RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 PPP1R10Q96QC0 940 aaKnown RBP9.05□□□□□ -0.96
NEK3-209ENST00000618856 ADPGKQ9BRR6 497 aa9.05□□□□□ -0.96
NEK3-209ENST00000618856 LRRC27Q9C0I9 530 aa9.05□□□□□ -0.96
NEK3-209ENST00000618856 NSUN3Q9H649 340 aaKnown RBP9.05□□□□□ -0.96
NEK3-209ENST00000618856 MARCH5Q9NX47 278 aa9.05□□□□□ -0.96
NEK3-209ENST00000618856 SNTG2Q9NY99 539 aa9.05□□□□□ -0.96
NEK3-209ENST00000618856 FAM13BQ9NYF5 915 aa9.05□□□□□ -0.96
NEK3-209ENST00000618856 STK39Q9UEW8 545 aa9.05□□□□□ -0.96
NEK3-209ENST00000618856 CIZ1Q9ULV3 898 aaPredicted RBP9.05□□□□□ -0.96
NEK3-209ENST00000618856 IRAK3Q9Y616 596 aa9.05□□□□□ -0.96
NEK3-209ENST00000618856 A0A0B4J269 797 aa9.04□□□□□ -0.96
NEK3-209ENST00000618856 NRP1O14786 923 aa9.04□□□□□ -0.96
NEK3-209ENST00000618856 NCK2O43639 380 aa9.04□□□□□ -0.96
NEK3-209ENST00000618856 TBCAO75347 108 aaKnown RBP9.04□□□□□ -0.96
NEK3-209ENST00000618856 ALDH2P05091 517 aa9.04□□□□□ -0.96
NEK3-209ENST00000618856 KRT18P05783 430 aaKnown RBP9.04□□□□□ -0.96
NEK3-209ENST00000618856 KCNE1P15382 129 aa9.04□□□□□ -0.96
NEK3-209ENST00000618856 PFKFB1P16118 471 aa9.04□□□□□ -0.96
NEK3-209ENST00000618856 IBSPP21815 317 aaPredicted RBP9.04□□□□□ -0.96
NEK3-209ENST00000618856 LTBRP36941 435 aa9.04□□□□□ -0.96
NEK3-209ENST00000618856 AMPD3Q01432 767 aa9.04□□□□□ -0.96
NEK3-209ENST00000618856 POU5F1Q01860 360 aaKnown RBP9.04□□□□□ -0.96
NEK3-209ENST00000618856 HYAL1Q12794 435 aa9.04□□□□□ -0.96
NEK3-209ENST00000618856 STRN3Q13033 797 aa9.04□□□□□ -0.96
NEK3-209ENST00000618856 ZNF568Q3ZCX4 644 aa9.04□□□□□ -0.96
NEK3-209ENST00000618856 ZC2HC1CQ53FD0 456 aaPredicted RBP9.04□□□□□ -0.96
NEK3-209ENST00000618856 TCEAL5Q5H9L2 206 aa9.04□□□□□ -0.96
NEK3-209ENST00000618856 SPOUT1Q5T280 376 aaKnown RBP9.04□□□□□ -0.96
NEK3-209ENST00000618856 EPM2AIP1Q7L775 607 aaPredicted RBP9.04□□□□□ -0.96
NEK3-209ENST00000618856 DDX53Q86TM3 631 aaKnown RBP9.04□□□□□ -0.96
NEK3-209ENST00000618856 SFR1Q86XK3 245 aa9.04□□□□□ -0.96
NEK3-209ENST00000618856 GPR65Q8IYL9 337 aa9.04□□□□□ -0.96
NEK3-209ENST00000618856 THNSL1Q8IYQ7 743 aa9.04□□□□□ -0.96
NEK3-209ENST00000618856 ATXN2LQ8WWM7 1075 aaKnown RBP9.04□□□□□ -0.96
NEK3-209ENST00000618856 DHX58Q96C10 678 aa9.04□□□□□ -0.96
NEK3-209ENST00000618856 ZBTB45Q96K62 511 aaPredicted RBP9.04□□□□□ -0.96
NEK3-209ENST00000618856 ZBP1Q9H171 429 aa9.04□□□□□ -0.96
NEK3-209ENST00000618856 NGRNQ9NPE2 291 aaKnown RBP9.04□□□□□ -0.96
NEK3-209ENST00000618856 PRDM6Q9NQX0 595 aa9.04□□□□□ -0.96
NEK3-209ENST00000618856 TLR9Q9NR96 1032 aa9.04□□□□□ -0.96
NEK3-209ENST00000618856 CNTN3Q9P232 1028 aa9.04□□□□□ -0.96
NEK3-209ENST00000618856 USP25Q9UHP3 1055 aa9.04□□□□□ -0.96
NEK3-209ENST00000618856 COG5Q9UP83 839 aa9.04□□□□□ -0.96
NEK3-209ENST00000618856 INPP5FQ9Y2H2 1132 aa9.04□□□□□ -0.96
NEK3-209ENST00000618856 BDP1A6H8Y1 2624 aa9.03□□□□□ -0.96
NEK3-209ENST00000618856 TCHHQ07283 1943 aa9.03□□□□□ -0.96
NEK3-209ENST00000618856 SMIM28A0A1B0GU29 152 aa9.03□□□□□ -0.96
NEK3-209ENST00000618856 A0A1B0GVL5 298 aa9.03□□□□□ -0.96
NEK3-209ENST00000618856 PVALEFA0A1B0GWK0 134 aa9.03□□□□□ -0.96
NEK3-209ENST00000618856 NT5C1B-RDH14C9J2C7 533 aa9.03□□□□□ -0.96
NEK3-209ENST00000618856 ANKRD63C9JTQ0 380 aa9.03□□□□□ -0.96
NEK3-209ENST00000618856 TMEM189-UBE2V1I3L0A0 370 aa9.03□□□□□ -0.96
NEK3-209ENST00000618856 K7ENM7 598 aa9.03□□□□□ -0.96
NEK3-209ENST00000618856 CLDN3O15551 220 aa9.03□□□□□ -0.96
NEK3-209ENST00000618856 KLRC4O43908 158 aa9.03□□□□□ -0.96
NEK3-209ENST00000618856 ZC3H11AO75152 810 aaKnown RBP eCLIP9.03□□□□□ -0.96
NEK3-209ENST00000618856 MYL1P05976 194 aa9.03□□□□□ -0.96
NEK3-209ENST00000618856 CTSAP10619 480 aa9.03□□□□□ -0.96
NEK3-209ENST00000618856 LIG1P18858 919 aa9.03□□□□□ -0.96
NEK3-209ENST00000618856 ADSSP30520 456 aa9.03□□□□□ -0.96
NEK3-209ENST00000618856 HOXD13P35453 343 aa9.03□□□□□ -0.96
NEK3-209ENST00000618856 CASP5P51878 434 aa9.03□□□□□ -0.96
NEK3-209ENST00000618856 NDUFA8P51970 172 aa9.03□□□□□ -0.96
NEK3-209ENST00000618856 KRT17Q04695 432 aa9.03□□□□□ -0.96
NEK3-209ENST00000618856 RNASELQ05823 741 aaKnown RBP9.03□□□□□ -0.96
NEK3-209ENST00000618856 ADAM15Q13444 863 aa9.03□□□□□ -0.96
NEK3-209ENST00000618856 TUSC3Q13454 348 aa9.03□□□□□ -0.96
NEK3-209ENST00000618856 ALCAMQ13740 583 aa9.03□□□□□ -0.96
NEK3-209ENST00000618856 NOLC1Q14978 699 aaKnown RBP eCLIP9.03□□□□□ -0.96
NEK3-209ENST00000618856 CCDC85BQ15834 202 aaPredicted RBP9.03□□□□□ -0.96
NEK3-209ENST00000618856 ZBTB6Q15916 424 aa9.03□□□□□ -0.96
NEK3-209ENST00000618856 KYAT1Q16773 422 aa9.03□□□□□ -0.96
NEK3-209ENST00000618856 SLC10A6Q3KNW5 377 aa9.03□□□□□ -0.96
NEK3-209ENST00000618856 L1TD1Q5T7N2 865 aaKnown RBP9.03□□□□□ -0.96
NEK3-209ENST00000618856 CD300LGQ6UXG3 332 aa9.03□□□□□ -0.96
NEK3-209ENST00000618856 TMEM184AQ6ZMB5 413 aa9.03□□□□□ -0.96
NEK3-209ENST00000618856 UNC13DQ70J99 1090 aa9.03□□□□□ -0.96
NEK3-209ENST00000618856 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.03□□□□□ -0.96
NEK3-209ENST00000618856 MRPL43Q8N983 215 aaKnown RBP9.03□□□□□ -0.96
NEK3-209ENST00000618856 TMEM174Q8WUU8 243 aa9.03□□□□□ -0.96
NEK3-209ENST00000618856 STAMQ92783 540 aa9.03□□□□□ -0.96
NEK3-209ENST00000618856 PABPC5Q96DU9 382 aaKnown RBP9.03□□□□□ -0.96
NEK3-209ENST00000618856 PAGE5Q96GU1 130 aa9.03□□□□□ -0.96
NEK3-209ENST00000618856 SNX27Q96L92 541 aa9.03□□□□□ -0.96
NEK3-209ENST00000618856 ZMAT2Q96NC0 199 aaKnown RBP9.03□□□□□ -0.96
NEK3-209ENST00000618856 APOL6Q9BWW8 343 aa9.03□□□□□ -0.96
NEK3-209ENST00000618856 FGFBP2Q9BYJ0 223 aa9.03□□□□□ -0.96
NEK3-209ENST00000618856 PLEKHA5Q9HAU0 1116 aa9.03□□□□□ -0.96
NEK3-209ENST00000618856 CHST7Q9NS84 486 aa9.03□□□□□ -0.96
NEK3-209ENST00000618856 PANK4Q9NVE7 773 aa9.03□□□□□ -0.96
NEK3-209ENST00000618856 KLK14Q9P0G3 267 aa9.03□□□□□ -0.96
NEK3-209ENST00000618856 PARP2Q9UGN5 583 aa9.03□□□□□ -0.96
NEK3-209ENST00000618856 PUF60Q9UHX1 559 aaKnown RBP9.03□□□□□ -0.96
NEK3-209ENST00000618856 CPSF3Q9UKF6 684 aaKnown RBP9.03□□□□□ -0.96
NEK3-209ENST00000618856 FAN1Q9Y2M0 1017 aa9.03□□□□□ -0.96
NEK3-209ENST00000618856 TDRD15B5MCY1 1934 aaKnown RBP9.02□□□□□ -0.97
NEK3-209ENST00000618856 BRWD1Q9NSI6 2320 aa9.02□□□□□ -0.97
NEK3-209ENST00000618856 TTC26A0AVF1 554 aa9.02□□□□□ -0.97
NEK3-209ENST00000618856 C2orf71A6NGG8 1288 aa9.02□□□□□ -0.97
NEK3-209ENST00000618856 HIDE1A8MVS5 230 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms