RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 KRT77Q7Z794 578 aa12.98□□□□□ -0.33
SRRT-216ENST00000618262 TLK2Q86UE8 772 aa12.98□□□□□ -0.33
SRRT-216ENST00000618262 SMYD4Q8IYR2 804 aaPredicted RBP12.98□□□□□ -0.33
SRRT-216ENST00000618262 FMR1NBQ8N0W7 255 aaPredicted RBP12.98□□□□□ -0.33
SRRT-216ENST00000618262 GPRASP2Q96D09 838 aa12.98□□□□□ -0.33
SRRT-216ENST00000618262 EEF2KMTQ96G04 330 aa12.98□□□□□ -0.33
SRRT-216ENST00000618262 SMNDC1O75940 238 aaKnown RBP eCLIP12.98□□□□□ -0.332e-6■□□□□ 9.4
SRRT-216ENST00000618262 IDEP14735 1019 aa12.98□□□□□ -0.33
SRRT-216ENST00000618262 GRK4P32298 578 aa12.98□□□□□ -0.33
SRRT-216ENST00000618262 LONP1P36776 959 aaKnown RBP12.98□□□□□ -0.33
SRRT-216ENST00000618262 SLC9C1Q4G0N8 1177 aa12.98□□□□□ -0.33
SRRT-216ENST00000618262 SPDYCQ5MJ68 293 aa12.98□□□□□ -0.33
SRRT-216ENST00000618262 MFSD14CQ5VZR4 134 aa12.98□□□□□ -0.33
SRRT-216ENST00000618262 PDXDC2PQ6P474 469 aa12.98□□□□□ -0.33
SRRT-216ENST00000618262 CCDC62Q6P9F0 684 aa12.98□□□□□ -0.33
SRRT-216ENST00000618262 MAMDC4Q6UXC1 1216 aa12.98□□□□□ -0.33
SRRT-216ENST00000618262 BPHLQ86WA6 291 aaPredicted RBP12.98□□□□□ -0.33
SRRT-216ENST00000618262 PPP1R14BQ96C90 147 aa12.98□□□□□ -0.33
SRRT-216ENST00000618262 RAB34Q9BZG1 259 aa12.98□□□□□ -0.33
SRRT-216ENST00000618262 ZCWPW1Q9H0M4 648 aa12.98□□□□□ -0.33
SRRT-216ENST00000618262 SLC30A1Q9Y6M5 507 aa12.98□□□□□ -0.33
SRRT-216ENST00000618262 ZNF862O60290 1169 aa12.97□□□□□ -0.33
SRRT-216ENST00000618262 BMP15O95972 392 aa12.97□□□□□ -0.33
SRRT-216ENST00000618262 TCF3P15923 654 aa12.97□□□□□ -0.33
SRRT-216ENST00000618262 FUT4P22083 530 aa12.97□□□□□ -0.33
SRRT-216ENST00000618262 CTAG1AP78358 180 aa12.97□□□□□ -0.33
SRRT-216ENST00000618262 NAALADL2Q58DX5 795 aa12.97□□□□□ -0.33
SRRT-216ENST00000618262 GNASQ5JWF2 1037 aa12.97□□□□□ -0.33
SRRT-216ENST00000618262 SLC15A3Q8IY34 581 aa12.97□□□□□ -0.33
SRRT-216ENST00000618262 REM2Q8IYK8 340 aaPredicted RBP12.97□□□□□ -0.33
SRRT-216ENST00000618262 HS6ST3Q8IZP7 471 aa12.97□□□□□ -0.33
SRRT-216ENST00000618262 CALML4Q96GE6 196 aa12.97□□□□□ -0.33
SRRT-216ENST00000618262 LUC7LQ9NQ29 371 aaKnown RBP12.97□□□□□ -0.33
SRRT-216ENST00000618262 KMT5AQ9NQR1 393 aa12.97□□□□□ -0.33
SRRT-216ENST00000618262 SEPT9Q9UHD8 586 aaPredicted RBP12.97□□□□□ -0.33
SRRT-216ENST00000618262 KIAA1217Q5T5P2 1943 aa12.97□□□□□ -0.33
SRRT-216ENST00000618262 B4DLN1 442 aa12.97□□□□□ -0.33
SRRT-216ENST00000618262 GFPT2O94808 682 aa12.97□□□□□ -0.33
SRRT-216ENST00000618262 MYL3P08590 195 aa12.97□□□□□ -0.33
SRRT-216ENST00000618262 SLC8A1P32418 973 aa12.97□□□□□ -0.33
SRRT-216ENST00000618262 FXR2P51116 673 aaKnown RBP eCLIP12.97□□□□□ -0.335e-10■■■□□ 17.2
SRRT-216ENST00000618262 PSMD7P51665 324 aa12.97□□□□□ -0.33
SRRT-216ENST00000618262 LBRQ14739 615 aaKnown RBP12.97□□□□□ -0.33
SRRT-216ENST00000618262 SNCBQ16143 134 aa12.97□□□□□ -0.33
SRRT-216ENST00000618262 MTERF2Q49AM1 385 aa12.97□□□□□ -0.33
SRRT-216ENST00000618262 SH2D4BQ5SQS7 431 aa12.97□□□□□ -0.33
SRRT-216ENST00000618262 CELF3Q5SZQ8 465 aaKnown RBP12.97□□□□□ -0.33
SRRT-216ENST00000618262 CXCL17Q6UXB2 119 aa12.97□□□□□ -0.33
SRRT-216ENST00000618262 CCDC121Q6ZUS5 278 aa12.97□□□□□ -0.33
SRRT-216ENST00000618262 TMEM87AQ8NBN3 555 aa12.97□□□□□ -0.33
SRRT-216ENST00000618262 ACAD8Q9UKU7 415 aa12.97□□□□□ -0.33
SRRT-216ENST00000618262 GSTTP1A0A1W2PQM5 241 aa12.96□□□□□ -0.33
SRRT-216ENST00000618262 NDUFAB1O14561 156 aa12.96□□□□□ -0.33
SRRT-216ENST00000618262 AP5Z1O43299 807 aa12.96□□□□□ -0.33
SRRT-216ENST00000618262 CBX3Q13185 183 aa12.96□□□□□ -0.33
SRRT-216ENST00000618262 HELQQ8TDG4 1101 aa12.96□□□□□ -0.33
SRRT-216ENST00000618262 HVCN1Q96D96 273 aa12.96□□□□□ -0.33
SRRT-216ENST00000618262 CCDC43Q96MW1 224 aaKnown RBP12.96□□□□□ -0.33
SRRT-216ENST00000618262 RNPEPQ9H4A4 650 aa12.96□□□□□ -0.33
SRRT-216ENST00000618262 GPRC5CQ9NQ84 441 aa12.96□□□□□ -0.33
SRRT-216ENST00000618262 TBC1D22BQ9NU19 505 aa12.96□□□□□ -0.33
SRRT-216ENST00000618262 GINS2Q9Y248 185 aa12.96□□□□□ -0.33
SRRT-216ENST00000618262 PCDHA10Q9Y5I2 948 aa12.96□□□□□ -0.33
SRRT-216ENST00000618262 WDR64B1ANS9 1081 aa12.96□□□□□ -0.33
SRRT-216ENST00000618262 GJB1P08034 283 aa12.96□□□□□ -0.33
SRRT-216ENST00000618262 ARHGAP1Q07960 439 aa12.96□□□□□ -0.33
SRRT-216ENST00000618262 MUM1Q2TAK8 710 aa12.96□□□□□ -0.33
SRRT-216ENST00000618262 NCCRP1Q6ZVX7 275 aaPredicted RBP12.96□□□□□ -0.33
SRRT-216ENST00000618262 TMEM151BQ8IW70 566 aa12.96□□□□□ -0.33
SRRT-216ENST00000618262 ENGASEQ8NFI3 743 aa12.96□□□□□ -0.33
SRRT-216ENST00000618262 NAP1L3Q99457 506 aaPredicted RBP12.96□□□□□ -0.33
SRRT-216ENST00000618262 RNF208Q9H0X6 261 aa12.96□□□□□ -0.33
SRRT-216ENST00000618262 UNC93B1Q9H1C4 597 aa12.96□□□□□ -0.33
SRRT-216ENST00000618262 A0A1B0GVG6 124 aa12.96□□□□□ -0.34
SRRT-216ENST00000618262 RSPH10B2B2RC85 870 aa12.96□□□□□ -0.34
SRRT-216ENST00000618262 LAD1O00515 517 aa12.96□□□□□ -0.34
SRRT-216ENST00000618262 USO1O60763 962 aaKnown RBP12.96□□□□□ -0.34
SRRT-216ENST00000618262 HOXC6P09630 235 aa12.96□□□□□ -0.34
SRRT-216ENST00000618262 RSPH10BP0C881 870 aa12.96□□□□□ -0.34
SRRT-216ENST00000618262 SEPT7Q16181 437 aaKnown RBP12.96□□□□□ -0.34
SRRT-216ENST00000618262 HSP90AA4PQ58FG1 418 aa12.96□□□□□ -0.34
SRRT-216ENST00000618262 MOXD1Q6UVY6 613 aa12.96□□□□□ -0.34
SRRT-216ENST00000618262 LRRN4CLQ8ND94 238 aa12.96□□□□□ -0.34
SRRT-216ENST00000618262 DEFB118Q96PH6 123 aa12.96□□□□□ -0.34
SRRT-216ENST00000618262 GPR20Q99678 358 aa12.96□□□□□ -0.34
SRRT-216ENST00000618262 NAP1L4Q99733 375 aaKnown RBP12.96□□□□□ -0.34
SRRT-216ENST00000618262 OXCT2Q9BYC2 517 aaPredicted RBP12.96□□□□□ -0.34
SRRT-216ENST00000618262 NUP62CLQ9H1M0 184 aa12.96□□□□□ -0.34
SRRT-216ENST00000618262 SUGCTQ9HAC7 445 aa12.96□□□□□ -0.34
SRRT-216ENST00000618262 PHF24Q9UPV7 400 aa12.96□□□□□ -0.34
SRRT-216ENST00000618262 TRPC6Q9Y210 931 aa12.96□□□□□ -0.34
SRRT-216ENST00000618262 USP20Q9Y2K6 914 aa12.96□□□□□ -0.34
SRRT-216ENST00000618262 PLXNA1Q9UIW2 1896 aa12.95□□□□□ -0.34
SRRT-216ENST00000618262 MYH15Q9Y2K3 1946 aa12.95□□□□□ -0.34
SRRT-216ENST00000618262 KRT18P05783 430 aaKnown RBP12.95□□□□□ -0.34
SRRT-216ENST00000618262 CCNCP24863 283 aa12.95□□□□□ -0.34
SRRT-216ENST00000618262 CCT5P48643 541 aa12.95□□□□□ -0.34
SRRT-216ENST00000618262 SKIDA1Q1XH10 827 aa12.95□□□□□ -0.34
SRRT-216ENST00000618262 METTL7BQ6UX53 244 aa12.95□□□□□ -0.34
SRRT-216ENST00000618262 BZW1Q7L1Q6 419 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms