RNA–Protein interactions for RNA: ENST00000618516.4

SYCP1-210, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-210ENST00000618516 ATF7P17544 494 aaPredicted RBP5.03□□□□□ -1.6
SYCP1-210ENST00000618516 POSTNQ15063 836 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 TMEM119Q4V9L6 283 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 ZNF394Q53GI3 561 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 NT5DC1Q5TFE4 455 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 C1orf53Q5VUE5 145 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 TAS1R3Q7RTX0 852 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 CBWD2Q8IUF1 395 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 VPS52Q8N1B4 723 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 GPR152Q8TDT2 470 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 GBP4Q96PP9 640 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 MMS19Q96T76 1030 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 TCF25Q9BQ70 676 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 MRPL4Q9BYD3 311 aaKnown RBP5.03□□□□□ -1.6
SYCP1-210ENST00000618516 PDZD7Q9H5P4 517 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 TBC1D13Q9NVG8 400 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 NXF1Q9UBU9 619 aaKnown RBP5.03□□□□□ -1.6
SYCP1-210ENST00000618516 TUBGCP4Q9UGJ1 667 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 TBX20Q9UMR3 447 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 ZNF236Q9UL36 1845 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 A0A0U1RQF3 1178 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 C9IYK1 514 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 HCRTO43612 131 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 PHACTR2O75167 634 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 LRRN2O75325 713 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 PDIA4P13667 645 aaKnown RBP5.03□□□□□ -1.6
SYCP1-210ENST00000618516 CMA1P23946 247 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 NAMPTP43490 491 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 NRIP1P48552 1158 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 NUMBP49757 651 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 CLCNKBP51801 687 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 WNT7BP56706 349 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 AMPD3Q01432 767 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 PTPN11Q06124 597 aaPredicted RBP5.03□□□□□ -1.6
SYCP1-210ENST00000618516 TPD52L1Q16890 204 aaPredicted RBP5.03□□□□□ -1.6
SYCP1-210ENST00000618516 NOMO2Q5JPE7 1267 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 SLC27A1Q6PCB7 646 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 KCNT2Q6UVM3 1135 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 TMC5Q6UXY8 1006 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 KRBA2Q6ZNG9 492 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 LRRC55Q6ZSA7 311 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 TAS1R1Q7RTX1 841 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 NME8Q8N427 588 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 HERVK_113Q902F9 699 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 SMARCE1Q969G3 411 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 CRACR2AQ9BSW2 395 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 CCDC94Q9BW85 323 aaPredicted RBP5.03□□□□□ -1.6
SYCP1-210ENST00000618516 CCSER1Q9C0I3 900 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 TSPYL2Q9H2G4 693 aaPredicted RBP5.03□□□□□ -1.6
SYCP1-210ENST00000618516 TNMDQ9H2S6 317 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 BARX2Q9UMQ3 279 aaPredicted RBP5.03□□□□□ -1.6
SYCP1-210ENST00000618516 IGKV6-21A0A0C4DH24 114 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 ACKR2O00590 384 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 SOAT2O75908 522 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 FGF18O76093 207 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 RPN1P04843 607 aaKnown RBP5.03□□□□□ -1.6
SYCP1-210ENST00000618516 NFICP08651 508 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 SLFN14P0C7P3 912 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 ACAT1P24752 427 aaKnown RBP5.03□□□□□ -1.6
SYCP1-210ENST00000618516 DNAJB1P25685 340 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 MCM4P33991 863 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 NDUFV1P49821 464 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 KCNQ1P51787 676 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 NOLC1Q14978 699 aaKnown RBP eCLIP5.03□□□□□ -1.6
SYCP1-210ENST00000618516 FAM171A1Q5VUB5 890 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 ADGRD2Q7Z7M1 963 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 SMG8Q8ND04 991 aaKnown RBP5.03□□□□□ -1.6
SYCP1-210ENST00000618516 SLC17A8Q8NDX2 589 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 DNAJC19Q96DA6 116 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 ZMAT2Q96NC0 199 aaKnown RBP5.03□□□□□ -1.6
SYCP1-210ENST00000618516 ACAP3Q96P50 834 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 PI4K2AQ9BTU6 479 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 HAPLN2Q9GZV7 340 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 PRMT7Q9NVM4 692 aaPredicted RBP5.03□□□□□ -1.6
SYCP1-210ENST00000618516 DBR1Q9UK59 544 aaKnown RBP5.03□□□□□ -1.6
SYCP1-210ENST00000618516 AGO2Q9UKV8 859 aaKnown RBP5.03□□□□□ -1.6
SYCP1-210ENST00000618516 CTNND2Q9UQB3 1225 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 FAN1Q9Y2M0 1017 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 FARP1Q9Y4F1 1045 aaPredicted RBP5.03□□□□□ -1.6
SYCP1-210ENST00000618516 PCDHB12Q9Y5F1 795 aa5.03□□□□□ -1.6
SYCP1-210ENST00000618516 WDFY3Q8IZQ1 3526 aa5.02□□□□□ -1.61
SYCP1-210ENST00000618516 DOCK6Q96HP0 2047 aa5.02□□□□□ -1.61
SYCP1-210ENST00000618516 RBBP6Q7Z6E9 1792 aaKnown RBP5.02□□□□□ -1.61
SYCP1-210ENST00000618516 TCF20Q9UGU0 1960 aaKnown RBP5.02□□□□□ -1.61
SYCP1-210ENST00000618516 LINC01565O15544 149 aa5.02□□□□□ -1.61
SYCP1-210ENST00000618516 ACTN4O43707 911 aaKnown RBP5.02□□□□□ -1.61
SYCP1-210ENST00000618516 DGKIO75912 1065 aa5.02□□□□□ -1.61
SYCP1-210ENST00000618516 SLC11A1P49279 550 aa5.02□□□□□ -1.61
SYCP1-210ENST00000618516 ERVFC1P60507 584 aa5.02□□□□□ -1.61
SYCP1-210ENST00000618516 FAM160A1Q05DH4 1040 aa5.02□□□□□ -1.61
SYCP1-210ENST00000618516 SOX4Q06945 474 aaPredicted RBP5.02□□□□□ -1.61
SYCP1-210ENST00000618516 HS2ST1Q7LGA3 356 aa5.02□□□□□ -1.61
SYCP1-210ENST00000618516 ZNF410Q86VK4 478 aa5.02□□□□□ -1.61
SYCP1-210ENST00000618516 NPAS4Q8IUM7 802 aa5.02□□□□□ -1.61
SYCP1-210ENST00000618516 MAFAQ8NHW3 353 aaPredicted RBP5.02□□□□□ -1.61
SYCP1-210ENST00000618516 URGCPQ8TCY9 931 aa5.02□□□□□ -1.61
SYCP1-210ENST00000618516 RIN2Q8WYP3 895 aaPredicted RBP5.02□□□□□ -1.61
SYCP1-210ENST00000618516 TGS1Q96RS0 853 aaKnown RBP5.02□□□□□ -1.61
SYCP1-210ENST00000618516 FNBP1Q96RU3 617 aa5.02□□□□□ -1.61
SYCP1-210ENST00000618516 MTMR12Q9C0I1 747 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms