RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 AGO3Q9H9G7 860 aaKnown RBP12.75□□□□□ -0.37
CHMP2A-207ENST00000600804 ERVK-5Q9HDB9 667 aa12.75□□□□□ -0.37
CHMP2A-207ENST00000600804 TYW1Q9NV66 732 aaKnown RBP12.75□□□□□ -0.37
CHMP2A-207ENST00000600804 PADI3Q9ULW8 664 aa12.75□□□□□ -0.37
CHMP2A-207ENST00000600804 TRAF3IP3Q9Y228 551 aa12.75□□□□□ -0.37
CHMP2A-207ENST00000600804 TNFSF13BQ9Y275 285 aa12.75□□□□□ -0.37
CHMP2A-207ENST00000600804 FNDC1Q4ZHG4 1894 aaPredicted RBP12.74□□□□□ -0.37
CHMP2A-207ENST00000600804 ZMYM2Q9UBW7 1377 aa12.74□□□□□ -0.37
CHMP2A-207ENST00000600804 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.74□□□□□ -0.37
CHMP2A-207ENST00000600804 GRXCR2A6NFK2 248 aa12.74□□□□□ -0.37
CHMP2A-207ENST00000600804 H3BQ06 376 aaPredicted RBP12.74□□□□□ -0.37
CHMP2A-207ENST00000600804 BIN1O00499 593 aa12.74□□□□□ -0.37
CHMP2A-207ENST00000600804 KIAA0391O15091 583 aaKnown RBP12.74□□□□□ -0.37
CHMP2A-207ENST00000600804 TGFB1I1O43294 461 aa12.74□□□□□ -0.37
CHMP2A-207ENST00000600804 TOM1L1O75674 476 aa12.74□□□□□ -0.37
CHMP2A-207ENST00000600804 ERLIN2O94905 339 aa12.74□□□□□ -0.37
CHMP2A-207ENST00000600804 PRPF6O94906 941 aaKnown RBP12.74□□□□□ -0.37
CHMP2A-207ENST00000600804 GHRP10912 638 aa12.74□□□□□ -0.37
CHMP2A-207ENST00000600804 ARF4P18085 180 aaPredicted RBP12.74□□□□□ -0.37
CHMP2A-207ENST00000600804 ERCC5P28715 1186 aaPredicted RBP12.74□□□□□ -0.37
CHMP2A-207ENST00000600804 ZNF445P59923 1031 aa12.74□□□□□ -0.37
CHMP2A-207ENST00000600804 LRRC63Q05C16 580 aa12.74□□□□□ -0.37
CHMP2A-207ENST00000600804 TYRO3Q06418 890 aa12.74□□□□□ -0.37
CHMP2A-207ENST00000600804 KCNA1Q09470 495 aa12.74□□□□□ -0.37
CHMP2A-207ENST00000600804 PAK2Q13177 524 aa12.74□□□□□ -0.37
CHMP2A-207ENST00000600804 PRPF4BQ13523 1007 aaKnown RBP12.74□□□□□ -0.37
CHMP2A-207ENST00000600804 ZCWPW2Q504Y3 356 aa12.74□□□□□ -0.37
CHMP2A-207ENST00000600804 SLFN12LQ6IEE8 588 aa12.74□□□□□ -0.37
CHMP2A-207ENST00000600804 PTCRAQ6ISU1 281 aaPredicted RBP12.74□□□□□ -0.37
CHMP2A-207ENST00000600804 SLC9A9Q8IVB4 645 aa12.74□□□□□ -0.37
CHMP2A-207ENST00000600804 FBXO22Q8NEZ5 403 aa12.74□□□□□ -0.37
CHMP2A-207ENST00000600804 ZNF668Q96K58 619 aaPredicted RBP12.74□□□□□ -0.37
CHMP2A-207ENST00000600804 PPP1R16BQ96T49 567 aa12.74□□□□□ -0.37
CHMP2A-207ENST00000600804 ST3GAL5Q9UNP4 418 aa12.74□□□□□ -0.37
CHMP2A-207ENST00000600804 SYCE3A1L190 88 aa12.73□□□□□ -0.37
CHMP2A-207ENST00000600804 PRR33A8MZF0 331 aa12.73□□□□□ -0.37
CHMP2A-207ENST00000600804 ABLIM1O14639 778 aa12.73□□□□□ -0.37
CHMP2A-207ENST00000600804 HNRNPDLO14979 420 aaKnown RBP12.73□□□□□ -0.37
CHMP2A-207ENST00000600804 N4BP3O15049 544 aa12.73□□□□□ -0.37
CHMP2A-207ENST00000600804 EDN1P05305 212 aa12.73□□□□□ -0.37
CHMP2A-207ENST00000600804 LINC00271P0C7V0 271 aa12.73□□□□□ -0.37
CHMP2A-207ENST00000600804 CD44P16070 742 aaKnown RBP12.73□□□□□ -0.37
CHMP2A-207ENST00000600804 GARTP22102 1010 aa12.73□□□□□ -0.37
CHMP2A-207ENST00000600804 CCNE1P24864 410 aa12.73□□□□□ -0.37
CHMP2A-207ENST00000600804 CD52P31358 61 aa12.73□□□□□ -0.37
CHMP2A-207ENST00000600804 POU5F1Q01860 360 aaKnown RBP12.73□□□□□ -0.37
CHMP2A-207ENST00000600804 MCL1Q07820 350 aa12.73□□□□□ -0.37
CHMP2A-207ENST00000600804 HSP90AA2PQ14568 343 aaPredicted RBP12.73□□□□□ -0.37
CHMP2A-207ENST00000600804 DSC3Q14574 896 aa12.73□□□□□ -0.37
CHMP2A-207ENST00000600804 COL19A1Q14993 1142 aa12.73□□□□□ -0.37
CHMP2A-207ENST00000600804 EDRF1Q3B7T1 1238 aa12.73□□□□□ -0.37
CHMP2A-207ENST00000600804 DPCR1Q3MIW9 517 aa12.73□□□□□ -0.37
CHMP2A-207ENST00000600804 EPC2Q52LR7 807 aa12.73□□□□□ -0.37
CHMP2A-207ENST00000600804 ATF7IP2Q5U623 682 aa12.73□□□□□ -0.37
CHMP2A-207ENST00000600804 NOTUMQ6P988 496 aa12.73□□□□□ -0.37
CHMP2A-207ENST00000600804 HS2ST1Q7LGA3 356 aa12.73□□□□□ -0.37
CHMP2A-207ENST00000600804 APBB1IPQ7Z5R6 666 aaPredicted RBP12.73□□□□□ -0.37
CHMP2A-207ENST00000600804 ALYREFQ86V81 257 aaKnown RBP12.73□□□□□ -0.37
CHMP2A-207ENST00000600804 ZC3H3Q8IXZ2 948 aaKnown RBP12.73□□□□□ -0.37
CHMP2A-207ENST00000600804 SMYD4Q8IYR2 804 aaPredicted RBP12.73□□□□□ -0.37
CHMP2A-207ENST00000600804 SEPT8Q92599 483 aa12.73□□□□□ -0.37
CHMP2A-207ENST00000600804 MRPL38Q96DV4 380 aaKnown RBP12.73□□□□□ -0.37
CHMP2A-207ENST00000600804 BPIFA3Q9BQP9 254 aa12.73□□□□□ -0.37
CHMP2A-207ENST00000600804 IFIH1Q9BYX4 1025 aaKnown RBP12.73□□□□□ -0.37
CHMP2A-207ENST00000600804 RWDD2AQ9UIY3 292 aa12.73□□□□□ -0.37
CHMP2A-207ENST00000600804 INSL6Q9Y581 213 aa12.73□□□□□ -0.37
CHMP2A-207ENST00000600804 CITO14578 2027 aa12.72□□□□□ -0.37
CHMP2A-207ENST00000600804 BICDL2A1A5D9 508 aa12.72□□□□□ -0.37
CHMP2A-207ENST00000600804 B4GALT5O43286 388 aa12.72□□□□□ -0.37
CHMP2A-207ENST00000600804 EFCAB14O75071 495 aa12.72□□□□□ -0.37
CHMP2A-207ENST00000600804 CSDE1O75534 798 aaKnown RBP12.72□□□□□ -0.37
CHMP2A-207ENST00000600804 LTBRP36941 435 aa12.72□□□□□ -0.37
CHMP2A-207ENST00000600804 LIG4P49917 911 aa12.72□□□□□ -0.37
CHMP2A-207ENST00000600804 PAK1Q13153 545 aa12.72□□□□□ -0.37
CHMP2A-207ENST00000600804 KYAT1Q16773 422 aa12.72□□□□□ -0.37
CHMP2A-207ENST00000600804 DCAF4L1Q3SXM0 396 aa12.72□□□□□ -0.37
CHMP2A-207ENST00000600804 TCEAL5Q5H9L2 206 aa12.72□□□□□ -0.37
CHMP2A-207ENST00000600804 ISM2Q6H9L7 571 aa12.72□□□□□ -0.37
CHMP2A-207ENST00000600804 SLC39A4Q6P5W5 647 aa12.72□□□□□ -0.37
CHMP2A-207ENST00000600804 MPZL3Q6UWV2 235 aa12.72□□□□□ -0.37
CHMP2A-207ENST00000600804 SYCP3Q8IZU3 236 aa12.72□□□□□ -0.37
CHMP2A-207ENST00000600804 P2RX5Q93086 422 aa12.72□□□□□ -0.37
CHMP2A-207ENST00000600804 TARS2Q9BW92 718 aaKnown RBP12.72□□□□□ -0.37
CHMP2A-207ENST00000600804 TMX1Q9H3N1 280 aa12.72□□□□□ -0.37
CHMP2A-207ENST00000600804 PDZD7Q9H5P4 517 aa12.72□□□□□ -0.37
CHMP2A-207ENST00000600804 AGPAT3Q9NRZ7 376 aa12.72□□□□□ -0.37
CHMP2A-207ENST00000600804 DMAC2Q9NW81 257 aa12.72□□□□□ -0.37
CHMP2A-207ENST00000600804 CFAP54Q96N23 3096 aa12.72□□□□□ -0.37
CHMP2A-207ENST00000600804 A0A0B4J269 797 aa12.71□□□□□ -0.37
CHMP2A-207ENST00000600804 TTLL13PA6NNM8 815 aa12.71□□□□□ -0.37
CHMP2A-207ENST00000600804 H3BNC9 293 aa12.71□□□□□ -0.37
CHMP2A-207ENST00000600804 CLDN3O15551 220 aa12.71□□□□□ -0.37
CHMP2A-207ENST00000600804 CALUO43852 315 aaPredicted RBP12.71□□□□□ -0.37
CHMP2A-207ENST00000600804 ZNF623O75123 536 aa12.71□□□□□ -0.37
CHMP2A-207ENST00000600804 MCF2P10911 925 aa12.71□□□□□ -0.37
CHMP2A-207ENST00000600804 SKIP12755 728 aa12.71□□□□□ -0.37
CHMP2A-207ENST00000600804 ZSCAN20P17040 1043 aaPredicted RBP12.71□□□□□ -0.37
CHMP2A-207ENST00000600804 FGFR4P22455 802 aa12.71□□□□□ -0.37
CHMP2A-207ENST00000600804 ADSSP30520 456 aa12.71□□□□□ -0.37
CHMP2A-207ENST00000600804 RAB27AP51159 221 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms