST00000627328 CLRN3Q8NCR9 226 aa4.35□□□□□ -1.71
PTP4A2-220ENST00000627328 ZFP28Q8NHY6 868 aa4.35□□□□□ -1.71
PTP4A2-220ENST00000627328 CHAC2Q8WUX2 184 aa4.35□□□□□ -1.71
PTP4A2-220ENST00000627328 AUTS2Q8WXX7 1259 aa4.35□□□□□ -1.71
PTP4A2-220ENST00000627328 FATE1Q969F0 183 aa4.35□□□□□ -1.71
PTP4A2-220ENST00000627328 EAF2Q96CJ1 260 aaPredicted RBP4.35□□□□□ -1.71
PTP4A2-220ENST00000627328 ORAI2Q96SN7 254 aa4.35□□□□□ -1.71
PTP4A2-220ENST00000627328 PACSIN3Q9UKS6 424 aa4.35□□□□□ -1.71
PTP4A2-220ENST00000627328 CHST2Q9Y4C5 530 aa4.35□□□□□ -1.71
PTP4A2-220ENST00000627328 TMEM200CA6NKL6 621 aa4.34□□□□□ -1.71
PTP4A2-220ENST00000627328 AHRRA9YTQ3 701 aa4.34□□□□□ -1.71
PTP4A2-220ENST00000627328 LPLP06858 475 aa4.34□□□□□ -1.71
PTP4A2-220ENST00000627328 APOBEC3AP31941 199 aaPredicted RBP4.34□□□□□ -1.71
PTP4A2-220ENST00000627328 BLOC1S1P78537 153 aa4.34□□□□□ -1.71
PTP4A2-220ENST00000627328 STRN3Q13033 797 aa4.34□□□□□ -1.71
PTP4A2-220ENST00000627328 FAM47AQ5JRC9 791 aa4.34□□□□□ -1.71
PTP4A2-220ENST00000627328 LILRA3Q8N6C8 439 aaPredicted RBP4.34□□□□□ -1.71
PTP4A2-220ENST00000627328 TOR3AQ9H497 397 aa4.34□□□□□ -1.71
PTP4A2-220ENST00000627328 BCO1Q9HAY6 547 aa4.34□□□□□ -1.71
PTP4A2-220ENST00000627328 SPON1Q9HCB6 807 aa4.34□□□□□ -1.71
PTP4A2-220ENST00000627328 ZMYM3Q14202 1370 aa4.33□□□□□ -1.72
PTP4A2-220ENST00000627328 NUDT3O95989 172 aa4.33□□□□□ -1.72
PTP4A2-220ENST00000627328 ZSCAN20P17040 1043 aaPredicted RBP4.33□□□□□ -1.72
PTP4A2-220ENST00000627328 MXRA7P84157 204 aa4.33□□□□□ -1.72
PTP4A2-220ENST00000627328 NHLH2Q02577 135 aa4.33□□□□□ -1.72
PTP4A2-220ENST00000627328 CT47A1Q5JQC4 288 aaPredicted RBP4.33□□□□□ -1.72
PTP4A2-220ENST00000627328 MBNL2Q5VZF2 373 aaKnown RBP4.33□□□□□ -1.72
PTP4A2-220ENST00000627328 SDE2Q6IQ49 451 aa4.33□□□□□ -1.72
PTP4A2-220ENST00000627328 MICALCLQ6ZW33 695 aa4.33□□□□□ -1.72
PTP4A2-220ENST00000627328 XYLT1Q86Y38 959 aa4.33□□□□□ -1.72
PTP4A2-220ENST00000627328 ARHGEF19Q8IW93 802 aa4.33□□□□□ -1.72
PTP4A2-220ENST00000627328 AFAP1L2Q8N4X5 818 aa4.33□□□□□ -1.72
PTP4A2-220ENST00000627328 GPR156Q8NFN8 814 aa4.33□□□□□ -1.72
PTP4A2-220ENST00000627328 OR10H5Q8NGA6 315 aa4.33□□□□□ -1.72
PTP4A2-220ENST00000627328 LMBR1Q8WVP7 490 aa4.33□□□□□ -1.72
PTP4A2-220ENST00000627328 TFAP2CQ92754 450 aa4.33□□□□□ -1.72
PTP4A2-220ENST00000627328 MLST8Q9BVC4 326 aa4.33□□□□□ -1.72
PTP4A2-220ENST00000627328 PRDM12Q9H4Q4 367 aa4.33□□□□□ -1.72
PTP4A2-220ENST00000627328 AKIP1Q9NQ31 210 aa4.33□□□□□ -1.72
PTP4A2-220ENST00000627328 TRPM5Q9NZQ8 1165 aa4.33□□□□□ -1.72
PTP4A2-220ENST00000627328 FAM30AQ9NZY2 134 aa4.33□□□□□ -1.72
PTP4A2-220ENST00000627328 POGKQ9P215 609 aa4.33□□□□□ -1.72
PTP4A2-220ENST00000627328 DPP7Q9UHL4 492 aa4.33□□□□□ -1.72
PTP4A2-220ENST00000627328 SNRPA1P09661 255 aaKnown RBP4.32□□□□□ -1.72
PTP4A2-220ENST00000627328 AVPR1BP47901 424 aa4.32□□□□□ -1.72
PTP4A2-220ENST00000627328 ID4P47928 161 aa4.32□□□□□ -1.72
PTP4A2-220ENST00000627328 MASP1P48740 699 aa4.32□□□□□ -1.72
PTP4A2-220ENST00000627328 CLRN1P58418 232 aa4.32□□□□□ -1.72
PTP4A2-220ENST00000627328 SP140Q13342 867 aa4.32□□□□□ -1.72
PTP4A2-220ENST00000627328 ADRM1Q16186 407 aa4.32□□□□□ -1.72
PTP4A2-220ENST00000627328 MUM1Q2TAK8 710 aa4.32□□□□□ -1.72
PTP4A2-220ENST00000627328 BEAN1Q3B7T3 259 aa4.32□□□□□ -1.72
PTP4A2-220ENST00000627328 MUM1L1Q5H9M0 696 aa4.32□□□□□ -1.72
PTP4A2-220ENST00000627328 KRT26Q7Z3Y9 468 aa4.32□□□□□ -1.72
PTP4A2-220ENST00000627328 PRIMA1Q86XR5 153 aa4.32□□□□□ -1.72
PTP4A2-220ENST00000627328 OR7D4Q8NG98 312 aa4.32□□□□□ -1.72
PTP4A2-220ENST00000627328 MDM1Q8TC05 714 aa4.32□□□□□ -1.72
PTP4A2-220ENST00000627328 GREM2Q9H772 168 aa4.32□□□□□ -1.72
PTP4A2-220ENST00000627328 CYP4F11Q9HBI6 524 aa4.32□□□□□ -1.72
PTP4A2-220ENST00000627328 RBM12Q9NTZ6 932 aaKnown RBP4.32□□□□□ -1.72
PTP4A2-220ENST00000627328 USP35Q9P2H5 1018 aa4.32□□□□□ -1.72
PTP4A2-220ENST00000627328 ZBTB21Q9ULJ3 1066 aa4.32□□□□□ -1.72
PTP4A2-220ENST00000627328 PRKAB1Q9Y478 270 aa4.32□□□□□ -1.72
PTP4A2-220ENST00000627328 GOLGA8AA7E2F4 631 aa4.31□□□□□ -1.72
PTP4A2-220ENST00000627328 LEFTY2O00292 366 aa4.31□□□□□ -1.72
PTP4A2-220ENST00000627328 AKR1B10O60218 316 aa4.31□□□□□ -1.72
PTP4A2-220ENST00000627328 VIL1P09327 827 aaKnown RBP4.31□□□□□ -1.72
PTP4A2-220ENST00000627328 ECHS1P30084 290 aa4.31□□□□□ -1.72
PTP4A2-220ENST00000627328 SLC5A3P53794 718 aa4.31□□□□□ -1.72
PTP4A2-220ENST00000627328 USP14P54578 494 aa4.31□□□□□ -1.72
PTP4A2-220ENST00000627328 RRP12Q5JTH9 1297 aaKnown RBP4.31□□□□□ -1.72
PTP4A2-220ENST00000627328 PRAMEF14Q5SWL7 426 aa4.31□□□□□ -1.72
PTP4A2-220ENST00000627328 ZNF572Q7Z3I7 529 aaPredicted RBP4.31□□□□□ -1.72
PTP4A2-220ENST00000627328 KCNK18Q7Z418 384 aa4.31□□□□□ -1.72
PTP4A2-220ENST00000627328 STRA8Q7Z7C7 330 aa4.31□□□□□ -1.72
PTP4A2-220ENST00000627328 VRK3Q8IV63 474 aa4.31□□□□□ -1.72
PTP4A2-220ENST00000627328 RIN2Q8WYP3 895 aaPredicted RBP4.31□□□□□ -1.72
PTP4A2-220ENST00000627328 COQ10AQ96MF6 247 aa4.31□□□□□ -1.72
PTP4A2-220ENST00000627328 REXO4Q9GZR2 422 aaKnown RBP4.31□□□□□ -1.72
PTP4A2-220ENST00000627328 SERHL2Q9H4I8 314 aa4.31□□□□□ -1.72
PTP4A2-220ENST00000627328 ZNF768Q9H5H4 540 aaKnown RBP4.31□□□□□ -1.72
PTP4A2-220ENST00000627328 IFT122Q9HBG6 1241 aa4.31□□□□□ -1.72
PTP4A2-220ENST00000627328 MOCS1Q9NZB8 636 aa4.31□□□□□ -1.72
PTP4A2-220ENST00000627328 DKK2Q9UBU2 259 aa4.31□□□□□ -1.72
PTP4A2-220ENST00000627328 SCOCQ9UIL1 159 aa4.31□□□□□ -1.72
PTP4A2-220ENST00000627328 CENPVL1A0A0U1RR11 272 aa4.3□□□□□ -1.72
PTP4A2-220ENST00000627328 GRID2IPA4D2P6 1211 aa4.3□□□□□ -1.72
PTP4A2-220ENST00000627328 TEX33O43247 280 aa4.3□□□□□ -1.72
PTP4A2-220ENST00000627328 NCR1O76036 304 aa4.3□□□□□ -1.72
PTP4A2-220ENST00000627328 EYA4O95677 639 aa4.3□□□□□ -1.72
PTP4A2-220ENST00000627328 LMNAP02545 664 aaKnown RBP4.3□□□□□ -1.72
PTP4A2-220ENST00000627328 IL2RBP14784 551 aa4.3□□□□□ -1.72
PTP4A2-220ENST00000627328 PROZP22891 400 aa4.3□□□□□ -1.72
PTP4A2-220ENST00000627328 ZFP36P26651 326 aaKnown RBP4.3□□□□□ -1.72
PTP4A2-220ENST00000627328 CD38P28907 300 aa4.3□□□□□ -1.72
PTP4A2-220ENST00000627328 PTPN7P35236 360 aa4.3□□□□□ -1.72
PTP4A2-220ENST00000627328 CDK17Q00537 523 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms