RNA–Protein interactions for RNA: ENST00000603633.2

LINC00221-201, long intergenic non-protein coding RNA 221, humanhuman

TSL 2 BASIC

Gene LINC00221, Length 1,656 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00221-201ENST00000603633 GLIS3Q8NEA6 775 aa17.11■□□□□ 0.33
LINC00221-201ENST00000603633 FAM193BQ96PV7 902 aaPredicted RBP17.11■□□□□ 0.33
LINC00221-201ENST00000603633 TYW1Q9NV66 732 aaKnown RBP17.11■□□□□ 0.33
LINC00221-201ENST00000603633 AGO2Q9UKV8 859 aaKnown RBP17.11■□□□□ 0.33
LINC00221-201ENST00000603633 GDAQ9Y2T3 454 aa17.11■□□□□ 0.33
LINC00221-201ENST00000603633 PCDHB12Q9Y5F1 795 aa17.11■□□□□ 0.33
LINC00221-201ENST00000603633 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.11■□□□□ 0.33
LINC00221-201ENST00000603633 MRPL42Q9Y6G3 142 aaKnown RBP17.11■□□□□ 0.33
LINC00221-201ENST00000603633 LAMA3Q16787 3333 aa17.11■□□□□ 0.33
LINC00221-201ENST00000603633 PTMSP20962 102 aa17.1■□□□□ 0.33
LINC00221-201ENST00000603633 BMPR1AP36894 532 aa17.1■□□□□ 0.33
LINC00221-201ENST00000603633 PPP1R2P41236 205 aa17.1■□□□□ 0.33
LINC00221-201ENST00000603633 ZNF658Q5TYW1 1059 aaPredicted RBP17.1■□□□□ 0.33
LINC00221-201ENST00000603633 ARMCX5Q6P1M9 558 aa17.1■□□□□ 0.33
LINC00221-201ENST00000603633 TMEM192Q8IY95 271 aa17.1■□□□□ 0.33
LINC00221-201ENST00000603633 GUF1Q8N442 669 aaKnown RBP17.1■□□□□ 0.33
LINC00221-201ENST00000603633 TSPAN18Q96SJ8 248 aa17.1■□□□□ 0.33
LINC00221-201ENST00000603633 SEMA6BQ9H3T3 888 aa17.1■□□□□ 0.33
LINC00221-201ENST00000603633 TBC1D13Q9NVG8 400 aa17.1■□□□□ 0.33
LINC00221-201ENST00000603633 SIP14410 1827 aa17.1■□□□□ 0.33
LINC00221-201ENST00000603633 ADSSP30520 456 aa17.1■□□□□ 0.33
LINC00221-201ENST00000603633 ALDH7A1P49419 539 aaKnown RBP17.1■□□□□ 0.33
LINC00221-201ENST00000603633 OSTNP61366 133 aa17.1■□□□□ 0.33
LINC00221-201ENST00000603633 GRIK3Q13003 919 aa17.1■□□□□ 0.33
LINC00221-201ENST00000603633 COBLL1Q53SF7 1204 aa17.1■□□□□ 0.33
LINC00221-201ENST00000603633 CD302Q8IX05 232 aa17.1■□□□□ 0.33
LINC00221-201ENST00000603633 NELFCDQ8IXH7 590 aa17.1■□□□□ 0.33
LINC00221-201ENST00000603633 HAPLN2Q9GZV7 340 aa17.1■□□□□ 0.33
LINC00221-201ENST00000603633 CLSTN2Q9H4D0 955 aa17.1■□□□□ 0.33
LINC00221-201ENST00000603633 RPF1Q9H9Y2 349 aaKnown RBP17.1■□□□□ 0.33
LINC00221-201ENST00000603633 KIAA1586Q9HCI6 787 aa17.1■□□□□ 0.33
LINC00221-201ENST00000603633 C5orf67F2Z3F1 127 aa17.09■□□□□ 0.33
LINC00221-201ENST00000603633 THP07101 528 aa17.09■□□□□ 0.33
LINC00221-201ENST00000603633 MCM4P33991 863 aa17.09■□□□□ 0.33
LINC00221-201ENST00000603633 HOXD13P35453 343 aa17.09■□□□□ 0.33
LINC00221-201ENST00000603633 PPM1AP35813 382 aa17.09■□□□□ 0.33
LINC00221-201ENST00000603633 XKR4Q5GH76 650 aa17.09■□□□□ 0.33
LINC00221-201ENST00000603633 LRRC55Q6ZSA7 311 aa17.09■□□□□ 0.33
LINC00221-201ENST00000603633 CEP120Q8N960 986 aa17.09■□□□□ 0.33
LINC00221-201ENST00000603633 TRIML1Q8N9V2 468 aa17.09■□□□□ 0.33
LINC00221-201ENST00000603633 ZFP42Q96MM3 310 aa17.09■□□□□ 0.33
LINC00221-201ENST00000603633 TMEM175Q9BSA9 504 aa17.09■□□□□ 0.33
LINC00221-201ENST00000603633 C11orf84Q9BUA3 381 aaPredicted RBP17.09■□□□□ 0.33
LINC00221-201ENST00000603633 NUP62CLQ9H1M0 184 aa17.09■□□□□ 0.33
LINC00221-201ENST00000603633 CWH43Q9H720 699 aa17.09■□□□□ 0.33
LINC00221-201ENST00000603633 SLC38A7Q9NVC3 462 aa17.09■□□□□ 0.33
LINC00221-201ENST00000603633 KLK14Q9P0G3 267 aa17.09■□□□□ 0.33
LINC00221-201ENST00000603633 KIAA1468Q9P260 1216 aa17.09■□□□□ 0.33
LINC00221-201ENST00000603633 COL4A6Q14031 1691 aa17.09■□□□□ 0.33
LINC00221-201ENST00000603633 PDXKO00764 312 aa17.08■□□□□ 0.32
LINC00221-201ENST00000603633 TGFB1I1O43294 461 aa17.08■□□□□ 0.32
LINC00221-201ENST00000603633 EXTL3O43909 919 aa17.08■□□□□ 0.32
LINC00221-201ENST00000603633 POMCP01189 267 aa17.08■□□□□ 0.32
LINC00221-201ENST00000603633 ALDH2P05091 517 aa17.08■□□□□ 0.32
LINC00221-201ENST00000603633 CTNNB1P35222 781 aa17.08■□□□□ 0.32
LINC00221-201ENST00000603633 SCNN1GP51170 649 aa17.08■□□□□ 0.32
LINC00221-201ENST00000603633 STIM1Q13586 685 aa17.08■□□□□ 0.32
LINC00221-201ENST00000603633 CAMK4Q16566 473 aa17.08■□□□□ 0.32
LINC00221-201ENST00000603633 EPC2Q52LR7 807 aa17.08■□□□□ 0.32
LINC00221-201ENST00000603633 ALKAL1Q6UXT8 129 aa17.08■□□□□ 0.32
LINC00221-201ENST00000603633 C12orf56Q8IXR9 622 aa17.08■□□□□ 0.32
LINC00221-201ENST00000603633 TMEM174Q8WUU8 243 aa17.08■□□□□ 0.32
LINC00221-201ENST00000603633 ARNTL2Q8WYA1 636 aa17.08■□□□□ 0.32
LINC00221-201ENST00000603633 P2RX5Q93086 422 aa17.08■□□□□ 0.32
LINC00221-201ENST00000603633 SNX27Q96L92 541 aa17.08■□□□□ 0.32
LINC00221-201ENST00000603633 ZNF558Q96NG5 402 aa17.08■□□□□ 0.32
LINC00221-201ENST00000603633 AGPAT3Q9NRZ7 376 aa17.08■□□□□ 0.32
LINC00221-201ENST00000603633 CNTN3Q9P232 1028 aa17.08■□□□□ 0.32
LINC00221-201ENST00000603633 CPSF3Q9UKF6 684 aaKnown RBP17.08■□□□□ 0.32
LINC00221-201ENST00000603633 TTC3P53804 2025 aa17.08■□□□□ 0.32
LINC00221-201ENST00000603633 TISP43B9A030 160 aa17.07■□□□□ 0.32
LINC00221-201ENST00000603633 CALUO43852 315 aaPredicted RBP17.07■□□□□ 0.32
LINC00221-201ENST00000603633 FAM189A1O60320 539 aa17.07■□□□□ 0.32
LINC00221-201ENST00000603633 ARHGEF15O94989 841 aa17.07■□□□□ 0.32
LINC00221-201ENST00000603633 LINC00271P0C7V0 271 aa17.07■□□□□ 0.32
LINC00221-201ENST00000603633 KCNE1P15382 129 aa17.07■□□□□ 0.32
LINC00221-201ENST00000603633 PPP2R3AQ06190 1150 aa17.07■□□□□ 0.32
LINC00221-201ENST00000603633 MYBPC2Q14324 1141 aa17.07■□□□□ 0.32
LINC00221-201ENST00000603633 KCNT2Q6UVM3 1135 aa17.07■□□□□ 0.32
LINC00221-201ENST00000603633 GSTCDQ8NEC7 633 aa17.07■□□□□ 0.32
LINC00221-201ENST00000603633 FBXO22Q8NEZ5 403 aa17.07■□□□□ 0.32
LINC00221-201ENST00000603633 C17orf80Q9BSJ5 609 aa17.07■□□□□ 0.32
LINC00221-201ENST00000603633 TTYH1Q9H313 450 aaPredicted RBP17.07■□□□□ 0.32
LINC00221-201ENST00000603633 STK39Q9UEW8 545 aa17.07■□□□□ 0.32
LINC00221-201ENST00000603633 MAN1B1Q9UKM7 699 aa17.07■□□□□ 0.32
LINC00221-201ENST00000603633 TRIOBPQ9H2D6 2365 aa17.07■□□□□ 0.32
LINC00221-201ENST00000603633 ZC3H11AO75152 810 aaKnown RBP eCLIP17.07■□□□□ 0.32
LINC00221-201ENST00000603633 ADRB2P07550 413 aa17.07■□□□□ 0.32
LINC00221-201ENST00000603633 SLC10A6Q3KNW5 377 aa17.07■□□□□ 0.32
LINC00221-201ENST00000603633 GPD1LQ8N335 351 aa17.07■□□□□ 0.32
LINC00221-201ENST00000603633 DEFB123Q8N688 67 aa17.07■□□□□ 0.32
LINC00221-201ENST00000603633 COLGALT1Q8NBJ5 622 aa17.07■□□□□ 0.32
LINC00221-201ENST00000603633 ERCC4Q92889 916 aaPredicted RBP17.07■□□□□ 0.32
LINC00221-201ENST00000603633 CBWD1Q9BRT8 395 aa17.07■□□□□ 0.32
LINC00221-201ENST00000603633 KCTD10Q9H3F6 313 aa17.07■□□□□ 0.32
LINC00221-201ENST00000603633 ASB7Q9H672 318 aa17.07■□□□□ 0.32
LINC00221-201ENST00000603633 NRDE2Q9H7Z3 1164 aa17.07■□□□□ 0.32
LINC00221-201ENST00000603633 MIOSQ9NXC5 875 aa17.07■□□□□ 0.32
LINC00221-201ENST00000603633 SMIM28A0A1B0GU29 152 aa17.06■□□□□ 0.32
LINC00221-201ENST00000603633 TTC26A0AVF1 554 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms