RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 PRPF4BQ13523 1007 aaKnown RBP3.58□□□□□ -1.84
LPP-220ENST00000617246 KYNUQ16719 465 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 FAM46CQ5VWP2 391 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 MMS22LQ6ZRQ5 1243 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 BORCS6Q96GS4 357 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 NCKIPSDQ9NZQ3 722 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 TRPM5Q9NZQ8 1165 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 ZNF70Q9UC06 446 aaPredicted RBP3.58□□□□□ -1.84
LPP-220ENST00000617246 INSL6Q9Y581 213 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 EXOC3O60645 756 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 CDC37Q16543 378 aaPredicted RBP3.58□□□□□ -1.84
LPP-220ENST00000617246 MDH1BQ5I0G3 518 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 ZNF484Q5JVG2 852 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 GRK7Q8WTQ7 553 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.58□□□□□ -1.842e-6■■■■■ 57
LPP-220ENST00000617246 EXOC6BQ9Y2D4 811 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 UBE2Q2LH0YL09 131 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 C6P13671 934 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 IL1RL1Q01638 556 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 UBL4BQ8N7F7 174 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 CEP63Q96MT8 703 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 PRRG4Q9BZD6 226 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 DDX20Q9UHI6 824 aaKnown RBP3.58□□□□□ -1.84
LPP-220ENST00000617246 SLC15A5A6NIM6 579 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 RRP9O43818 475 aaKnown RBP3.58□□□□□ -1.84
LPP-220ENST00000617246 DGKEP52429 567 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 CDH18Q13634 790 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 ZNF784Q8NCA9 323 aaPredicted RBP3.58□□□□□ -1.84
LPP-220ENST00000617246 TNMDQ9H2S6 317 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 TAF1DQ9H5J8 278 aaPredicted RBP3.58□□□□□ -1.84
LPP-220ENST00000617246 GPRC5CQ9NQ84 441 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 UTYO14607 1347 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 CEMIPQ8WUJ3 1361 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 H0Y626 953 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 DYNC1LI2O43237 492 aaPredicted RBP3.58□□□□□ -1.84
LPP-220ENST00000617246 ESRRBO95718 433 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 DNAJB2P25686 324 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 AXLP30530 894 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 CAPZA2P47755 286 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 TFAP4Q01664 338 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 CDCA3Q99618 268 aaPredicted RBP3.58□□□□□ -1.84
LPP-220ENST00000617246 NMRK2Q9NPI5 230 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 TMEM260Q9NX78 707 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 SLC9A2Q9UBY0 812 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 BRPF3Q9ULD4 1205 aa3.58□□□□□ -1.84
LPP-220ENST00000617246 RTN3O95197 1032 aaPredicted RBP3.57□□□□□ -1.84
LPP-220ENST00000617246 INHAP05111 366 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 RANBP1P43487 201 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 ARRB1P49407 418 aaPredicted RBP3.57□□□□□ -1.84
LPP-220ENST00000617246 ITGADQ13349 1161 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 TOMM20Q15388 145 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 SH2D4BQ5SQS7 431 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 LGSNQ5TDP6 509 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 TSTD1Q8NFU3 115 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 UHRF1Q96T88 793 aaPredicted RBP3.57□□□□□ -1.84
LPP-220ENST00000617246 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.57□□□□□ -1.84
LPP-220ENST00000617246 THSD7AQ9UPZ6 1657 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 SMIM22K7EJ46 135 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 SPTLC2O15270 562 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 NEMFO60524 1076 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 SYF2O95926 243 aaKnown RBP3.57□□□□□ -1.84
LPP-220ENST00000617246 UQCRBP14927 111 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 ADSLP30566 484 aaPredicted RBP3.57□□□□□ -1.84
LPP-220ENST00000617246 THEMIS2Q5TEJ8 643 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 CEP70Q8NHQ1 597 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 UBLCP1Q8WVY7 318 aaPredicted RBP3.57□□□□□ -1.84
LPP-220ENST00000617246 DCUN1D1Q96GG9 259 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 NSRP1Q9H0G5 558 aaKnown RBP3.57□□□□□ -1.84
LPP-220ENST00000617246 CD209Q9NNX6 404 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 TSKSQ9UJT2 592 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 RAD54BQ9Y620 910 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 GPR75-ASB3A0A0A6YYF3 556 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 A0A1W2PPC1 479 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 ALPPP05187 535 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 NCALDP61601 193 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 C2orf27AQ580R0 203 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 ZNF667Q5HYK9 610 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 COL23A1Q86Y22 540 aaPredicted RBP3.57□□□□□ -1.84
LPP-220ENST00000617246 MFN1Q8IWA4 741 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 FAM178BQ8IXR5 827 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.57□□□□□ -1.84
LPP-220ENST00000617246 L3MBTL3Q96JM7 780 aaPredicted RBP3.57□□□□□ -1.84
LPP-220ENST00000617246 NSUN3Q9H649 340 aaKnown RBP3.57□□□□□ -1.84
LPP-220ENST00000617246 ASB3Q9Y575 518 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 POLR2AP24928 1970 aaKnown RBP3.57□□□□□ -1.84
LPP-220ENST00000617246 ZNF609O15014 1411 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 MMP3P08254 477 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 CYLC1P35663 651 aaPredicted RBP3.57□□□□□ -1.84
LPP-220ENST00000617246 PTPN11Q06124 597 aaPredicted RBP3.57□□□□□ -1.84
LPP-220ENST00000617246 MTHFSDQ2M296 383 aaKnown RBP3.57□□□□□ -1.84
LPP-220ENST00000617246 PRR23CQ6ZRP0 262 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 USB1Q9BQ65 265 aaKnown RBP3.57□□□□□ -1.84
LPP-220ENST00000617246 SSC5DA1L4H1 1573 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 KLHL18O94889 574 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 ATP5BP06576 529 aaKnown RBP3.57□□□□□ -1.84
LPP-220ENST00000617246 MAPK9P45984 424 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 HERVK_113P62684 666 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 ARHGAP8P85298 464 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 YWHAHQ04917 246 aaPredicted RBP3.57□□□□□ -1.84
LPP-220ENST00000617246 TCHHL1Q5QJ38 904 aaPredicted RBP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms