RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 SOX4Q06945 474 aaPredicted RBP9.53□□□□□ -0.88
SNCA-212ENST00000611107 PRPF4BQ13523 1007 aaKnown RBP9.53□□□□□ -0.88
SNCA-212ENST00000611107 GLRA4Q5JXX5 417 aa9.53□□□□□ -0.88
SNCA-212ENST00000611107 ZBTB41Q5SVQ8 909 aa9.53□□□□□ -0.88
SNCA-212ENST00000611107 ADALQ6DHV7 355 aa9.53□□□□□ -0.88
SNCA-212ENST00000611107 FAM43BQ6ZT52 329 aaPredicted RBP9.53□□□□□ -0.88
SNCA-212ENST00000611107 TMC7Q7Z402 723 aa9.53□□□□□ -0.88
SNCA-212ENST00000611107 ZBTB33Q86T24 672 aa9.53□□□□□ -0.88
SNCA-212ENST00000611107 DDX53Q86TM3 631 aaKnown RBP9.53□□□□□ -0.88
SNCA-212ENST00000611107 GPBP1Q86WP2 473 aa9.53□□□□□ -0.88
SNCA-212ENST00000611107 MRPL43Q8N983 215 aaKnown RBP9.53□□□□□ -0.88
SNCA-212ENST00000611107 SMRP1Q8NCR6 262 aa9.53□□□□□ -0.88
SNCA-212ENST00000611107 TMEM161BQ8NDZ6 487 aa9.53□□□□□ -0.88
SNCA-212ENST00000611107 DEPTORQ8TB45 409 aa9.53□□□□□ -0.88
SNCA-212ENST00000611107 SLC22A17Q8WUG5 538 aa9.53□□□□□ -0.88
SNCA-212ENST00000611107 PGBD4Q96DM1 585 aa9.53□□□□□ -0.88
SNCA-212ENST00000611107 ACO2Q99798 780 aaKnown RBP9.53□□□□□ -0.88
SNCA-212ENST00000611107 REEP2Q9BRK0 252 aa9.53□□□□□ -0.88
SNCA-212ENST00000611107 FGFBP2Q9BYJ0 223 aa9.53□□□□□ -0.88
SNCA-212ENST00000611107 GPR62Q9BZJ7 368 aa9.53□□□□□ -0.88
SNCA-212ENST00000611107 GOLPH3LQ9H4A5 285 aa9.53□□□□□ -0.88
SNCA-212ENST00000611107 GOLGA2P5Q9HBQ8 144 aa9.53□□□□□ -0.88
SNCA-212ENST00000611107 ENTPD7Q9NQZ7 604 aa9.53□□□□□ -0.88
SNCA-212ENST00000611107 AAASQ9NRG9 546 aa9.53□□□□□ -0.88
SNCA-212ENST00000611107 PRMT7Q9NVM4 692 aaPredicted RBP9.53□□□□□ -0.88
SNCA-212ENST00000611107 CCDC39Q9UFE4 941 aa9.53□□□□□ -0.88
SNCA-212ENST00000611107 PARP2Q9UGN5 583 aa9.53□□□□□ -0.88
SNCA-212ENST00000611107 HPSEQ9Y251 543 aa9.53□□□□□ -0.88
SNCA-212ENST00000611107 GDAQ9Y2T3 454 aa9.53□□□□□ -0.88
SNCA-212ENST00000611107 DENND4AQ7Z401 1863 aa9.53□□□□□ -0.88
SNCA-212ENST00000611107 NOTCH4Q99466 2003 aa9.53□□□□□ -0.88
SNCA-212ENST00000611107 TSC2P49815 1807 aa9.52□□□□□ -0.89
SNCA-212ENST00000611107 FAM237AA0A1B0GTK4 181 aa9.52□□□□□ -0.89
SNCA-212ENST00000611107 A0A1B0GVL5 298 aa9.52□□□□□ -0.89
SNCA-212ENST00000611107 A0A1W2PQ27 194 aa9.52□□□□□ -0.89
SNCA-212ENST00000611107 A0A1W2PQ64 194 aa9.52□□□□□ -0.89
SNCA-212ENST00000611107 A0A1W2PQD8 194 aa9.52□□□□□ -0.89
SNCA-212ENST00000611107 C19orf67A6NJJ6 358 aa9.52□□□□□ -0.89
SNCA-212ENST00000611107 CTSAP10619 480 aa9.52□□□□□ -0.89
SNCA-212ENST00000611107 MAPTP10636 758 aaKnown RBP9.52□□□□□ -0.89
SNCA-212ENST00000611107 SKIP12755 728 aa9.52□□□□□ -0.89
SNCA-212ENST00000611107 PROZP22891 400 aa9.52□□□□□ -0.89
SNCA-212ENST00000611107 CMA1P23946 247 aa9.52□□□□□ -0.89
SNCA-212ENST00000611107 OR1G1P47890 313 aa9.52□□□□□ -0.89
SNCA-212ENST00000611107 ALDH7A1P49419 539 aaKnown RBP9.52□□□□□ -0.89
SNCA-212ENST00000611107 NDUFV1P49821 464 aa9.52□□□□□ -0.89
SNCA-212ENST00000611107 OSTNP61366 133 aa9.52□□□□□ -0.89
SNCA-212ENST00000611107 RNASELQ05823 741 aaKnown RBP9.52□□□□□ -0.89
SNCA-212ENST00000611107 ZP2Q05996 745 aa9.52□□□□□ -0.89
SNCA-212ENST00000611107 GIT2Q14161 759 aa9.52□□□□□ -0.89
SNCA-212ENST00000611107 PTPN14Q15678 1187 aa9.52□□□□□ -0.89
SNCA-212ENST00000611107 MAPK6Q16659 721 aa9.52□□□□□ -0.89
SNCA-212ENST00000611107 ATF7IP2Q5U623 682 aa9.52□□□□□ -0.89
SNCA-212ENST00000611107 RRAGBQ5VZM2 374 aa9.52□□□□□ -0.89
SNCA-212ENST00000611107 SLC39A4Q6P5W5 647 aa9.52□□□□□ -0.89
SNCA-212ENST00000611107 CCDC73Q6ZRK6 1079 aa9.52□□□□□ -0.89
SNCA-212ENST00000611107 TMEM87AQ8NBN3 555 aa9.52□□□□□ -0.89
SNCA-212ENST00000611107 C3orf58Q8NDZ4 430 aa9.52□□□□□ -0.89
SNCA-212ENST00000611107 HASPINQ8TF76 798 aa9.52□□□□□ -0.89
SNCA-212ENST00000611107 KIFAP3Q92845 792 aa9.52□□□□□ -0.89
SNCA-212ENST00000611107 DHX58Q96C10 678 aa9.52□□□□□ -0.89
SNCA-212ENST00000611107 CCDC51Q96ER9 411 aa9.52□□□□□ -0.89
SNCA-212ENST00000611107 PRIMPOLQ96LW4 560 aa9.52□□□□□ -0.89
SNCA-212ENST00000611107 ZMAT2Q96NC0 199 aaKnown RBP9.52□□□□□ -0.89
SNCA-212ENST00000611107 MRPL9Q9BYD2 267 aaKnown RBP9.52□□□□□ -0.89
SNCA-212ENST00000611107 PANK2Q9BZ23 570 aa9.52□□□□□ -0.89
SNCA-212ENST00000611107 KCND2Q9NZV8 630 aa9.52□□□□□ -0.89
SNCA-212ENST00000611107 CD207Q9UJ71 328 aa9.52□□□□□ -0.89
SNCA-212ENST00000611107 FAN1Q9Y2M0 1017 aa9.52□□□□□ -0.89
SNCA-212ENST00000611107 USP15Q9Y4E8 981 aaPredicted RBP9.52□□□□□ -0.89
SNCA-212ENST00000611107 SCN1AP35498 2009 aa9.51□□□□□ -0.89
SNCA-212ENST00000611107 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.51□□□□□ -0.89
SNCA-212ENST00000611107 FAM86C2PA6NEL3 165 aa9.51□□□□□ -0.89
SNCA-212ENST00000611107 CASTOR2A6NHX0 329 aa9.51□□□□□ -0.89
SNCA-212ENST00000611107 MYMKA6NI61 221 aa9.51□□□□□ -0.89
SNCA-212ENST00000611107 K7ERI5 159 aa9.51□□□□□ -0.89
SNCA-212ENST00000611107 C2CD2LO14523 706 aa9.51□□□□□ -0.89
SNCA-212ENST00000611107 N4BP3O15049 544 aa9.51□□□□□ -0.89
SNCA-212ENST00000611107 POLR2DO15514 142 aaKnown RBP9.51□□□□□ -0.89
SNCA-212ENST00000611107 ADAM12O43184 909 aa9.51□□□□□ -0.89
SNCA-212ENST00000611107 ACTN4O43707 911 aaKnown RBP9.51□□□□□ -0.89
SNCA-212ENST00000611107 CNPP09543 421 aaKnown RBP9.51□□□□□ -0.89
SNCA-212ENST00000611107 PLS3P13797 630 aa9.51□□□□□ -0.89
SNCA-212ENST00000611107 RPL17P18621 184 aaKnown RBP9.51□□□□□ -0.89
SNCA-212ENST00000611107 NMT1P30419 496 aaKnown RBP9.51□□□□□ -0.89
SNCA-212ENST00000611107 PPM1AP35813 382 aa9.51□□□□□ -0.89
SNCA-212ENST00000611107 NDUFA8P51970 172 aa9.51□□□□□ -0.89
SNCA-212ENST00000611107 ZNF131P52739 623 aa9.51□□□□□ -0.89
SNCA-212ENST00000611107 COASYQ13057 564 aa9.51□□□□□ -0.89
SNCA-212ENST00000611107 SMAD4Q13485 552 aaKnown RBP9.51□□□□□ -0.89
SNCA-212ENST00000611107 SMAD2Q15796 467 aaKnown RBP9.51□□□□□ -0.89
SNCA-212ENST00000611107 AAK1Q2M2I8 961 aa9.51□□□□□ -0.89
SNCA-212ENST00000611107 KIAA0319Q5VV43 1072 aa9.51□□□□□ -0.89
SNCA-212ENST00000611107 SCARA3Q6AZY7 606 aa9.51□□□□□ -0.89
SNCA-212ENST00000611107 ANKRD54Q6NXT1 300 aa9.51□□□□□ -0.89
SNCA-212ENST00000611107 ALKAL1Q6UXT8 129 aa9.51□□□□□ -0.89
SNCA-212ENST00000611107 TMEM184AQ6ZMB5 413 aa9.51□□□□□ -0.89
SNCA-212ENST00000611107 ZBTB8OSQ8IWT0 167 aa9.51□□□□□ -0.89
SNCA-212ENST00000611107 FSIP1Q8NA03 581 aa9.51□□□□□ -0.89
SNCA-212ENST00000611107 ZSWIM2Q8NEG5 633 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms