RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 TRIM16LQ309B1 348 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 C16orf62Q7Z3J2 963 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 SFR1Q86XK3 245 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 URGCPQ8TCY9 931 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 ELMO2Q96JJ3 720 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 FOPNLQ96NB1 174 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 POLD4Q9HCU8 107 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 CDH6P55285 790 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 PPP4R3CPQ6ZMV5 832 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 PGBD3Q8N328 593 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 PGBD4Q96DM1 585 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 CCDC17Q96LX7 622 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 FAM129AQ9BZQ8 928 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 FANCAO15360 1455 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 CYP2D7A0A087X1C5 515 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 POTEMA6NI47 508 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 TCP11X1B4DZS4 312 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 HNRNPRO43390 633 aaKnown RBP6.33□□□□□ -1.4
RFX3-212ENST00000617270 FLT3P36888 993 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 ATP12AP54707 1039 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 CNKSR1Q969H4 720 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 GREM2Q9H772 168 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 PLEKHA5Q9HAU0 1116 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 DOLKQ9UPQ8 538 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 APOL1O14791 398 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 RAD17O75943 681 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 ALDH6A1Q02252 535 aaKnown RBP6.33□□□□□ -1.4
RFX3-212ENST00000617270 BNIPLQ7Z465 357 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 NSUN7Q8NE18 718 aaKnown RBP6.33□□□□□ -1.4
RFX3-212ENST00000617270 COQ7Q99807 217 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 ZNF341Q9BYN7 854 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 TRABDQ9H4I3 376 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 USP21Q9UK80 565 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 MRC2Q9UBG0 1479 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 USP17L3A6NCW0 530 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 USP17L4A6NCW7 530 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 AIM2O14862 343 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 SERPINB4P48594 390 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 ARSEP51690 589 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 ARID5BQ14865 1188 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 C16orf72Q14CZ0 275 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 USPL1Q5W0Q7 1092 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 BTBD8Q5XKL5 378 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 C11orf88Q6PI97 169 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 KLHL24Q6TFL4 600 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 USP17L1Q7RTZ2 530 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 SPATA21Q7Z572 469 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 LCORLQ8N3X6 602 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 SIKE1Q9BRV8 207 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 CD274Q9NZQ7 290 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 PKP3Q9Y446 797 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 TNFAIP2Q03169 654 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 MFSD4BQ5TF39 518 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 SLC30A9Q6PML9 568 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 CHSY1Q86X52 802 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 CCDC60Q8IWA6 550 aaPredicted RBP6.33□□□□□ -1.4
RFX3-212ENST00000617270 HES6Q96HZ4 224 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 BABAM1Q9NWV8 329 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 TJP2Q9UDY2 1190 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 ZC3H7BQ9UGR2 993 aaKnown RBP6.33□□□□□ -1.4
RFX3-212ENST00000617270 CFAP73A6NFT4 308 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 DDHD2O94830 711 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 LDHAP00338 332 aaKnown RBP6.33□□□□□ -1.4
RFX3-212ENST00000617270 GNA15P30679 374 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 IREB2P48200 963 aaKnown RBP6.33□□□□□ -1.4
RFX3-212ENST00000617270 JAK3P52333 1124 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 PSMC5P62195 406 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 CCDC137Q6PK04 289 aaKnown RBP6.33□□□□□ -1.4
RFX3-212ENST00000617270 P3H2Q8IVL5 708 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 BEST2Q8NFU1 509 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 CYFIP2Q96F07 1278 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 CARD9Q9H257 536 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 LOC102724159A0A0B4J2E5 919 aa6.32□□□□□ -1.4
RFX3-212ENST00000617270 CHL1O00533 1208 aa6.32□□□□□ -1.4
RFX3-212ENST00000617270 CAND2O75155 1236 aa6.32□□□□□ -1.4
RFX3-212ENST00000617270 ATP6V1B1P15313 513 aa6.32□□□□□ -1.4
RFX3-212ENST00000617270 ACTR2P61160 394 aa6.32□□□□□ -1.4
RFX3-212ENST00000617270 PWP2Q15269 919 aaKnown RBP6.32□□□□□ -1.4
RFX3-212ENST00000617270 ZNF589Q86UQ0 364 aaPredicted RBP6.32□□□□□ -1.4
RFX3-212ENST00000617270 IFNLR1Q8IU57 520 aaPredicted RBP6.32□□□□□ -1.4
RFX3-212ENST00000617270 MIER2Q8N344 545 aa6.32□□□□□ -1.4
RFX3-212ENST00000617270 OMA1Q96E52 524 aa6.32□□□□□ -1.4
RFX3-212ENST00000617270 PUS3Q9BZE2 481 aaKnown RBP6.32□□□□□ -1.4
RFX3-212ENST00000617270 CCDC134Q9H6E4 229 aa6.32□□□□□ -1.4
RFX3-212ENST00000617270 MAN1C1Q9NR34 630 aa6.32□□□□□ -1.4
RFX3-212ENST00000617270 PCMTD2Q9NV79 361 aa6.32□□□□□ -1.4
RFX3-212ENST00000617270 TLR7Q9NYK1 1049 aaKnown RBP6.32□□□□□ -1.4
RFX3-212ENST00000617270 LCMT1Q9UIC8 334 aa6.32□□□□□ -1.4
RFX3-212ENST00000617270 ZC3H4Q9UPT8 1303 aaKnown RBP6.32□□□□□ -1.4
RFX3-212ENST00000617270 TRIM13O60858 407 aa6.32□□□□□ -1.4
RFX3-212ENST00000617270 CDC27P30260 824 aa6.32□□□□□ -1.4
RFX3-212ENST00000617270 PSMC6P62333 389 aa6.32□□□□□ -1.4
RFX3-212ENST00000617270 CYLC2Q14093 348 aaPredicted RBP6.32□□□□□ -1.4
RFX3-212ENST00000617270 SUPT20HL1Q3ZLR7 823 aa6.32□□□□□ -1.4
RFX3-212ENST00000617270 USP39Q53GS9 565 aaKnown RBP6.32□□□□□ -1.4
RFX3-212ENST00000617270 DGKHQ86XP1 1220 aa6.32□□□□□ -1.4
RFX3-212ENST00000617270 LINC00301Q8NCQ3 95 aa6.32□□□□□ -1.4
RFX3-212ENST00000617270 WNK4Q96J92 1243 aa6.32□□□□□ -1.4
RFX3-212ENST00000617270 USP17L8P0C7I0 530 aa6.32□□□□□ -1.4
RFX3-212ENST00000617270 PCP11498 1178 aaKnown RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms