RNA–Protein interactions for RNA: ENST00000613928.1

CCL3-205, Transcript of C-C motif chemokine ligand 3, humanhuman

TSL 5

Gene CCL3, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-205ENST00000613928 RASAL3Q86YV0 1011 aa9.34□□□□□ -0.91
CCL3-205ENST00000613928 SMG8Q8ND04 991 aaKnown RBP9.34□□□□□ -0.91
CCL3-205ENST00000613928 IL31RAQ8NI17 732 aa9.34□□□□□ -0.91
CCL3-205ENST00000613928 NELFBQ8WX92 580 aa9.34□□□□□ -0.91
CCL3-205ENST00000613928 WDR89Q96FK6 387 aaPredicted RBP9.34□□□□□ -0.91
CCL3-205ENST00000613928 MXRA8Q9BRK3 442 aa9.34□□□□□ -0.91
CCL3-205ENST00000613928 NT5C3AQ9H0P0 336 aa9.34□□□□□ -0.91
CCL3-205ENST00000613928 HOMER2Q9NSB8 354 aa9.34□□□□□ -0.91
CCL3-205ENST00000613928 RNF146Q9NTX7 359 aa9.34□□□□□ -0.91
CCL3-205ENST00000613928 INTS13Q9NVM9 706 aa9.34□□□□□ -0.91
CCL3-205ENST00000613928 MAP3K20Q9NYL2 800 aaKnown RBP9.34□□□□□ -0.91
CCL3-205ENST00000613928 UBP1Q9NZI7 540 aa9.34□□□□□ -0.91
CCL3-205ENST00000613928 RWDD2AQ9UIY3 292 aa9.34□□□□□ -0.91
CCL3-205ENST00000613928 PNMA2Q9UL42 364 aa9.34□□□□□ -0.91
CCL3-205ENST00000613928 ZNF214Q9UL59 606 aaPredicted RBP9.34□□□□□ -0.91
CCL3-205ENST00000613928 MAPK8IP1Q9UQF2 711 aa9.34□□□□□ -0.91
CCL3-205ENST00000613928 RABGAP1Q9Y3P9 1069 aa9.34□□□□□ -0.91
CCL3-205ENST00000613928 CTDP1Q9Y5B0 961 aaPredicted RBP9.34□□□□□ -0.91
CCL3-205ENST00000613928 COL11A1P12107 1806 aaPredicted RBP9.33□□□□□ -0.92
CCL3-205ENST00000613928 RBBP6Q7Z6E9 1792 aaKnown RBP9.33□□□□□ -0.92
CCL3-205ENST00000613928 PVALEFA0A1B0GWK0 134 aa9.33□□□□□ -0.92
CCL3-205ENST00000613928 ATP2A1O14983 1001 aa9.33□□□□□ -0.92
CCL3-205ENST00000613928 CBFA2T2O43439 604 aa9.33□□□□□ -0.92
CCL3-205ENST00000613928 ZNF500O60304 480 aaPredicted RBP9.33□□□□□ -0.92
CCL3-205ENST00000613928 SERPINC1P01008 464 aa9.33□□□□□ -0.92
CCL3-205ENST00000613928 PLA2G4BP0C869 781 aa9.33□□□□□ -0.92
CCL3-205ENST00000613928 FCER1AP12319 257 aa9.33□□□□□ -0.92
CCL3-205ENST00000613928 ITGB5P18084 799 aa9.33□□□□□ -0.92
CCL3-205ENST00000613928 MSNP26038 577 aaKnown RBP9.33□□□□□ -0.92
CCL3-205ENST00000613928 IREB2P48200 963 aaKnown RBP9.33□□□□□ -0.92
CCL3-205ENST00000613928 UBASH3AP57075 661 aa9.33□□□□□ -0.92
CCL3-205ENST00000613928 RPS6P62753 249 aaKnown RBP9.33□□□□□ -0.92
CCL3-205ENST00000613928 MRPS9P82933 396 aaKnown RBP9.33□□□□□ -0.92
CCL3-205ENST00000613928 ID3Q02535 119 aa9.33□□□□□ -0.92
CCL3-205ENST00000613928 STK4Q13043 487 aa9.33□□□□□ -0.92
CCL3-205ENST00000613928 PAK1Q13153 545 aa9.33□□□□□ -0.92
CCL3-205ENST00000613928 TMEM132BQ14DG7 1078 aa9.33□□□□□ -0.92
CCL3-205ENST00000613928 TREML2Q5T2D2 321 aa9.33□□□□□ -0.92
CCL3-205ENST00000613928 B3GNT9Q6UX72 402 aa9.33□□□□□ -0.92
CCL3-205ENST00000613928 RNF207Q6ZRF8 634 aa9.33□□□□□ -0.92
CCL3-205ENST00000613928 UNC13DQ70J99 1090 aa9.33□□□□□ -0.92
CCL3-205ENST00000613928 OTOP1Q7RTM1 612 aa9.33□□□□□ -0.92
CCL3-205ENST00000613928 DYMQ7RTS9 669 aa9.33□□□□□ -0.92
CCL3-205ENST00000613928 TMC6Q7Z403 805 aa9.33□□□□□ -0.92
CCL3-205ENST00000613928 ERMNQ8TAM6 284 aa9.33□□□□□ -0.92
CCL3-205ENST00000613928 CACTINQ8WUQ7 758 aaKnown RBP9.33□□□□□ -0.92
CCL3-205ENST00000613928 HPS3Q969F9 1004 aa9.33□□□□□ -0.92
CCL3-205ENST00000613928 ELMO3Q96BJ8 720 aa9.33□□□□□ -0.92
CCL3-205ENST00000613928 DNAJC19Q96DA6 116 aa9.33□□□□□ -0.92
CCL3-205ENST00000613928 CLMNQ96JQ2 1002 aa9.33□□□□□ -0.92
CCL3-205ENST00000613928 POLR3CQ9BUI4 534 aaPredicted RBP9.33□□□□□ -0.92
CCL3-205ENST00000613928 CEP41Q9BYV8 373 aa9.33□□□□□ -0.92
CCL3-205ENST00000613928 LRRC27Q9C0I9 530 aa9.33□□□□□ -0.92
CCL3-205ENST00000613928 EXOC1Q9NV70 894 aa9.33□□□□□ -0.92
CCL3-205ENST00000613928 PYCARDQ9ULZ3 195 aa9.33□□□□□ -0.92
CCL3-205ENST00000613928 UBIAD1Q9Y5Z9 338 aa9.33□□□□□ -0.92
CCL3-205ENST00000613928 CSADQ9Y600 493 aa9.33□□□□□ -0.92
CCL3-205ENST00000613928 MYPNQ86TC9 1320 aa9.32□□□□□ -0.92
CCL3-205ENST00000613928 TRIM49BA6NDI0 452 aa9.32□□□□□ -0.92
CCL3-205ENST00000613928 TBC1D8O95759 1140 aa9.32□□□□□ -0.92
CCL3-205ENST00000613928 CYP11B2P19099 503 aa9.32□□□□□ -0.92
CCL3-205ENST00000613928 CDK11BP21127 795 aaKnown RBP9.32□□□□□ -0.92
CCL3-205ENST00000613928 RPA1P27694 616 aa9.32□□□□□ -0.92
CCL3-205ENST00000613928 PMS1P54277 932 aaKnown RBP9.32□□□□□ -0.92
CCL3-205ENST00000613928 SLC12A3P55017 1021 aa9.32□□□□□ -0.92
CCL3-205ENST00000613928 PSMC6P62333 389 aa9.32□□□□□ -0.92
CCL3-205ENST00000613928 SETQ01105 290 aaPredicted RBP9.32□□□□□ -0.92
CCL3-205ENST00000613928 PPATQ06203 517 aa9.32□□□□□ -0.92
CCL3-205ENST00000613928 LRMPQ12912 555 aa9.32□□□□□ -0.92
CCL3-205ENST00000613928 PPP2R5CQ13362 524 aa9.32□□□□□ -0.92
CCL3-205ENST00000613928 BAATQ14032 418 aaPredicted RBP9.32□□□□□ -0.92
CCL3-205ENST00000613928 COL9A2Q14055 689 aaPredicted RBP9.32□□□□□ -0.92
CCL3-205ENST00000613928 NR1I3Q14994 352 aa9.32□□□□□ -0.92
CCL3-205ENST00000613928 PGM5Q15124 567 aa9.32□□□□□ -0.92
CCL3-205ENST00000613928 COBLL1Q53SF7 1204 aa9.32□□□□□ -0.92
CCL3-205ENST00000613928 ZC3H12AQ5D1E8 599 aaKnown RBP9.32□□□□□ -0.92
CCL3-205ENST00000613928 WIPI1Q5MNZ9 446 aaPredicted RBP9.32□□□□□ -0.92
CCL3-205ENST00000613928 LRCH2Q5VUJ6 765 aa9.32□□□□□ -0.92
CCL3-205ENST00000613928 HAUS3Q68CZ6 603 aa9.32□□□□□ -0.92
CCL3-205ENST00000613928 SNRNP48Q6IEG0 339 aaKnown RBP9.32□□□□□ -0.92
CCL3-205ENST00000613928 NSMFQ6X4W1 530 aa9.32□□□□□ -0.92
CCL3-205ENST00000613928 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.32□□□□□ -0.92
CCL3-205ENST00000613928 NIPA1Q7RTP0 329 aa9.32□□□□□ -0.92
CCL3-205ENST00000613928 FILIP1Q7Z7B0 1213 aa9.32□□□□□ -0.92
CCL3-205ENST00000613928 VSTM4Q8IW00 320 aa9.32□□□□□ -0.92
CCL3-205ENST00000613928 AGGF1Q8N302 714 aaeCLIP9.32□□□□□ -0.92
CCL3-205ENST00000613928 KIAA0895Q8NCT3 520 aa9.32□□□□□ -0.92
CCL3-205ENST00000613928 NKD1Q969G9 470 aa9.32□□□□□ -0.92
CCL3-205ENST00000613928 CCDC47Q96A33 483 aaKnown RBP9.32□□□□□ -0.92
CCL3-205ENST00000613928 DHTKD1Q96HY7 919 aaPredicted RBP9.32□□□□□ -0.92
CCL3-205ENST00000613928 HSD17B14Q9BPX1 270 aa9.32□□□□□ -0.92
CCL3-205ENST00000613928 EIF2AK1Q9BQI3 630 aaKnown RBP9.32□□□□□ -0.92
CCL3-205ENST00000613928 JADE2Q9NQC1 790 aa9.32□□□□□ -0.92
CCL3-205ENST00000613928 IMPACTQ9P2X3 320 aa9.32□□□□□ -0.92
CCL3-205ENST00000613928 PCDHGC5Q9Y5F6 944 aa9.32□□□□□ -0.92
CCL3-205ENST00000613928 PTPRFP10586 1907 aa9.32□□□□□ -0.92
CCL3-205ENST00000613928 A0A0G2JLL6 359 aaPredicted RBP9.31□□□□□ -0.92
CCL3-205ENST00000613928 NPHP3-ACAD11A0A0J9YXS1 232 aa9.31□□□□□ -0.92
CCL3-205ENST00000613928 DHX15O43143 795 aaKnown RBP9.31□□□□□ -0.92
CCL3-205ENST00000613928 GAS7O60861 476 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms