RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 GPR15P49685 360 aa4.6□□□□□ -1.67
VBP1-204ENST00000625964 LGALS4P56470 323 aa4.6□□□□□ -1.67
VBP1-204ENST00000625964 SCAND1P57086 179 aa4.6□□□□□ -1.67
VBP1-204ENST00000625964 BLOC1S1P78537 153 aa4.6□□□□□ -1.67
VBP1-204ENST00000625964 MGAT5Q09328 741 aa4.6□□□□□ -1.67
VBP1-204ENST00000625964 TRIM25Q14258 630 aaKnown RBP4.6□□□□□ -1.67
VBP1-204ENST00000625964 FSCN1Q16658 493 aaKnown RBP4.6□□□□□ -1.67
VBP1-204ENST00000625964 UGT8Q16880 541 aa4.6□□□□□ -1.67
VBP1-204ENST00000625964 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.6□□□□□ -1.67
VBP1-204ENST00000625964 CCDC178Q5BJE1 867 aa4.6□□□□□ -1.67
VBP1-204ENST00000625964 LMBR1LQ6UX01 489 aa4.6□□□□□ -1.67
VBP1-204ENST00000625964 GLB1L2Q8IW92 636 aa4.6□□□□□ -1.67
VBP1-204ENST00000625964 CMIPQ8IY22 773 aa4.6□□□□□ -1.67
VBP1-204ENST00000625964 BOLLQ8N9W6 283 aaKnown RBP4.6□□□□□ -1.67
VBP1-204ENST00000625964 OR14C36Q8NHC7 312 aa4.6□□□□□ -1.67
VBP1-204ENST00000625964 TGFBRAP1Q8WUH2 860 aa4.6□□□□□ -1.67
VBP1-204ENST00000625964 SLC9A6Q92581 669 aa4.6□□□□□ -1.67
VBP1-204ENST00000625964 CAVIN3Q969G5 261 aa4.6□□□□□ -1.67
VBP1-204ENST00000625964 AHCYL2Q96HN2 611 aaKnown RBP4.6□□□□□ -1.67
VBP1-204ENST00000625964 PDCD2LQ9BRP1 358 aa4.6□□□□□ -1.67
VBP1-204ENST00000625964 FDXACB1Q9BRP7 624 aaPredicted RBP4.6□□□□□ -1.67
VBP1-204ENST00000625964 KCNH6Q9H252 994 aa4.6□□□□□ -1.67
VBP1-204ENST00000625964 C14orf119Q9NWQ9 140 aa4.6□□□□□ -1.67
VBP1-204ENST00000625964 TESQ9UGI8 421 aaKnown RBP4.6□□□□□ -1.67
VBP1-204ENST00000625964 PRSS50Q9UI38 385 aa4.6□□□□□ -1.67
VBP1-204ENST00000625964 TMPRSS11EQ9UL52 423 aa4.6□□□□□ -1.67
VBP1-204ENST00000625964 EDARQ9UNE0 448 aa4.6□□□□□ -1.67
VBP1-204ENST00000625964 EPN1Q9Y6I3 576 aaPredicted RBP4.6□□□□□ -1.67
VBP1-204ENST00000625964 GAGE12BA1L429 117 aa4.59□□□□□ -1.67
VBP1-204ENST00000625964 GAGE12HA6NDE8 117 aa4.59□□□□□ -1.67
VBP1-204ENST00000625964 PRKD3O94806 890 aa4.59□□□□□ -1.67
VBP1-204ENST00000625964 SEC24DO94855 1032 aaPredicted RBP4.59□□□□□ -1.67
VBP1-204ENST00000625964 LY86O95711 162 aa4.59□□□□□ -1.67
VBP1-204ENST00000625964 ONECUT2O95948 504 aa4.59□□□□□ -1.67
VBP1-204ENST00000625964 HKR1P10072 659 aa4.59□□□□□ -1.67
VBP1-204ENST00000625964 ENPP1P22413 925 aa4.59□□□□□ -1.67
VBP1-204ENST00000625964 KIR2DL3P43628 341 aa4.59□□□□□ -1.67
VBP1-204ENST00000625964 NPEPPSP55786 919 aa4.59□□□□□ -1.67
VBP1-204ENST00000625964 CD69Q07108 199 aa4.59□□□□□ -1.67
VBP1-204ENST00000625964 FOXF2Q12947 444 aa4.59□□□□□ -1.67
VBP1-204ENST00000625964 RNF219Q5W0B1 726 aaPredicted RBP4.59□□□□□ -1.67
VBP1-204ENST00000625964 DDX42Q86XP3 938 aaKnown RBP eCLIP4.59□□□□□ -1.67
VBP1-204ENST00000625964 LYSMD2Q8IV50 215 aa4.59□□□□□ -1.67
VBP1-204ENST00000625964 UNC5BQ8IZJ1 945 aa4.59□□□□□ -1.67
VBP1-204ENST00000625964 SIMC1Q8NDZ2 872 aa4.59□□□□□ -1.67
VBP1-204ENST00000625964 RSAD2Q8WXG1 361 aa4.59□□□□□ -1.67
VBP1-204ENST00000625964 LRFN3Q9BTN0 628 aa4.59□□□□□ -1.67
VBP1-204ENST00000625964 QRSL1Q9H0R6 528 aaKnown RBP4.59□□□□□ -1.67
VBP1-204ENST00000625964 EVLQ9UI08 416 aaPredicted RBP4.59□□□□□ -1.67
VBP1-204ENST00000625964 ATP8A1Q9Y2Q0 1164 aa4.59□□□□□ -1.67
VBP1-204ENST00000625964 POLR2AP24928 1970 aaKnown RBP4.58□□□□□ -1.68
VBP1-204ENST00000625964 MTSS1O43312 755 aa4.58□□□□□ -1.68
VBP1-204ENST00000625964 ALDH1A2O94788 518 aa4.58□□□□□ -1.68
VBP1-204ENST00000625964 CXCR5P32302 372 aa4.58□□□□□ -1.68
VBP1-204ENST00000625964 SEC24CP53992 1094 aa4.58□□□□□ -1.68
VBP1-204ENST00000625964 NHLH1Q02575 133 aa4.58□□□□□ -1.68
VBP1-204ENST00000625964 FAPQ12884 760 aa4.58□□□□□ -1.68
VBP1-204ENST00000625964 SRRM1Q8IYB3 904 aaKnown RBP4.58□□□□□ -1.68
VBP1-204ENST00000625964 PIK3C3Q8NEB9 887 aa4.58□□□□□ -1.68
VBP1-204ENST00000625964 PPP1R14CQ8TAE6 165 aa4.58□□□□□ -1.68
VBP1-204ENST00000625964 ING3Q9NXR8 418 aa4.58□□□□□ -1.68
VBP1-204ENST00000625964 DPP7Q9UHL4 492 aa4.58□□□□□ -1.68
VBP1-204ENST00000625964 EIF2B4Q9UI10 523 aaKnown RBP4.58□□□□□ -1.68
VBP1-204ENST00000625964 CDY2AQ9Y6F7 541 aa4.58□□□□□ -1.68
VBP1-204ENST00000625964 COL3A1P02461 1466 aaPredicted RBP4.57□□□□□ -1.68
VBP1-204ENST00000625964 AHRRA9YTQ3 701 aa4.57□□□□□ -1.68
VBP1-204ENST00000625964 RNASET2O00584 256 aaKnown RBP4.57□□□□□ -1.68
VBP1-204ENST00000625964 HK1P19367 917 aa4.57□□□□□ -1.68
VBP1-204ENST00000625964 CDK17Q00537 523 aa4.57□□□□□ -1.68
VBP1-204ENST00000625964 SLC41A1Q8IVJ1 513 aa4.57□□□□□ -1.68
VBP1-204ENST00000625964 CAGE1Q8TC20 777 aa4.57□□□□□ -1.68
VBP1-204ENST00000625964 LMBR1Q8WVP7 490 aa4.57□□□□□ -1.68
VBP1-204ENST00000625964 RAX2Q96IS3 184 aa4.57□□□□□ -1.68
VBP1-204ENST00000625964 DCLRE1CQ96SD1 692 aaKnown RBP4.57□□□□□ -1.68
VBP1-204ENST00000625964 ZNF768Q9H5H4 540 aaKnown RBP4.57□□□□□ -1.68
VBP1-204ENST00000625964 ANKFY1Q9P2R3 1169 aa4.57□□□□□ -1.68
VBP1-204ENST00000625964 A0A1W2PR48 441 aa4.56□□□□□ -1.68
VBP1-204ENST00000625964 LPXNO60711 386 aa4.56□□□□□ -1.68
VBP1-204ENST00000625964 PRAMEF4O60810 478 aa4.56□□□□□ -1.68
VBP1-204ENST00000625964 BMPR1AP36894 532 aa4.56□□□□□ -1.68
VBP1-204ENST00000625964 KRTAP10-6P60371 365 aaPredicted RBP4.56□□□□□ -1.68
VBP1-204ENST00000625964 CCT2P78371 535 aaKnown RBP4.56□□□□□ -1.68
VBP1-204ENST00000625964 GLB1L3Q8NCI6 653 aaPredicted RBP4.56□□□□□ -1.68
VBP1-204ENST00000625964 SLC5A4Q9NY91 659 aa4.56□□□□□ -1.68
VBP1-204ENST00000625964 RNF7Q9UBF6 113 aa4.56□□□□□ -1.68
VBP1-204ENST00000625964 DKK2Q9UBU2 259 aa4.56□□□□□ -1.68
VBP1-204ENST00000625964 WASHC2AQ641Q2 1341 aa4.56□□□□□ -1.68
VBP1-204ENST00000625964 PIPSLA2A3N6 862 aa4.56□□□□□ -1.68
VBP1-204ENST00000625964 NRP1O14786 923 aa4.56□□□□□ -1.68
VBP1-204ENST00000625964 SRSF2Q01130 221 aaKnown RBP4.56□□□□□ -1.68
VBP1-204ENST00000625964 TOR2AQ5JU69 321 aa4.56□□□□□ -1.68
VBP1-204ENST00000625964 CMTR2Q8IYT2 770 aaKnown RBP4.56□□□□□ -1.68
VBP1-204ENST00000625964 MSL3Q8N5Y2 521 aaKnown RBP4.56□□□□□ -1.68
VBP1-204ENST00000625964 CNTD1Q8N815 330 aa4.56□□□□□ -1.68
VBP1-204ENST00000625964 AUTS2Q8WXX7 1259 aa4.56□□□□□ -1.68
VBP1-204ENST00000625964 NDC1Q9BTX1 674 aa4.56□□□□□ -1.68
VBP1-204ENST00000625964 DNAJC28Q9NX36 388 aa4.56□□□□□ -1.68
VBP1-204ENST00000625964 PHLDB1Q86UU1 1377 aa4.55□□□□□ -1.68
VBP1-204ENST00000625964 ZFPL1O95159 310 aa4.55□□□□□ -1.68
VBP1-204ENST00000625964 LTA4HP09960 611 aaKnown RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms