RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 TGM5O43548 720 aa19.7■□□□□ 0.74
SHKBP1-227ENST00000602011 SPATA31C1P0DKV0 1188 aa19.7■□□□□ 0.74
SHKBP1-227ENST00000602011 AKAP5P24588 427 aa19.7■□□□□ 0.74
SHKBP1-227ENST00000602011 RPA1P27694 616 aa19.7■□□□□ 0.74
SHKBP1-227ENST00000602011 HSP90AA2PQ14568 343 aaPredicted RBP19.7■□□□□ 0.74
SHKBP1-227ENST00000602011 MAPK6Q16659 721 aa19.7■□□□□ 0.74
SHKBP1-227ENST00000602011 APBB1IPQ7Z5R6 666 aaPredicted RBP19.7■□□□□ 0.74
SHKBP1-227ENST00000602011 CATSPER3Q86XQ3 398 aa19.7■□□□□ 0.74
SHKBP1-227ENST00000602011 RSAD2Q8WXG1 361 aa19.7■□□□□ 0.74
SHKBP1-227ENST00000602011 RIN2Q8WYP3 895 aaPredicted RBP19.7■□□□□ 0.74
SHKBP1-227ENST00000602011 GPR62Q9BZJ7 368 aa19.7■□□□□ 0.74
SHKBP1-227ENST00000602011 SEMA4AQ9H3S1 761 aa19.7■□□□□ 0.74
SHKBP1-227ENST00000602011 GVINP1Q7Z2Y8 2422 aa19.69■□□□□ 0.74
SHKBP1-227ENST00000602011 ACKR2O00590 384 aa19.69■□□□□ 0.74
SHKBP1-227ENST00000602011 USO1O60763 962 aaKnown RBP19.69■□□□□ 0.74
SHKBP1-227ENST00000602011 N4BP1O75113 896 aaKnown RBP19.69■□□□□ 0.74
SHKBP1-227ENST00000602011 ZMYND10O75800 440 aa19.69■□□□□ 0.74
SHKBP1-227ENST00000602011 THP07101 528 aa19.69■□□□□ 0.74
SHKBP1-227ENST00000602011 HNRNPA1P09651 372 aaKnown RBP eCLIP19.69■□□□□ 0.74
SHKBP1-227ENST00000602011 SRFP11831 508 aa19.69■□□□□ 0.74
SHKBP1-227ENST00000602011 CYP11B2P19099 503 aa19.69■□□□□ 0.74
SHKBP1-227ENST00000602011 NEK4P51957 841 aa19.69■□□□□ 0.74
SHKBP1-227ENST00000602011 EFNA5P52803 228 aa19.69■□□□□ 0.74
SHKBP1-227ENST00000602011 FOXK2Q01167 660 aa19.69■□□□□ 0.74
SHKBP1-227ENST00000602011 PALB2Q86YC2 1186 aa19.69■□□□□ 0.74
SHKBP1-227ENST00000602011 CCDC105Q8IYK2 499 aa19.69■□□□□ 0.74
SHKBP1-227ENST00000602011 ADSSL1Q8N142 457 aa19.69■□□□□ 0.74
SHKBP1-227ENST00000602011 SIX5Q8N196 739 aa19.69■□□□□ 0.74
SHKBP1-227ENST00000602011 SLC44A3Q8N4M1 653 aa19.69■□□□□ 0.74
SHKBP1-227ENST00000602011 NKD2Q969F2 451 aaPredicted RBP19.69■□□□□ 0.74
SHKBP1-227ENST00000602011 ZNF707Q96C28 371 aaPredicted RBP19.69■□□□□ 0.74
SHKBP1-227ENST00000602011 TTPALQ9BTX7 342 aa19.69■□□□□ 0.74
SHKBP1-227ENST00000602011 B4GALT5O43286 388 aa19.68■□□□□ 0.74
SHKBP1-227ENST00000602011 LAMP2P13473 410 aa19.68■□□□□ 0.74
SHKBP1-227ENST00000602011 HOXA9P31269 272 aa19.68■□□□□ 0.74
SHKBP1-227ENST00000602011 NAMPTP43490 491 aa19.68■□□□□ 0.74
SHKBP1-227ENST00000602011 PRPF4BQ13523 1007 aaKnown RBP19.68■□□□□ 0.74
SHKBP1-227ENST00000602011 ERICH6BQ5W0A0 696 aa19.68■□□□□ 0.74
SHKBP1-227ENST00000602011 HAUS3Q68CZ6 603 aa19.68■□□□□ 0.74
SHKBP1-227ENST00000602011 PIK3R5Q8WYR1 880 aa19.68■□□□□ 0.74
SHKBP1-227ENST00000602011 LLPHQ9BRT6 129 aaKnown RBP19.68■□□□□ 0.74
SHKBP1-227ENST00000602011 FOXP1Q9H334 677 aaPredicted RBP19.68■□□□□ 0.74
SHKBP1-227ENST00000602011 DCHS1Q96JQ0 3298 aa19.68■□□□□ 0.74
SHKBP1-227ENST00000602011 WDR87Q6ZQQ6 2873 aa19.68■□□□□ 0.74
SHKBP1-227ENST00000602011 POTEMA6NI47 508 aa19.67■□□□□ 0.74
SHKBP1-227ENST00000602011 F8W810 466 aa19.67■□□□□ 0.74
SHKBP1-227ENST00000602011 RFPL2O75678 378 aa19.67■□□□□ 0.74
SHKBP1-227ENST00000602011 TRAPPC10P48553 1259 aa19.67■□□□□ 0.74
SHKBP1-227ENST00000602011 RBM25P49756 843 aaKnown RBP19.67■□□□□ 0.74
SHKBP1-227ENST00000602011 TMEM132AQ24JP5 1023 aa19.67■□□□□ 0.74
SHKBP1-227ENST00000602011 UVSSAQ2YD98 709 aa19.67■□□□□ 0.74
SHKBP1-227ENST00000602011 PHLDB3Q6NSJ2 640 aa19.67■□□□□ 0.74
SHKBP1-227ENST00000602011 PADI6Q6TGC4 694 aa19.67■□□□□ 0.74
SHKBP1-227ENST00000602011 DTWD2Q8NBA8 298 aa19.67■□□□□ 0.74
SHKBP1-227ENST00000602011 ST13P5Q8NFI4 369 aaPredicted RBP19.67■□□□□ 0.74
SHKBP1-227ENST00000602011 IFT74Q96LB3 600 aa19.67■□□□□ 0.74
SHKBP1-227ENST00000602011 KLK14Q9P0G3 267 aa19.67■□□□□ 0.74
SHKBP1-227ENST00000602011 PHLPP2Q6ZVD8 1323 aa19.67■□□□□ 0.74
SHKBP1-227ENST00000602011 ARHGEF35A5YM69 484 aa19.66■□□□□ 0.74
SHKBP1-227ENST00000602011 ANHXE9PGG2 379 aa19.66■□□□□ 0.74
SHKBP1-227ENST00000602011 CFHP08603 1231 aa19.66■□□□□ 0.74
SHKBP1-227ENST00000602011 POU2F2P09086 479 aa19.66■□□□□ 0.74
SHKBP1-227ENST00000602011 RFX1P22670 979 aa19.66■□□□□ 0.74
SHKBP1-227ENST00000602011 MCM7P33993 719 aa19.66■□□□□ 0.74
SHKBP1-227ENST00000602011 ANGPT1Q15389 498 aa19.66■□□□□ 0.74
SHKBP1-227ENST00000602011 DCAF4L1Q3SXM0 396 aa19.66■□□□□ 0.74
SHKBP1-227ENST00000602011 LIN9Q5TKA1 542 aa19.66■□□□□ 0.74
SHKBP1-227ENST00000602011 DEPTORQ8TB45 409 aa19.66■□□□□ 0.74
SHKBP1-227ENST00000602011 KIFAP3Q92845 792 aa19.66■□□□□ 0.74
SHKBP1-227ENST00000602011 BORCS6Q96GS4 357 aa19.66■□□□□ 0.74
SHKBP1-227ENST00000602011 TMEM60Q9H2L4 133 aa19.66■□□□□ 0.74
SHKBP1-227ENST00000602011 STK25O00506 426 aa19.65■□□□□ 0.74
SHKBP1-227ENST00000602011 TRAPPC3O43617 180 aa19.65■□□□□ 0.74
SHKBP1-227ENST00000602011 XYLBO75191 536 aa19.65■□□□□ 0.74
SHKBP1-227ENST00000602011 MED24O75448 989 aa19.65■□□□□ 0.74
SHKBP1-227ENST00000602011 OR52Z1P0C646 297 aa19.65■□□□□ 0.74
SHKBP1-227ENST00000602011 SPATA31D3P0C874 917 aa19.65■□□□□ 0.74
SHKBP1-227ENST00000602011 PDIA5Q14554 519 aa19.65■□□□□ 0.74
SHKBP1-227ENST00000602011 FAM171A1Q5VUB5 890 aa19.65■□□□□ 0.74
SHKBP1-227ENST00000602011 SPATA31D4Q6ZUB0 917 aa19.65■□□□□ 0.74
SHKBP1-227ENST00000602011 MAEAQ7L5Y9 396 aa19.65■□□□□ 0.74
SHKBP1-227ENST00000602011 LNX1Q8TBB1 728 aaPredicted RBP19.65■□□□□ 0.74
SHKBP1-227ENST00000602011 SHDQ96IW2 340 aa19.65■□□□□ 0.74
SHKBP1-227ENST00000602011 C8orf76Q96K31 380 aa19.65■□□□□ 0.74
SHKBP1-227ENST00000602011 UROC1Q96N76 676 aa19.65■□□□□ 0.74
SHKBP1-227ENST00000602011 MYADMQ96S97 322 aa19.65■□□□□ 0.74
SHKBP1-227ENST00000602011 PDZD7Q9H5P4 517 aa19.65■□□□□ 0.74
SHKBP1-227ENST00000602011 GPRC5CQ9NQ84 441 aa19.65■□□□□ 0.74
SHKBP1-227ENST00000602011 SLC2A4RGQ9NR83 387 aa19.65■□□□□ 0.74
SHKBP1-227ENST00000602011 KCNG1Q9UIX4 513 aa19.65■□□□□ 0.74
SHKBP1-227ENST00000602011 LIMCH1Q9UPQ0 1083 aa19.65■□□□□ 0.74
SHKBP1-227ENST00000602011 KRBA1A5PL33 1030 aa19.64■□□□□ 0.73
SHKBP1-227ENST00000602011 TMEM189-UBE2V1I3L0A0 370 aa19.64■□□□□ 0.73
SHKBP1-227ENST00000602011 JAK2O60674 1132 aa19.64■□□□□ 0.73
SHKBP1-227ENST00000602011 DTNBO60941 627 aa19.64■□□□□ 0.73
SHKBP1-227ENST00000602011 PRKCBP05771 671 aa19.64■□□□□ 0.73
SHKBP1-227ENST00000602011 FSHRP23945 695 aa19.64■□□□□ 0.73
SHKBP1-227ENST00000602011 HMGN5P82970 282 aaKnown RBP19.64■□□□□ 0.73
SHKBP1-227ENST00000602011 DCLRE1AQ6PJP8 1040 aa19.64■□□□□ 0.73
SHKBP1-227ENST00000602011 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms