RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 MYH11P35749 1972 aa16.89■□□□□ 0.29
NPHP4-211ENST00000622020 ADAMTSL1Q8N6G6 1762 aa16.88■□□□□ 0.29
NPHP4-211ENST00000622020 SLC16A4O15374 487 aa16.88■□□□□ 0.29
NPHP4-211ENST00000622020 THAP12O43422 761 aa16.88■□□□□ 0.29
NPHP4-211ENST00000622020 ADCY8P40145 1251 aa16.88■□□□□ 0.29
NPHP4-211ENST00000622020 ITIH4Q14624 930 aa16.88■□□□□ 0.29
NPHP4-211ENST00000622020 PPP2R5AQ15172 486 aa16.88■□□□□ 0.29
NPHP4-211ENST00000622020 FITM2Q8N6M3 262 aa16.88■□□□□ 0.29
NPHP4-211ENST00000622020 CERKQ8TCT0 537 aa16.88■□□□□ 0.29
NPHP4-211ENST00000622020 MIEF2Q96C03 454 aa16.88■□□□□ 0.29
NPHP4-211ENST00000622020 TMEM117Q9H0C3 514 aa16.88■□□□□ 0.29
NPHP4-211ENST00000622020 LTBP4Q8N2S1 1624 aa16.88■□□□□ 0.29
NPHP4-211ENST00000622020 TOM1O60784 492 aa16.88■□□□□ 0.29
NPHP4-211ENST00000622020 UPP2O95045 317 aa16.88■□□□□ 0.29
NPHP4-211ENST00000622020 CETPP11597 493 aa16.88■□□□□ 0.29
NPHP4-211ENST00000622020 STX2P32856 288 aa16.88■□□□□ 0.29
NPHP4-211ENST00000622020 MXI1P50539 228 aa16.88■□□□□ 0.29
NPHP4-211ENST00000622020 ITGA8P53708 1063 aa16.88■□□□□ 0.29
NPHP4-211ENST00000622020 RWDD2BP57060 319 aa16.88■□□□□ 0.29
NPHP4-211ENST00000622020 VSTM1Q6UX27 236 aa16.88■□□□□ 0.29
NPHP4-211ENST00000622020 SLC17A8Q8NDX2 589 aa16.88■□□□□ 0.29
NPHP4-211ENST00000622020 FBXO28Q9NVF7 368 aa16.88■□□□□ 0.29
NPHP4-211ENST00000622020 HSPBP1Q9NZL4 362 aa16.88■□□□□ 0.29
NPHP4-211ENST00000622020 PARP2Q9UGN5 583 aa16.88■□□□□ 0.29
NPHP4-211ENST00000622020 ANAPC7Q9UJX3 599 aa16.88■□□□□ 0.29
NPHP4-211ENST00000622020 GSTTP1A0A1W2PQM5 241 aa16.88■□□□□ 0.29
NPHP4-211ENST00000622020 IPO5O00410 1097 aaKnown RBP16.88■□□□□ 0.29
NPHP4-211ENST00000622020 SPAG7O75391 227 aa16.88■□□□□ 0.29
NPHP4-211ENST00000622020 NQO1P15559 274 aaKnown RBP16.88■□□□□ 0.29
NPHP4-211ENST00000622020 RASA3Q14644 834 aa16.88■□□□□ 0.29
NPHP4-211ENST00000622020 SIX1Q15475 284 aaPredicted RBP16.88■□□□□ 0.29
NPHP4-211ENST00000622020 CEP55Q53EZ4 464 aa16.88■□□□□ 0.29
NPHP4-211ENST00000622020 C11orf63Q6NUN7 778 aa16.88■□□□□ 0.29
NPHP4-211ENST00000622020 TGS1Q96RS0 853 aaKnown RBP16.88■□□□□ 0.29
NPHP4-211ENST00000622020 TUFT1Q9NNX1 390 aa16.88■□□□□ 0.29
NPHP4-211ENST00000622020 CNOT7Q9UIV1 285 aaKnown RBP16.88■□□□□ 0.29
NPHP4-211ENST00000622020 ATAD5Q96QE3 1844 aa16.88■□□□□ 0.29
NPHP4-211ENST00000622020 WNK3Q9BYP7 1800 aa16.88■□□□□ 0.29
NPHP4-211ENST00000622020 AFF2P51816 1311 aa16.87■□□□□ 0.29
NPHP4-211ENST00000622020 TP73O15350 636 aa16.87■□□□□ 0.29
NPHP4-211ENST00000622020 NEBLO76041 1014 aa16.87■□□□□ 0.29
NPHP4-211ENST00000622020 PEX3P56589 373 aa16.87■□□□□ 0.29
NPHP4-211ENST00000622020 FMO1Q01740 532 aa16.87■□□□□ 0.29
NPHP4-211ENST00000622020 RNASELQ05823 741 aaKnown RBP16.87■□□□□ 0.29
NPHP4-211ENST00000622020 C1orf220Q5T0J3 134 aa16.87■□□□□ 0.29
NPHP4-211ENST00000622020 TMEM179Q6ZVK1 233 aa16.87■□□□□ 0.29
NPHP4-211ENST00000622020 CPA5Q8WXQ8 436 aa16.87■□□□□ 0.29
NPHP4-211ENST00000622020 P3H4Q92791 437 aa16.87■□□□□ 0.29
NPHP4-211ENST00000622020 SLC5A5Q92911 643 aa16.87■□□□□ 0.29
NPHP4-211ENST00000622020 R3HDM2Q9Y2K5 976 aaKnown RBP16.87■□□□□ 0.29
NPHP4-211ENST00000622020 USP20Q9Y2K6 914 aa16.87■□□□□ 0.29
NPHP4-211ENST00000622020 CLGNO14967 610 aa16.87■□□□□ 0.29
NPHP4-211ENST00000622020 PIAS1O75925 651 aa16.87■□□□□ 0.29
NPHP4-211ENST00000622020 POLR2MP0CAP2 368 aa16.87■□□□□ 0.29
NPHP4-211ENST00000622020 STAT2P52630 851 aa16.87■□□□□ 0.29
NPHP4-211ENST00000622020 GRIPAP1Q4V328 841 aa16.87■□□□□ 0.29
NPHP4-211ENST00000622020 ZFYVE27Q5T4F4 411 aa16.87■□□□□ 0.29
NPHP4-211ENST00000622020 LMBRD2Q68DH5 695 aaPredicted RBP16.87■□□□□ 0.29
NPHP4-211ENST00000622020 SPOCK2Q92563 424 aa16.87■□□□□ 0.29
NPHP4-211ENST00000622020 LBHD1Q9BQE6 289 aaPredicted RBP16.87■□□□□ 0.29
NPHP4-211ENST00000622020 WNT8AQ9H1J5 351 aa16.87■□□□□ 0.29
NPHP4-211ENST00000622020 KLHL11Q9NVR0 708 aa16.87■□□□□ 0.29
NPHP4-211ENST00000622020 RGL2O15211 777 aa16.86■□□□□ 0.29
NPHP4-211ENST00000622020 SUN1O94901 812 aa16.86■□□□□ 0.29
NPHP4-211ENST00000622020 ADRB2P07550 413 aa16.86■□□□□ 0.29
NPHP4-211ENST00000622020 SOX10P56693 466 aa16.86■□□□□ 0.29
NPHP4-211ENST00000622020 MTM1Q13496 603 aa16.86■□□□□ 0.29
NPHP4-211ENST00000622020 SCAF8Q9UPN6 1271 aaKnown RBP16.86■□□□□ 0.29
NPHP4-211ENST00000622020 USTQ9Y2C2 406 aa16.86■□□□□ 0.29
NPHP4-211ENST00000622020 HHIPL2Q6UWX4 724 aa16.86■□□□□ 0.29
NPHP4-211ENST00000622020 INTS8Q75QN2 995 aaKnown RBP16.86■□□□□ 0.29
NPHP4-211ENST00000622020 ERICH1Q86X53 443 aa16.86■□□□□ 0.29
NPHP4-211ENST00000622020 SP8Q8IXZ3 490 aa16.86■□□□□ 0.29
NPHP4-211ENST00000622020 CSRNP1Q96S65 589 aa16.86■□□□□ 0.29
NPHP4-211ENST00000622020 STMN4Q9H169 189 aaPredicted RBP16.86■□□□□ 0.29
NPHP4-211ENST00000622020 NOCTQ9UK39 431 aaKnown RBP16.86■□□□□ 0.29
NPHP4-211ENST00000622020 CYP11B1P15538 503 aa16.86■□□□□ 0.29
NPHP4-211ENST00000622020 SPDYCQ5MJ68 293 aa16.86■□□□□ 0.29
NPHP4-211ENST00000622020 SPATA21Q7Z572 469 aa16.86■□□□□ 0.29
NPHP4-211ENST00000622020 XXYLT1Q8NBI6 393 aa16.86■□□□□ 0.29
NPHP4-211ENST00000622020 CD101Q93033 1021 aa16.86■□□□□ 0.29
NPHP4-211ENST00000622020 WDR11Q9BZH6 1224 aa16.86■□□□□ 0.29
NPHP4-211ENST00000622020 HOMER2Q9NSB8 354 aa16.86■□□□□ 0.29
NPHP4-211ENST00000622020 C21orf2O43822 256 aa16.85■□□□□ 0.29
NPHP4-211ENST00000622020 KIF1CO43896 1103 aaKnown RBP16.85■□□□□ 0.29
NPHP4-211ENST00000622020 MAPK4P31152 587 aa16.85■□□□□ 0.29
NPHP4-211ENST00000622020 SLC15A2Q16348 729 aa16.85■□□□□ 0.29
NPHP4-211ENST00000622020 RPAINQ86UA6 219 aa16.85■□□□□ 0.29
NPHP4-211ENST00000622020 RSRC1Q96IZ7 334 aaKnown RBP16.85■□□□□ 0.29
NPHP4-211ENST00000622020 RPS6KC1Q96S38 1066 aa16.85■□□□□ 0.29
NPHP4-211ENST00000622020 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.85■□□□□ 0.297e-12■■■■□ 24.5
NPHP4-211ENST00000622020 LARSQ9P2J5 1176 aaKnown RBP16.85■□□□□ 0.29
NPHP4-211ENST00000622020 TCP10L2B9ZVM9 353 aa16.85■□□□□ 0.29
NPHP4-211ENST00000622020 GJB6O95452 261 aa16.85■□□□□ 0.29
NPHP4-211ENST00000622020 HSPA6P17066 643 aa16.85■□□□□ 0.29
NPHP4-211ENST00000622020 ZNF131P52739 623 aa16.85■□□□□ 0.29
NPHP4-211ENST00000622020 COPS2P61201 443 aa16.85■□□□□ 0.29
NPHP4-211ENST00000622020 PPP2R5CQ13362 524 aa16.85■□□□□ 0.29
NPHP4-211ENST00000622020 TMED2Q15363 201 aa16.85■□□□□ 0.29
NPHP4-211ENST00000622020 MIER3Q7Z3K6 550 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms