RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 STRN3Q13033 797 aa12.77□□□□□ -0.36
TP53-220ENST00000610623 EDRF1Q3B7T1 1238 aa12.77□□□□□ -0.36
TP53-220ENST00000610623 USP17L1Q7RTZ2 530 aa12.77□□□□□ -0.36
TP53-220ENST00000610623 TRIM74Q86UV6 250 aa12.77□□□□□ -0.36
TP53-220ENST00000610623 TRIM73Q86UV7 250 aa12.77□□□□□ -0.36
TP53-220ENST00000610623 LONP2Q86WA8 852 aa12.77□□□□□ -0.36
TP53-220ENST00000610623 LRRC37BQ96QE4 947 aa12.77□□□□□ -0.36
TP53-220ENST00000610623 MTMR9Q96QG7 549 aa12.77□□□□□ -0.36
TP53-220ENST00000610623 TMEM47Q9BQJ4 181 aa12.77□□□□□ -0.36
TP53-220ENST00000610623 TIPINQ9BVW5 301 aa12.77□□□□□ -0.36
TP53-220ENST00000610623 TBC1D10AQ9BXI6 508 aa12.77□□□□□ -0.36
TP53-220ENST00000610623 PITPNM3Q9BZ71 974 aa12.77□□□□□ -0.36
TP53-220ENST00000610623 OCEL1Q9H607 264 aa12.77□□□□□ -0.36
TP53-220ENST00000610623 PPP1R9AQ9ULJ8 1098 aa12.77□□□□□ -0.36
TP53-220ENST00000610623 STARD13Q9Y3M8 1113 aa12.77□□□□□ -0.36
TP53-220ENST00000610623 USH1CQ9Y6N9 552 aa12.77□□□□□ -0.36
TP53-220ENST00000610623 RPS6KL1Q9Y6S9 549 aa12.77□□□□□ -0.36
TP53-220ENST00000610623 SYNGAP1Q96PV0 1343 aa12.77□□□□□ -0.37
TP53-220ENST00000610623 C10orf71Q711Q0 1435 aa12.77□□□□□ -0.37
TP53-220ENST00000610623 PALM3A6NDB9 673 aaPredicted RBP12.77□□□□□ -0.37
TP53-220ENST00000610623 DDX3XO00571 662 aaKnown RBP eCLIP12.77□□□□□ -0.37
TP53-220ENST00000610623 CETN3O15182 167 aa12.77□□□□□ -0.37
TP53-220ENST00000610623 CREB3O43889 395 aa12.77□□□□□ -0.37
TP53-220ENST00000610623 COQ9O75208 318 aa12.77□□□□□ -0.37
TP53-220ENST00000610623 DCTN3O75935 186 aa12.77□□□□□ -0.37
TP53-220ENST00000610623 GGPS1O95749 300 aa12.77□□□□□ -0.37
TP53-220ENST00000610623 TMEM253P0C7T8 217 aa12.77□□□□□ -0.37
TP53-220ENST00000610623 MYBL1P10243 752 aa12.77□□□□□ -0.37
TP53-220ENST00000610623 SMARCA1P28370 1054 aa12.77□□□□□ -0.37
TP53-220ENST00000610623 GNA11P29992 359 aa12.77□□□□□ -0.37
TP53-220ENST00000610623 DPP8Q6V1X1 898 aaPredicted RBP12.77□□□□□ -0.37
TP53-220ENST00000610623 PPP1R21Q6ZMI0 780 aa12.77□□□□□ -0.37
TP53-220ENST00000610623 ANKRD42Q8N9B4 389 aa12.77□□□□□ -0.37
TP53-220ENST00000610623 SLC44A5Q8NCS7 719 aa12.77□□□□□ -0.37
TP53-220ENST00000610623 SLC35G2Q8TBE7 412 aa12.77□□□□□ -0.37
TP53-220ENST00000610623 RBM46Q8TBY0 533 aaKnown RBP12.77□□□□□ -0.37
TP53-220ENST00000610623 DNAJC19Q96DA6 116 aa12.77□□□□□ -0.37
TP53-220ENST00000610623 PDP2Q9P2J9 529 aa12.77□□□□□ -0.37
TP53-220ENST00000610623 RBM47A0AV96 593 aaKnown RBP12.76□□□□□ -0.37
TP53-220ENST00000610623 MAGEA13PA6NCF6 341 aa12.76□□□□□ -0.37
TP53-220ENST00000610623 SIGLEC16A6NMB1 481 aa12.76□□□□□ -0.37
TP53-220ENST00000610623 RIMBP2O15034 1052 aa12.76□□□□□ -0.37
TP53-220ENST00000610623 HNRNPCL1O60812 293 aaKnown RBP12.76□□□□□ -0.37
TP53-220ENST00000610623 TTLL1O95922 423 aa12.76□□□□□ -0.37
TP53-220ENST00000610623 SETSIPP0DME0 302 aa12.76□□□□□ -0.37
TP53-220ENST00000610623 ACTN1P12814 892 aa12.76□□□□□ -0.37
TP53-220ENST00000610623 BRAFP15056 766 aa12.76□□□□□ -0.37
TP53-220ENST00000610623 VCAM1P19320 739 aa12.76□□□□□ -0.37
TP53-220ENST00000610623 SLC9A1P19634 815 aa12.76□□□□□ -0.37
TP53-220ENST00000610623 NOVP48745 357 aa12.76□□□□□ -0.37
TP53-220ENST00000610623 LONRF1Q17RB8 773 aa12.76□□□□□ -0.37
TP53-220ENST00000610623 EXOC3L4Q17RC7 722 aa12.76□□□□□ -0.37
TP53-220ENST00000610623 UBAP2Q5T6F2 1119 aaKnown RBP12.76□□□□□ -0.37
TP53-220ENST00000610623 KRT79Q5XKE5 535 aa12.76□□□□□ -0.37
TP53-220ENST00000610623 FRMD5Q7Z6J6 570 aa12.76□□□□□ -0.37
TP53-220ENST00000610623 DNAAF5Q86Y56 855 aa12.76□□□□□ -0.37
TP53-220ENST00000610623 LRRC8CQ8TDW0 803 aa12.76□□□□□ -0.37
TP53-220ENST00000610623 U2AF1L4Q8WU68 220 aaKnown RBP12.76□□□□□ -0.37
TP53-220ENST00000610623 C18orf8Q96DM3 657 aa12.76□□□□□ -0.37
TP53-220ENST00000610623 ERP27Q96DN0 273 aa12.76□□□□□ -0.37
TP53-220ENST00000610623 SPZ1Q9BXG8 430 aa12.76□□□□□ -0.37
TP53-220ENST00000610623 VCX3BQ9H321 246 aa12.76□□□□□ -0.37
TP53-220ENST00000610623 TLE6Q9H808 572 aa12.76□□□□□ -0.37
TP53-220ENST00000610623 C6orf50Q9HD87 102 aa12.76□□□□□ -0.37
TP53-220ENST00000610623 VCX3AQ9NNX9 186 aa12.76□□□□□ -0.37
TP53-220ENST00000610623 NMRK1Q9NWW6 199 aa12.76□□□□□ -0.37
TP53-220ENST00000610623 NKIRAS1Q9NYS0 192 aa12.76□□□□□ -0.37
TP53-220ENST00000610623 KIAA1522Q9P206 1035 aaPredicted RBP12.76□□□□□ -0.37
TP53-220ENST00000610623 HDAC9Q9UKV0 1011 aa12.76□□□□□ -0.37
TP53-220ENST00000610623 PFASO15067 1338 aa12.76□□□□□ -0.37
TP53-220ENST00000610623 MYO3BQ8WXR4 1341 aa12.76□□□□□ -0.37
TP53-220ENST00000610623 A0A1B0GVG6 124 aa12.76□□□□□ -0.37
TP53-220ENST00000610623 TCEA3O75764 348 aa12.76□□□□□ -0.37
TP53-220ENST00000610623 ALAS1P13196 640 aa12.76□□□□□ -0.37
TP53-220ENST00000610623 CTNNA2P26232 953 aa12.76□□□□□ -0.37
TP53-220ENST00000610623 PON1P27169 355 aa12.76□□□□□ -0.37
TP53-220ENST00000610623 COPB2P35606 906 aa12.76□□□□□ -0.37
TP53-220ENST00000610623 JAM2P57087 298 aa12.76□□□□□ -0.37
TP53-220ENST00000610623 TMEM119Q4V9L6 283 aa12.76□□□□□ -0.37
TP53-220ENST00000610623 OTUD6AQ7L8S5 288 aa12.76□□□□□ -0.37
TP53-220ENST00000610623 ADAT2Q7Z6V5 191 aaKnown RBP12.76□□□□□ -0.37
TP53-220ENST00000610623 RBM12BQ8IXT5 1001 aaKnown RBP12.76□□□□□ -0.37
TP53-220ENST00000610623 GDAP1Q8TB36 358 aa12.76□□□□□ -0.37
TP53-220ENST00000610623 PTPRN2Q92932 1015 aa12.76□□□□□ -0.37
TP53-220ENST00000610623 SLC7A6OSQ96CW6 309 aaPredicted RBP12.76□□□□□ -0.37
TP53-220ENST00000610623 KCTD10Q9H3F6 313 aa12.76□□□□□ -0.37
TP53-220ENST00000610623 KANSL2Q9H9L4 492 aa12.76□□□□□ -0.37
TP53-220ENST00000610623 OSGEPQ9NPF4 335 aa12.76□□□□□ -0.37
TP53-220ENST00000610623 HAO1Q9UJM8 370 aa12.76□□□□□ -0.37
TP53-220ENST00000610623 STX8Q9UNK0 236 aa12.76□□□□□ -0.37
TP53-220ENST00000610623 ACTL7BQ9Y614 415 aa12.76□□□□□ -0.37
TP53-220ENST00000610623 MAGEB2O15479 319 aa12.75□□□□□ -0.37
TP53-220ENST00000610623 MMP10P09238 476 aa12.75□□□□□ -0.37
TP53-220ENST00000610623 CREB1P16220 341 aa12.75□□□□□ -0.37
TP53-220ENST00000610623 TAC1P20366 129 aa12.75□□□□□ -0.37
TP53-220ENST00000610623 LMNB1P20700 586 aa12.75□□□□□ -0.37
TP53-220ENST00000610623 TARSP26639 723 aaKnown RBP12.75□□□□□ -0.37
TP53-220ENST00000610623 MAGEA8P43361 318 aa12.75□□□□□ -0.37
TP53-220ENST00000610623 IL9RQ01113 521 aa12.75□□□□□ -0.37
TP53-220ENST00000610623 RRP1BQ14684 758 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms