RNA–Protein interactions for RNA: ENST00000626422.2

MECP2-215, Transcript of methyl-CpG binding protein 2, human

TSL 5

Gene MECP2, Length 835 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MECP2-215	ENST00000626422	CCNT1	O60563	726 aa	Known RBP	13.9	□□□□□ -0.18
MECP2-215	ENST00000626422	NR1I2	O75469	434 aa		13.9	□□□□□ -0.18
MECP2-215	ENST00000626422	TADA2A	O75478	443 aa		13.9	□□□□□ -0.18
MECP2-215	ENST00000626422	NPTXR	O95502	500 aa		13.9	□□□□□ -0.18
MECP2-215	ENST00000626422	CD72	P21854	359 aa		13.9	□□□□□ -0.18
MECP2-215	ENST00000626422	IGFBP6	P24592	240 aa	Predicted RBP	13.9	□□□□□ -0.18
MECP2-215	ENST00000626422	ARL2	P36404	184 aa		13.9	□□□□□ -0.18
MECP2-215	ENST00000626422	PUM1	Q14671	1186 aa	Known RBP eCLIP	13.9	□□□□□ -0.18
MECP2-215	ENST00000626422	POTEH	Q6S545	545 aa		13.9	□□□□□ -0.18
MECP2-215	ENST00000626422	RUFY3	Q7L099	469 aa		13.9	□□□□□ -0.18
MECP2-215	ENST00000626422	OTUD6A	Q7L8S5	288 aa		13.9	□□□□□ -0.18
MECP2-215	ENST00000626422	NEK8	Q86SG6	692 aa		13.9	□□□□□ -0.18
MECP2-215	ENST00000626422	TPH2	Q8IWU9	490 aa		13.9	□□□□□ -0.18
MECP2-215	ENST00000626422	ITFG1	Q8TB96	612 aa		13.9	□□□□□ -0.18
MECP2-215	ENST00000626422	LNX1	Q8TBB1	728 aa	Predicted RBP	13.9	□□□□□ -0.18
MECP2-215	ENST00000626422	HASPIN	Q8TF76	798 aa		13.9	□□□□□ -0.18
MECP2-215	ENST00000626422	CCDC51	Q96ER9	411 aa		13.9	□□□□□ -0.18
MECP2-215	ENST00000626422	DDX23	Q9BUQ8	820 aa	Known RBP	13.9	□□□□□ -0.18
MECP2-215	ENST00000626422	PHF20	Q9BVI0	1012 aa		13.9	□□□□□ -0.18
MECP2-215	ENST00000626422	FBXW11	Q9UKB1	542 aa		13.9	□□□□□ -0.18
MECP2-215	ENST00000626422	TRIP11	Q15643	1979 aa		13.9	□□□□□ -0.18
MECP2-215	ENST00000626422	NCOR2	Q9Y618	2525 aa		13.89	□□□□□ -0.19
MECP2-215	ENST00000626422	KANSL1L	A0AUZ9	987 aa		13.89	□□□□□ -0.19
MECP2-215	ENST00000626422	TTLL13P	A6NNM8	815 aa		13.89	□□□□□ -0.19
MECP2-215	ENST00000626422	CCL16	O15467	120 aa		13.89	□□□□□ -0.19
MECP2-215	ENST00000626422	GLRA2	P23416	452 aa		13.89	□□□□□ -0.19
MECP2-215	ENST00000626422	PSMA5	P28066	241 aa		13.89	□□□□□ -0.19
MECP2-215	ENST00000626422	MXD4	Q14582	209 aa	Predicted RBP	13.89	□□□□□ -0.19
MECP2-215	ENST00000626422	RSPO4	Q2I0M5	234 aa	Predicted RBP	13.89	□□□□□ -0.19
MECP2-215	ENST00000626422	SLC44A4	Q53GD3	710 aa		13.89	□□□□□ -0.19
MECP2-215	ENST00000626422	GALNT17	Q6IS24	598 aa		13.89	□□□□□ -0.19
MECP2-215	ENST00000626422	GPR65	Q8IYL9	337 aa		13.89	□□□□□ -0.19
MECP2-215	ENST00000626422	FGF13	Q92913	245 aa		13.89	□□□□□ -0.19
MECP2-215	ENST00000626422	ZNF274	Q96GC6	653 aa	Predicted RBP	13.89	□□□□□ -0.19
MECP2-215	ENST00000626422	TRIM6	Q9C030	488 aa	Predicted RBP	13.89	□□□□□ -0.19
MECP2-215	ENST00000626422	ZSWIM4	Q9H7M6	989 aa		13.89	□□□□□ -0.19
MECP2-215	ENST00000626422	ZSWIM6	Q9HCJ5	1215 aa		13.89	□□□□□ -0.19
MECP2-215	ENST00000626422	HCFC1R1	Q9NWW0	138 aa		13.89	□□□□□ -0.19
MECP2-215	ENST00000626422	PARP2	Q9UGN5	583 aa		13.89	□□□□□ -0.19
MECP2-215	ENST00000626422	CDH7	Q9ULB5	785 aa		13.89	□□□□□ -0.19
MECP2-215	ENST00000626422		A0A1B0GUA9	196 aa		13.88	□□□□□ -0.19
MECP2-215	ENST00000626422	CCDC194	A0A1B0GVG4	234 aa		13.88	□□□□□ -0.19
MECP2-215	ENST00000626422	CASTOR2	A6NHX0	329 aa		13.88	□□□□□ -0.19
MECP2-215	ENST00000626422	CPLX1	O14810	134 aa		13.88	□□□□□ -0.19
MECP2-215	ENST00000626422	TBX3	O15119	743 aa		13.88	□□□□□ -0.19
MECP2-215	ENST00000626422	POU5F1B	Q06416	359 aa		13.88	□□□□□ -0.19
MECP2-215	ENST00000626422	GRIK3	Q13003	919 aa		13.88	□□□□□ -0.19
MECP2-215	ENST00000626422	HSP90AA2P	Q14568	343 aa	Predicted RBP	13.88	□□□□□ -0.19
MECP2-215	ENST00000626422	PCBP1	Q15365	356 aa	Known RBP eCLIP	13.88	□□□□□ -0.19
MECP2-215	ENST00000626422	NAB2	Q15742	525 aa		13.88	□□□□□ -0.19
MECP2-215	ENST00000626422	FAM171A1	Q5VUB5	890 aa		13.88	□□□□□ -0.19
MECP2-215	ENST00000626422	SLC27A1	Q6PCB7	646 aa		13.88	□□□□□ -0.19
MECP2-215	ENST00000626422	ZC3H14	Q6PJT7	736 aa	Known RBP	13.88	□□□□□ -0.19
MECP2-215	ENST00000626422	PIK3AP1	Q6ZUJ8	805 aa		13.88	□□□□□ -0.19
MECP2-215	ENST00000626422	CEP57	Q86XR8	500 aa		13.88	□□□□□ -0.19
MECP2-215	ENST00000626422	KXD1	Q9BQD3	176 aa		13.88	□□□□□ -0.19
MECP2-215	ENST00000626422	EIF2AK1	Q9BQI3	630 aa	Known RBP	13.88	□□□□□ -0.19
MECP2-215	ENST00000626422	SPATA6	Q9NWH7	488 aa	Predicted RBP	13.88	□□□□□ -0.19
MECP2-215	ENST00000626422	USP20	Q9Y2K6	914 aa		13.88	□□□□□ -0.19
MECP2-215	ENST00000626422	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	13.88	□□□□□ -0.19
MECP2-215	ENST00000626422	FAM170B	A6NMN3	283 aa		13.87	□□□□□ -0.19
MECP2-215	ENST00000626422	PTGES	O14684	152 aa		13.87	□□□□□ -0.19
MECP2-215	ENST00000626422	KIN	O60870	393 aa	Known RBP	13.87	□□□□□ -0.19
MECP2-215	ENST00000626422	KIF4A	O95239	1232 aa		13.87	□□□□□ -0.19
MECP2-215	ENST00000626422	C8A	P07357	584 aa		13.87	□□□□□ -0.19
MECP2-215	ENST00000626422	CSTF1	Q05048	431 aa	Known RBP	13.87	□□□□□ -0.19
MECP2-215	ENST00000626422	NCBP1	Q09161	790 aa	Known RBP	13.87	□□□□□ -0.19
MECP2-215	ENST00000626422	TFDP1	Q14186	410 aa		13.87	□□□□□ -0.19
MECP2-215	ENST00000626422	UBXN2B	Q14CS0	331 aa		13.87	□□□□□ -0.19
MECP2-215	ENST00000626422	MLF2	Q15773	248 aa	Predicted RBP	13.87	□□□□□ -0.19
MECP2-215	ENST00000626422	PSMD5	Q16401	504 aa		13.87	□□□□□ -0.19
MECP2-215	ENST00000626422	TSSK4	Q6SA08	328 aa		13.87	□□□□□ -0.19
MECP2-215	ENST00000626422	RSPO2	Q6UXX9	243 aa	Predicted RBP	13.87	□□□□□ -0.19
MECP2-215	ENST00000626422	PIGO	Q8TEQ8	1089 aa		13.87	□□□□□ -0.19
MECP2-215	ENST00000626422	PIK3R5	Q8WYR1	880 aa		13.87	□□□□□ -0.19
MECP2-215	ENST00000626422	SHD	Q96IW2	340 aa		13.87	□□□□□ -0.19
MECP2-215	ENST00000626422	HSD17B14	Q9BPX1	270 aa		13.87	□□□□□ -0.19
MECP2-215	ENST00000626422	PLA2G2F	Q9BZM2	168 aa		13.87	□□□□□ -0.19
MECP2-215	ENST00000626422	GPRC5C	Q9NQ84	441 aa		13.87	□□□□□ -0.19
MECP2-215	ENST00000626422	DNMT3B	Q9UBC3	853 aa	Known RBP	13.87	□□□□□ -0.19
MECP2-215	ENST00000626422	POLI	Q9UNA4	740 aa		13.87	□□□□□ -0.19
MECP2-215	ENST00000626422	GPR179	Q6PRD1	2367 aa		13.87	□□□□□ -0.19
MECP2-215	ENST00000626422	SHISA7	A6NL88	538 aa		13.86	□□□□□ -0.19
MECP2-215	ENST00000626422	MARCH6	O60337	910 aa		13.86	□□□□□ -0.19
MECP2-215	ENST00000626422	KRT37	O76014	449 aa		13.86	□□□□□ -0.19
MECP2-215	ENST00000626422	HNRNPA1	P09651	372 aa	Known RBP eCLIP	13.86	□□□□□ -0.19
MECP2-215	ENST00000626422	GCFC2	P16383	781 aa	Known RBP	13.86	□□□□□ -0.19
MECP2-215	ENST00000626422	TUSC3	Q13454	348 aa		13.86	□□□□□ -0.19
MECP2-215	ENST00000626422	FZD5	Q13467	585 aa		13.86	□□□□□ -0.19
MECP2-215	ENST00000626422	ZNF528	Q3MIS6	628 aa		13.86	□□□□□ -0.19
MECP2-215	ENST00000626422	PPM1L	Q5SGD2	360 aa		13.86	□□□□□ -0.19
MECP2-215	ENST00000626422	VARS2	Q5ST30	1063 aa	Known RBP	13.86	□□□□□ -0.19
MECP2-215	ENST00000626422	CENPQ	Q7L2Z9	268 aa	Predicted RBP	13.86	□□□□□ -0.19
MECP2-215	ENST00000626422	MAEA	Q7L5Y9	396 aa		13.86	□□□□□ -0.19
MECP2-215	ENST00000626422	FAM177A1	Q8N128	213 aa	Predicted RBP	13.86	□□□□□ -0.19
MECP2-215	ENST00000626422	CNTNAP3B	Q96NU0	1288 aa		13.86	□□□□□ -0.19
MECP2-215	ENST00000626422	TTPAL	Q9BTX7	342 aa		13.86	□□□□□ -0.19
MECP2-215	ENST00000626422	NFKBIZ	Q9BYH8	718 aa		13.86	□□□□□ -0.19
MECP2-215	ENST00000626422	CNTNAP3	Q9BZ76	1288 aa		13.86	□□□□□ -0.19
MECP2-215	ENST00000626422	POLR3F	Q9H1D9	316 aa	Predicted RBP	13.86	□□□□□ -0.19

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