RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 RASGRF2O14827 1237 aa15.72■□□□□ 0.11
CTCFL-219ENST00000608720 SPOPO43791 374 aa15.72■□□□□ 0.11
CTCFL-219ENST00000608720 MCCD1P59942 119 aaPredicted RBP15.72■□□□□ 0.11
CTCFL-219ENST00000608720 SARNPP82979 210 aaKnown RBP15.72■□□□□ 0.11
CTCFL-219ENST00000608720 GTF2BQ00403 316 aa15.72■□□□□ 0.11
CTCFL-219ENST00000608720 RIPK1Q13546 671 aa15.72■□□□□ 0.11
CTCFL-219ENST00000608720 SPRED3Q2MJR0 410 aa15.72■□□□□ 0.11
CTCFL-219ENST00000608720 TNFAIP8L3Q5GJ75 292 aa15.72■□□□□ 0.11
CTCFL-219ENST00000608720 TAOK1Q7L7X3 1001 aa15.72■□□□□ 0.11
CTCFL-219ENST00000608720 PIGWQ7Z7B1 504 aa15.72■□□□□ 0.11
CTCFL-219ENST00000608720 C12orf50Q8NA57 414 aaPredicted RBP15.72■□□□□ 0.11
CTCFL-219ENST00000608720 NUP85Q9BW27 656 aa15.72■□□□□ 0.11
CTCFL-219ENST00000608720 TMEM117Q9H0C3 514 aa15.72■□□□□ 0.11
CTCFL-219ENST00000608720 DEFB129Q9H1M3 183 aa15.72■□□□□ 0.11
CTCFL-219ENST00000608720 SMIM23A6NLE4 172 aa15.71■□□□□ 0.11
CTCFL-219ENST00000608720 TISP43B9A030 160 aa15.71■□□□□ 0.11
CTCFL-219ENST00000608720 RARAP10276 462 aa15.71■□□□□ 0.11
CTCFL-219ENST00000608720 RWDD2BP57060 319 aa15.71■□□□□ 0.11
CTCFL-219ENST00000608720 NAIF1Q69YI7 327 aaPredicted RBP15.71■□□□□ 0.11
CTCFL-219ENST00000608720 TRMT10CQ7L0Y3 403 aaKnown RBP15.71■□□□□ 0.11
CTCFL-219ENST00000608720 CCHCR1Q8TD31 782 aa15.71■□□□□ 0.11
CTCFL-219ENST00000608720 KAT5Q92993 513 aa15.71■□□□□ 0.11
CTCFL-219ENST00000608720 PRMT6Q96LA8 375 aaPredicted RBP15.71■□□□□ 0.11
CTCFL-219ENST00000608720 LRRC19Q9H756 370 aa15.71■□□□□ 0.11
CTCFL-219ENST00000608720 GTF3C4Q9UKN8 822 aa15.71■□□□□ 0.11
CTCFL-219ENST00000608720 NRXN2Q9P2S2 1712 aa15.71■□□□□ 0.11
CTCFL-219ENST00000608720 DDX39AO00148 427 aaKnown RBP15.71■□□□□ 0.1
CTCFL-219ENST00000608720 CYP26A1O43174 497 aa15.71■□□□□ 0.1
CTCFL-219ENST00000608720 ITGB5P18084 799 aa15.71■□□□□ 0.1
CTCFL-219ENST00000608720 SIX1Q15475 284 aaPredicted RBP15.71■□□□□ 0.1
CTCFL-219ENST00000608720 MFSD5Q6N075 450 aa15.71■□□□□ 0.1
CTCFL-219ENST00000608720 HAUS6Q7Z4H7 955 aa15.71■□□□□ 0.1
CTCFL-219ENST00000608720 LDHDQ86WU2 507 aa15.71■□□□□ 0.1
CTCFL-219ENST00000608720 PLEKHO2Q8TD55 490 aa15.71■□□□□ 0.1
CTCFL-219ENST00000608720 SHC3Q92529 594 aa15.71■□□□□ 0.1
CTCFL-219ENST00000608720 TIPINQ9BVW5 301 aa15.71■□□□□ 0.1
CTCFL-219ENST00000608720 PLVAPQ9BX97 442 aa15.71■□□□□ 0.1
CTCFL-219ENST00000608720 HOMER3Q9NSC5 361 aa15.71■□□□□ 0.1
CTCFL-219ENST00000608720 HAUS2Q9NVX0 235 aa15.71■□□□□ 0.1
CTCFL-219ENST00000608720 SAMD15Q9P1V8 674 aa15.71■□□□□ 0.1
CTCFL-219ENST00000608720 CHORDC1Q9UHD1 332 aaPredicted RBP15.71■□□□□ 0.1
CTCFL-219ENST00000608720 BCS1LQ9Y276 419 aa15.71■□□□□ 0.1
CTCFL-219ENST00000608720 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.71■□□□□ 0.1
CTCFL-219ENST00000608720 ZHX2Q9Y6X8 837 aa15.71■□□□□ 0.1
CTCFL-219ENST00000608720 PPIP5K2O43314 1243 aa15.7■□□□□ 0.1
CTCFL-219ENST00000608720 LYPLA2O95372 231 aa15.7■□□□□ 0.1
CTCFL-219ENST00000608720 ECEL1O95672 775 aa15.7■□□□□ 0.1
CTCFL-219ENST00000608720 FGFR4P22455 802 aa15.7■□□□□ 0.1
CTCFL-219ENST00000608720 GBP2P32456 591 aaPredicted RBP15.7■□□□□ 0.1
CTCFL-219ENST00000608720 RARRES1P49788 294 aa15.7■□□□□ 0.1
CTCFL-219ENST00000608720 FMO1Q01740 532 aa15.7■□□□□ 0.1
CTCFL-219ENST00000608720 CALCOCO2Q13137 446 aa15.7■□□□□ 0.1
CTCFL-219ENST00000608720 AUHQ13825 339 aaKnown RBP15.7■□□□□ 0.1
CTCFL-219ENST00000608720 NIPA1Q7RTP0 329 aa15.7■□□□□ 0.1
CTCFL-219ENST00000608720 PPM1KQ8N3J5 372 aa15.7■□□□□ 0.1
CTCFL-219ENST00000608720 SLC17A8Q8NDX2 589 aa15.7■□□□□ 0.1
CTCFL-219ENST00000608720 SLCO2A1Q92959 643 aa15.7■□□□□ 0.1
CTCFL-219ENST00000608720 KREMEN1Q96MU8 473 aa15.7■□□□□ 0.1
CTCFL-219ENST00000608720 NSRP1Q9H0G5 558 aaKnown RBP15.7■□□□□ 0.1
CTCFL-219ENST00000608720 KCNH7Q9NS40 1196 aa15.7■□□□□ 0.1
CTCFL-219ENST00000608720 TMOD2Q9NZR1 351 aa15.7■□□□□ 0.1
CTCFL-219ENST00000608720 ANKRD31Q8N7Z5 1873 aa15.7■□□□□ 0.1
CTCFL-219ENST00000608720 TCRBV7S2A1N4TA0A589 114 aa15.7■□□□□ 0.1
CTCFL-219ENST00000608720 GSTA1P08263 222 aa15.7■□□□□ 0.1
CTCFL-219ENST00000608720 CDR2Q01850 454 aa15.7■□□□□ 0.1
CTCFL-219ENST00000608720 RNF207Q6ZRF8 634 aa15.7■□□□□ 0.1
CTCFL-219ENST00000608720 SLC47A2Q86VL8 602 aa15.7■□□□□ 0.1
CTCFL-219ENST00000608720 LRRC34Q8IZ02 419 aa15.7■□□□□ 0.1
CTCFL-219ENST00000608720 EPS8L3Q8TE67 593 aaKnown RBP15.7■□□□□ 0.1
CTCFL-219ENST00000608720 ZNF483Q8TF39 744 aaPredicted RBP15.7■□□□□ 0.1
CTCFL-219ENST00000608720 ZNF653Q96CK0 615 aa15.7■□□□□ 0.1
CTCFL-219ENST00000608720 PRMT1Q99873 361 aaKnown RBP15.7■□□□□ 0.1
CTCFL-219ENST00000608720 SH3GL3Q99963 347 aa15.7■□□□□ 0.1
CTCFL-219ENST00000608720 WHRNQ9P202 907 aa15.7■□□□□ 0.1
CTCFL-219ENST00000608720 FEM1BQ9UK73 627 aa15.7■□□□□ 0.1
CTCFL-219ENST00000608720 ZBTB21Q9ULJ3 1066 aa15.7■□□□□ 0.1
CTCFL-219ENST00000608720 PTPN22Q9Y2R2 807 aa15.7■□□□□ 0.1
CTCFL-219ENST00000608720 SOCS7O14512 581 aa15.69■□□□□ 0.1
CTCFL-219ENST00000608720 ATMINO43313 823 aaPredicted RBP15.69■□□□□ 0.1
CTCFL-219ENST00000608720 QARSP47897 775 aaKnown RBP15.69■□□□□ 0.1
CTCFL-219ENST00000608720 HSD17B4P51659 736 aa15.69■□□□□ 0.1
CTCFL-219ENST00000608720 PPP1R7Q15435 360 aa15.69■□□□□ 0.1
CTCFL-219ENST00000608720 MIGA2Q7L4E1 593 aa15.69■□□□□ 0.1
CTCFL-219ENST00000608720 KIFAP3Q92845 792 aa15.69■□□□□ 0.1
CTCFL-219ENST00000608720 SCLT1Q96NL6 688 aa15.69■□□□□ 0.1
CTCFL-219ENST00000608720 EXOC7Q9UPT5 735 aa15.69■□□□□ 0.1
CTCFL-219ENST00000608720 ANKRD63C9JTQ0 380 aa15.68■□□□□ 0.1
CTCFL-219ENST00000608720 FSCN2O14926 492 aa15.68■□□□□ 0.1
CTCFL-219ENST00000608720 DHX15O43143 795 aaKnown RBP15.68■□□□□ 0.1
CTCFL-219ENST00000608720 ATP2C2O75185 946 aa15.68■□□□□ 0.1
CTCFL-219ENST00000608720 ATP6V1G2O95670 118 aa15.68■□□□□ 0.1
CTCFL-219ENST00000608720 CYP11B1P15538 503 aa15.68■□□□□ 0.1
CTCFL-219ENST00000608720 SLCO1A2P46721 670 aa15.68■□□□□ 0.1
CTCFL-219ENST00000608720 CNGA2Q16280 664 aa15.68■□□□□ 0.1
CTCFL-219ENST00000608720 ZNF568Q3ZCX4 644 aa15.68■□□□□ 0.1
CTCFL-219ENST00000608720 CDCA2Q69YH5 1023 aaPredicted RBP15.68■□□□□ 0.1
CTCFL-219ENST00000608720 KRT39Q6A163 491 aa15.68■□□□□ 0.1
CTCFL-219ENST00000608720 UHMK1Q8TAS1 419 aaKnown RBP15.68■□□□□ 0.1
CTCFL-219ENST00000608720 BTBD6Q96KE9 485 aa15.68■□□□□ 0.1
CTCFL-219ENST00000608720 SPATS2LQ9NUQ6 558 aaKnown RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms