RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 FRMD3A2A2Y4 597 aa18.45■□□□□ 0.54
TRIM28-215ENST00000601150 CLDN3O15551 220 aa18.45■□□□□ 0.54
TRIM28-215ENST00000601150 NR1I2O75469 434 aa18.45■□□□□ 0.54
TRIM28-215ENST00000601150 PIGRP01833 764 aa18.45■□□□□ 0.54
TRIM28-215ENST00000601150 HARSP12081 509 aaKnown RBP18.45■□□□□ 0.54
TRIM28-215ENST00000601150 CMA1P23946 247 aa18.45■□□□□ 0.54
TRIM28-215ENST00000601150 MATR3P43243 847 aaKnown RBP eCLIP18.45■□□□□ 0.54
TRIM28-215ENST00000601150 LIG4P49917 911 aa18.45■□□□□ 0.54
TRIM28-215ENST00000601150 ERVFC1P60507 584 aa18.45■□□□□ 0.54
TRIM28-215ENST00000601150 NOLC1Q14978 699 aaKnown RBP eCLIP18.45■□□□□ 0.545e-7■■□□□ 14.3
TRIM28-215ENST00000601150 HERC4Q5GLZ8 1057 aaPredicted RBP18.45■□□□□ 0.54
TRIM28-215ENST00000601150 ZNF720Q7Z2F6 126 aa18.45■□□□□ 0.54
TRIM28-215ENST00000601150 TMEM173Q86WV6 379 aaPredicted RBP18.45■□□□□ 0.54
TRIM28-215ENST00000601150 CCDC65Q8IXS2 484 aa18.45■□□□□ 0.54
TRIM28-215ENST00000601150 CEP120Q8N960 986 aa18.45■□□□□ 0.54
TRIM28-215ENST00000601150 HVCN1Q96D96 273 aa18.45■□□□□ 0.54
TRIM28-215ENST00000601150 MRPL44Q9H9J2 332 aaKnown RBP18.45■□□□□ 0.54
TRIM28-215ENST00000601150 OLFML3Q9NRN5 406 aa18.45■□□□□ 0.54
TRIM28-215ENST00000601150 TOPORSQ9NS56 1045 aaPredicted RBP18.45■□□□□ 0.54
TRIM28-215ENST00000601150 PTGESO14684 152 aa18.44■□□□□ 0.54
TRIM28-215ENST00000601150 NRP1O14786 923 aa18.44■□□□□ 0.54
TRIM28-215ENST00000601150 FSCN2O14926 492 aa18.44■□□□□ 0.54
TRIM28-215ENST00000601150 HNRNPDLO14979 420 aaKnown RBP18.44■□□□□ 0.54
TRIM28-215ENST00000601150 THP07101 528 aa18.44■□□□□ 0.54
TRIM28-215ENST00000601150 OR1G1P47890 313 aa18.44■□□□□ 0.54
TRIM28-215ENST00000601150 YARSP54577 528 aaKnown RBP18.44■□□□□ 0.54
TRIM28-215ENST00000601150 OSTNP61366 133 aa18.44■□□□□ 0.54
TRIM28-215ENST00000601150 MCL1Q07820 350 aa18.44■□□□□ 0.54
TRIM28-215ENST00000601150 ZC2HC1CQ53FD0 456 aaPredicted RBP18.44■□□□□ 0.54
TRIM28-215ENST00000601150 CNNM4Q6P4Q7 775 aa18.44■□□□□ 0.54
TRIM28-215ENST00000601150 DDX53Q86TM3 631 aaKnown RBP18.44■□□□□ 0.54
TRIM28-215ENST00000601150 MAP4K3Q8IVH8 894 aa18.44■□□□□ 0.54
TRIM28-215ENST00000601150 CEP57L1Q8IYX8 460 aa18.44■□□□□ 0.54
TRIM28-215ENST00000601150 BCL7CQ8WUZ0 217 aaPredicted RBP18.44■□□□□ 0.54
TRIM28-215ENST00000601150 HLA-CQ95604 372 aa18.44■□□□□ 0.54
TRIM28-215ENST00000601150 TCF25Q9BQ70 676 aa18.44■□□□□ 0.54
TRIM28-215ENST00000601150 TRIM9Q9C026 710 aa18.44■□□□□ 0.54
TRIM28-215ENST00000601150 ENTPD7Q9NQZ7 604 aa18.44■□□□□ 0.54
TRIM28-215ENST00000601150 STK39Q9UEW8 545 aa18.44■□□□□ 0.54
TRIM28-215ENST00000601150 PCDHGC5Q9Y5F6 944 aa18.44■□□□□ 0.54
TRIM28-215ENST00000601150 A0A1B0GVL5 298 aa18.43■□□□□ 0.54
TRIM28-215ENST00000601150 NCK2O43639 380 aa18.43■□□□□ 0.54
TRIM28-215ENST00000601150 PFKFB1P16118 471 aa18.43■□□□□ 0.54
TRIM28-215ENST00000601150 HYAL1Q12794 435 aa18.43■□□□□ 0.54
TRIM28-215ENST00000601150 BMS1Q14692 1282 aaKnown RBP18.43■□□□□ 0.54
TRIM28-215ENST00000601150 TMC7Q7Z402 723 aa18.43■□□□□ 0.54
TRIM28-215ENST00000601150 ADGRD2Q7Z7M1 963 aa18.43■□□□□ 0.54
TRIM28-215ENST00000601150 ATXN2LQ8WWM7 1075 aaKnown RBP18.43■□□□□ 0.54
TRIM28-215ENST00000601150 ACAP3Q96P50 834 aa18.43■□□□□ 0.54
TRIM28-215ENST00000601150 C7orf25Q9BPX7 421 aa18.43■□□□□ 0.54
TRIM28-215ENST00000601150 CXCL16Q9H2A7 254 aa18.43■□□□□ 0.54
TRIM28-215ENST00000601150 NGRNQ9NPE2 291 aaKnown RBP18.43■□□□□ 0.54
TRIM28-215ENST00000601150 TBC1D7Q9P0N9 293 aa18.43■□□□□ 0.54
TRIM28-215ENST00000601150 PRG3Q9Y2Y8 225 aaPredicted RBP18.43■□□□□ 0.54
TRIM28-215ENST00000601150 A0A1W2PQ27 194 aa18.42■□□□□ 0.54
TRIM28-215ENST00000601150 A0A1W2PQ64 194 aa18.42■□□□□ 0.54
TRIM28-215ENST00000601150 A0A1W2PQD8 194 aa18.42■□□□□ 0.54
TRIM28-215ENST00000601150 PPP1R37O75864 691 aa18.42■□□□□ 0.54
TRIM28-215ENST00000601150 GCNT3O95395 438 aa18.42■□□□□ 0.54
TRIM28-215ENST00000601150 SLFN14P0C7P3 912 aa18.42■□□□□ 0.54
TRIM28-215ENST00000601150 ANP32AP39687 249 aaKnown RBP18.42■□□□□ 0.54
TRIM28-215ENST00000601150 ASIC1P78348 528 aa18.42■□□□□ 0.54
TRIM28-215ENST00000601150 TUSC3Q13454 348 aa18.42■□□□□ 0.54
TRIM28-215ENST00000601150 ALCAMQ13740 583 aa18.42■□□□□ 0.54
TRIM28-215ENST00000601150 SMC1AQ14683 1233 aaKnown RBP18.42■□□□□ 0.54
TRIM28-215ENST00000601150 COL19A1Q14993 1142 aa18.42■□□□□ 0.54
TRIM28-215ENST00000601150 AAK1Q2M2I8 961 aa18.42■□□□□ 0.54
TRIM28-215ENST00000601150 PLPP4Q5VZY2 271 aa18.42■□□□□ 0.54
TRIM28-215ENST00000601150 VPS52Q8N1B4 723 aa18.42■□□□□ 0.54
TRIM28-215ENST00000601150 PABPC5Q96DU9 382 aaKnown RBP18.42■□□□□ 0.54
TRIM28-215ENST00000601150 COLEC11Q9BWP8 271 aa18.42■□□□□ 0.54
TRIM28-215ENST00000601150 STRA6Q9BX79 667 aa18.42■□□□□ 0.54
TRIM28-215ENST00000601150 HAPLN2Q9GZV7 340 aa18.42■□□□□ 0.54
TRIM28-215ENST00000601150 UBE2ZQ9H832 354 aaPredicted RBP18.42■□□□□ 0.54
TRIM28-215ENST00000601150 GDPD2Q9HCC8 539 aa18.42■□□□□ 0.54
TRIM28-215ENST00000601150 USP25Q9UHP3 1055 aa18.42■□□□□ 0.54
TRIM28-215ENST00000601150 SERTAD1Q9UHV2 236 aa18.42■□□□□ 0.54
TRIM28-215ENST00000601150 HPSEQ9Y251 543 aa18.42■□□□□ 0.54
TRIM28-215ENST00000601150 PCDHB13Q9Y5F0 798 aa18.42■□□□□ 0.54
TRIM28-215ENST00000601150 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.41■□□□□ 0.54
TRIM28-215ENST00000601150 NRIP1P48552 1158 aa18.41■□□□□ 0.54
TRIM28-215ENST00000601150 MRPS5P82675 430 aaKnown RBP18.41■□□□□ 0.54
TRIM28-215ENST00000601150 COASYQ13057 564 aa18.41■□□□□ 0.54
TRIM28-215ENST00000601150 KYAT1Q16773 422 aa18.41■□□□□ 0.54
TRIM28-215ENST00000601150 XKR4Q5GH76 650 aa18.41■□□□□ 0.54
TRIM28-215ENST00000601150 SNX27Q96L92 541 aa18.41■□□□□ 0.54
TRIM28-215ENST00000601150 PPP1R10Q96QC0 940 aaKnown RBP18.41■□□□□ 0.54
TRIM28-215ENST00000601150 ACCSQ96QU6 501 aa18.41■□□□□ 0.54
TRIM28-215ENST00000601150 ZBP1Q9H171 429 aa18.41■□□□□ 0.54
TRIM28-215ENST00000601150 IGFLR1Q9H665 355 aa18.41■□□□□ 0.54
TRIM28-215ENST00000601150 TLE6Q9H808 572 aa18.41■□□□□ 0.54
TRIM28-215ENST00000601150 MARCH5Q9NX47 278 aa18.41■□□□□ 0.54
TRIM28-215ENST00000601150 CIZ1Q9ULV3 898 aaPredicted RBP18.41■□□□□ 0.54
TRIM28-215ENST00000601150 EXOC7Q9UPT5 735 aa18.41■□□□□ 0.54
TRIM28-215ENST00000601150 PRUNE2Q8WUY3 3088 aa18.41■□□□□ 0.54
TRIM28-215ENST00000601150 BRWD1Q9NSI6 2320 aa18.41■□□□□ 0.54
TRIM28-215ENST00000601150 A0A0B4J269 797 aa18.4■□□□□ 0.54
TRIM28-215ENST00000601150 FAM237AA0A1B0GTK4 181 aa18.4■□□□□ 0.54
TRIM28-215ENST00000601150 FSD2A1L4K1 749 aa18.4■□□□□ 0.54
TRIM28-215ENST00000601150 ANKRD63C9JTQ0 380 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms