RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 COPB1P53618 953 aaKnown RBP8.74□□□□□ -1.01
CPNE3-209ENST00000620393 UBASH3AP57075 661 aa8.74□□□□□ -1.01
CPNE3-209ENST00000620393 FOXK1P85037 733 aa8.74□□□□□ -1.01
CPNE3-209ENST00000620393 ENPEPQ07075 957 aa8.74□□□□□ -1.01
CPNE3-209ENST00000620393 NFX1Q12986 1120 aaKnown RBP8.74□□□□□ -1.01
CPNE3-209ENST00000620393 LPIN1Q14693 890 aa8.74□□□□□ -1.01
CPNE3-209ENST00000620393 SNRNP35Q16560 246 aaKnown RBP8.74□□□□□ -1.01
CPNE3-209ENST00000620393 KYAT1Q16773 422 aa8.74□□□□□ -1.01
CPNE3-209ENST00000620393 LRRC26Q2I0M4 334 aa8.74□□□□□ -1.01
CPNE3-209ENST00000620393 FILIP1LQ4L180 1135 aa8.74□□□□□ -1.01
CPNE3-209ENST00000620393 NOTUMQ6P988 496 aa8.74□□□□□ -1.01
CPNE3-209ENST00000620393 CRELD2Q6UXH1 353 aaPredicted RBP8.74□□□□□ -1.01
CPNE3-209ENST00000620393 FAM43BQ6ZT52 329 aaPredicted RBP8.74□□□□□ -1.01
CPNE3-209ENST00000620393 INTS8Q75QN2 995 aaKnown RBP8.74□□□□□ -1.01
CPNE3-209ENST00000620393 LRRC8DQ7L1W4 858 aa8.74□□□□□ -1.01
CPNE3-209ENST00000620393 APBB1IPQ7Z5R6 666 aaPredicted RBP8.74□□□□□ -1.01
CPNE3-209ENST00000620393 CDR2LQ86X02 465 aaPredicted RBP8.74□□□□□ -1.01
CPNE3-209ENST00000620393 CBWD2Q8IUF1 395 aa8.74□□□□□ -1.01
CPNE3-209ENST00000620393 TRIM59Q8IWR1 403 aa8.74□□□□□ -1.01
CPNE3-209ENST00000620393 SAAL1Q96ER3 474 aa8.74□□□□□ -1.01
CPNE3-209ENST00000620393 CCDC51Q96ER9 411 aa8.74□□□□□ -1.01
CPNE3-209ENST00000620393 ADPGKQ9BRR6 497 aa8.74□□□□□ -1.01
CPNE3-209ENST00000620393 FAM213AQ9BRX8 229 aa8.74□□□□□ -1.01
CPNE3-209ENST00000620393 NOC4LQ9BVI4 516 aaKnown RBP8.74□□□□□ -1.01
CPNE3-209ENST00000620393 OSBPL7Q9BZF2 842 aa8.74□□□□□ -1.01
CPNE3-209ENST00000620393 TRIM5Q9C035 493 aa8.74□□□□□ -1.01
CPNE3-209ENST00000620393 CDT1Q9H211 546 aa8.74□□□□□ -1.01
CPNE3-209ENST00000620393 VPS16Q9H269 839 aa8.74□□□□□ -1.01
CPNE3-209ENST00000620393 RTN4Q9NQC3 1192 aaKnown RBP8.74□□□□□ -1.01
CPNE3-209ENST00000620393 IFNKQ9P0W0 207 aa8.74□□□□□ -1.01
CPNE3-209ENST00000620393 ANKFY1Q9P2R3 1169 aa8.74□□□□□ -1.01
CPNE3-209ENST00000620393 PADI3Q9ULW8 664 aa8.74□□□□□ -1.01
CPNE3-209ENST00000620393 ATP11BQ9Y2G3 1177 aa8.74□□□□□ -1.01
CPNE3-209ENST00000620393 WDR81Q562E7 1941 aa8.74□□□□□ -1.01
CPNE3-209ENST00000620393 A0A1B0GTH6 734 aa8.73□□□□□ -1.01
CPNE3-209ENST00000620393 CBFA2T2O43439 604 aa8.73□□□□□ -1.01
CPNE3-209ENST00000620393 FAM189A1O60320 539 aa8.73□□□□□ -1.01
CPNE3-209ENST00000620393 PARNO95453 639 aaKnown RBP8.73□□□□□ -1.01
CPNE3-209ENST00000620393 ADCY5O95622 1261 aa8.73□□□□□ -1.01
CPNE3-209ENST00000620393 TPM2P07951 284 aa8.73□□□□□ -1.01
CPNE3-209ENST00000620393 CLTAP09496 248 aa8.73□□□□□ -1.01
CPNE3-209ENST00000620393 NUDT7P0C024 238 aa8.73□□□□□ -1.01
CPNE3-209ENST00000620393 HARSP12081 509 aaKnown RBP8.73□□□□□ -1.01
CPNE3-209ENST00000620393 KRT13P13646 458 aa8.73□□□□□ -1.01
CPNE3-209ENST00000620393 PRKCSHP14314 528 aaPredicted RBP8.73□□□□□ -1.01
CPNE3-209ENST00000620393 ZSCAN20P17040 1043 aaPredicted RBP8.73□□□□□ -1.01
CPNE3-209ENST00000620393 CD52P31358 61 aa8.73□□□□□ -1.01
CPNE3-209ENST00000620393 ACOT2P49753 483 aa8.73□□□□□ -1.01
CPNE3-209ENST00000620393 VAMP7P51809 220 aa8.73□□□□□ -1.01
CPNE3-209ENST00000620393 ZNF75DP51815 510 aa8.73□□□□□ -1.01
CPNE3-209ENST00000620393 PPP2R3AQ06190 1150 aa8.73□□□□□ -1.01
CPNE3-209ENST00000620393 CYP24A1Q07973 514 aa8.73□□□□□ -1.01
CPNE3-209ENST00000620393 DSC3Q14574 896 aa8.73□□□□□ -1.01
CPNE3-209ENST00000620393 MBTPS1Q14703 1052 aa8.73□□□□□ -1.01
CPNE3-209ENST00000620393 GPNMBQ14956 572 aa8.73□□□□□ -1.01
CPNE3-209ENST00000620393 NOLC1Q14978 699 aaKnown RBP eCLIP8.73□□□□□ -1.01
CPNE3-209ENST00000620393 MAN2A1Q16706 1144 aa8.73□□□□□ -1.01
CPNE3-209ENST00000620393 DCAF4L1Q3SXM0 396 aa8.73□□□□□ -1.01
CPNE3-209ENST00000620393 ZNF568Q3ZCX4 644 aa8.73□□□□□ -1.01
CPNE3-209ENST00000620393 VWA3BQ502W6 1294 aa8.73□□□□□ -1.01
CPNE3-209ENST00000620393 ZBTB41Q5SVQ8 909 aa8.73□□□□□ -1.01
CPNE3-209ENST00000620393 UBXN11Q5T124 520 aa8.73□□□□□ -1.01
CPNE3-209ENST00000620393 SLC27A1Q6PCB7 646 aa8.73□□□□□ -1.01
CPNE3-209ENST00000620393 PLPP6Q8IY26 295 aa8.73□□□□□ -1.01
CPNE3-209ENST00000620393 THNSL1Q8IYQ7 743 aa8.73□□□□□ -1.01
CPNE3-209ENST00000620393 PARD3BQ8TEW8 1205 aa8.73□□□□□ -1.01
CPNE3-209ENST00000620393 TRAIPQ9BWF2 469 aa8.73□□□□□ -1.01
CPNE3-209ENST00000620393 XPO4Q9C0E2 1151 aaKnown RBP8.73□□□□□ -1.01
CPNE3-209ENST00000620393 HIPK3Q9H422 1215 aa8.73□□□□□ -1.01
CPNE3-209ENST00000620393 TMEM39AQ9NV64 488 aa8.73□□□□□ -1.01
CPNE3-209ENST00000620393 TAB2Q9NYJ8 693 aa8.73□□□□□ -1.01
CPNE3-209ENST00000620393 CPSF3Q9UKF6 684 aaKnown RBP8.73□□□□□ -1.01
CPNE3-209ENST00000620393 TBX21Q9UL17 535 aa8.73□□□□□ -1.01
CPNE3-209ENST00000620393 PIN4Q9Y237 131 aaKnown RBP8.73□□□□□ -1.01
CPNE3-209ENST00000620393 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.73□□□□□ -1.01
CPNE3-209ENST00000620393 LGALS16A8MUM7 142 aa8.72□□□□□ -1.01
CPNE3-209ENST00000620393 KIAA0355O15063 1070 aa8.72□□□□□ -1.01
CPNE3-209ENST00000620393 TEX33O43247 280 aa8.72□□□□□ -1.01
CPNE3-209ENST00000620393 NBNO60934 754 aa8.72□□□□□ -1.01
CPNE3-209ENST00000620393 ZNF623O75123 536 aa8.72□□□□□ -1.01
CPNE3-209ENST00000620393 NPTXRO95502 500 aa8.72□□□□□ -1.01
CPNE3-209ENST00000620393 TPM3P06753 285 aa8.72□□□□□ -1.01
CPNE3-209ENST00000620393 ADRB2P07550 413 aa8.72□□□□□ -1.01
CPNE3-209ENST00000620393 CLTBP09497 229 aa8.72□□□□□ -1.01
CPNE3-209ENST00000620393 STAG3L1P0CL83 205 aa8.72□□□□□ -1.01
CPNE3-209ENST00000620393 TNFSF9P41273 254 aa8.72□□□□□ -1.01
CPNE3-209ENST00000620393 GRM5P41594 1212 aa8.72□□□□□ -1.01
CPNE3-209ENST00000620393 CLDN10P78369 228 aa8.72□□□□□ -1.01
CPNE3-209ENST00000620393 FAM189BP81408 668 aa8.72□□□□□ -1.01
CPNE3-209ENST00000620393 KCNH2Q12809 1159 aa8.72□□□□□ -1.01
CPNE3-209ENST00000620393 BFSP1Q12934 665 aa8.72□□□□□ -1.01
CPNE3-209ENST00000620393 PAK2Q13177 524 aa8.72□□□□□ -1.01
CPNE3-209ENST00000620393 PSMD6Q15008 389 aa8.72□□□□□ -1.01
CPNE3-209ENST00000620393 SURF1Q15526 300 aa8.72□□□□□ -1.01
CPNE3-209ENST00000620393 SEZ6Q53EL9 994 aa8.72□□□□□ -1.01
CPNE3-209ENST00000620393 MIIPQ5JXC2 388 aa8.72□□□□□ -1.01
CPNE3-209ENST00000620393 C1orf220Q5T0J3 134 aa8.72□□□□□ -1.01
CPNE3-209ENST00000620393 TWF2Q6IBS0 349 aaKnown RBP8.72□□□□□ -1.01
CPNE3-209ENST00000620393 USP37Q86T82 979 aa8.72□□□□□ -1.01
CPNE3-209ENST00000620393 PLEKHO2Q8TD55 490 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms