RNA–Protein interactions for RNA: ENST00000600456.1

SNRPA-208, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-208ENST00000600456 MYLIPQ8WY64 445 aa15.1■□□□□ 0.01
SNRPA-208ENST00000600456 ZBTB45Q96K62 511 aaPredicted RBP15.1■□□□□ 0.01
SNRPA-208ENST00000600456 ZFP42Q96MM3 310 aa15.1■□□□□ 0.01
SNRPA-208ENST00000600456 FAM193BQ96PV7 902 aaPredicted RBP15.1■□□□□ 0.01
SNRPA-208ENST00000600456 TMEM175Q9BSA9 504 aa15.1■□□□□ 0.01
SNRPA-208ENST00000600456 LMAN2LQ9H0V9 348 aa15.1■□□□□ 0.01
SNRPA-208ENST00000600456 EXOC1Q9NV70 894 aa15.1■□□□□ 0.01
SNRPA-208ENST00000600456 HCSTQ9UBK5 93 aa15.1■□□□□ 0.01
SNRPA-208ENST00000600456 HOOK1Q9UJC3 728 aaKnown RBP15.1■□□□□ 0.01
SNRPA-208ENST00000600456 STXBP5LQ9Y2K9 1186 aa15.1■□□□□ 0.01
SNRPA-208ENST00000600456 CHD7Q9P2D1 2997 aa15.09■□□□□ 0.01
SNRPA-208ENST00000600456 SZT2Q5T011 3432 aa15.09■□□□□ 0.01
SNRPA-208ENST00000600456 OGTO15294 1046 aa15.09■□□□□ 0.01
SNRPA-208ENST00000600456 LPXNO60711 386 aa15.09■□□□□ 0.01
SNRPA-208ENST00000600456 POMCP01189 267 aa15.09■□□□□ 0.01
SNRPA-208ENST00000600456 RPN1P04843 607 aaKnown RBP15.09■□□□□ 0.01
SNRPA-208ENST00000600456 CLTAP09496 248 aa15.09■□□□□ 0.01
SNRPA-208ENST00000600456 HARSP12081 509 aaKnown RBP15.09■□□□□ 0.01
SNRPA-208ENST00000600456 FOSL2P15408 326 aa15.09■□□□□ 0.01
SNRPA-208ENST00000600456 SCNN1GP51170 649 aa15.09■□□□□ 0.01
SNRPA-208ENST00000600456 AFF1P51825 1210 aaKnown RBP15.09■□□□□ 0.01
SNRPA-208ENST00000600456 BCAR1P56945 870 aa15.09■□□□□ 0.01
SNRPA-208ENST00000600456 UBE3AQ05086 875 aa15.09■□□□□ 0.01
SNRPA-208ENST00000600456 DSC1Q08554 894 aa15.09■□□□□ 0.01
SNRPA-208ENST00000600456 DPYDQ12882 1025 aa15.09■□□□□ 0.01
SNRPA-208ENST00000600456 POSTNQ15063 836 aa15.09■□□□□ 0.01
SNRPA-208ENST00000600456 PTPROQ16827 1216 aa15.09■□□□□ 0.01
SNRPA-208ENST00000600456 SLC39A4Q6P5W5 647 aa15.09■□□□□ 0.01
SNRPA-208ENST00000600456 ELOA2Q8IYF1 753 aaPredicted RBP15.09■□□□□ 0.01
SNRPA-208ENST00000600456 SYCP3Q8IZU3 236 aa15.09■□□□□ 0.01
SNRPA-208ENST00000600456 CEP120Q8N960 986 aa15.09■□□□□ 0.01
SNRPA-208ENST00000600456 GSTCDQ8NEC7 633 aa15.09■□□□□ 0.01
SNRPA-208ENST00000600456 ZNF507Q8TCN5 953 aa15.09■□□□□ 0.01
SNRPA-208ENST00000600456 HPS3Q969F9 1004 aa15.09■□□□□ 0.01
SNRPA-208ENST00000600456 ACAP3Q96P50 834 aa15.09■□□□□ 0.01
SNRPA-208ENST00000600456 MSTO1Q9BUK6 570 aa15.09■□□□□ 0.01
SNRPA-208ENST00000600456 FGFBP2Q9BYJ0 223 aa15.09■□□□□ 0.01
SNRPA-208ENST00000600456 NRDE2Q9H7Z3 1164 aa15.09■□□□□ 0.01
SNRPA-208ENST00000600456 SPG21Q9NZD8 308 aa15.09■□□□□ 0.01
SNRPA-208ENST00000600456 KLK14Q9P0G3 267 aa15.09■□□□□ 0.01
SNRPA-208ENST00000600456 PLAGL2Q9UPG8 496 aa15.09■□□□□ 0.01
SNRPA-208ENST00000600456 GDAQ9Y2T3 454 aa15.09■□□□□ 0.01
SNRPA-208ENST00000600456 ANKRD63C9JTQ0 380 aa15.08■□□□□ 0
SNRPA-208ENST00000600456 RFXAPO00287 272 aa15.08■□□□□ 0
SNRPA-208ENST00000600456 KINO60870 393 aaKnown RBP15.08■□□□□ 0
SNRPA-208ENST00000600456 ZC3H11AO75152 810 aaKnown RBP eCLIP15.08■□□□□ 0
SNRPA-208ENST00000600456 GADD45BO75293 160 aaPredicted RBP15.08■□□□□ 0
SNRPA-208ENST00000600456 NR1I2O75469 434 aa15.08■□□□□ 0
SNRPA-208ENST00000600456 POU5F1Q01860 360 aaKnown RBP15.08■□□□□ 0
SNRPA-208ENST00000600456 PLCB3Q01970 1234 aa15.08■□□□□ 0
SNRPA-208ENST00000600456 KCNA1Q09470 495 aa15.08■□□□□ 0
SNRPA-208ENST00000600456 ADGRE1Q14246 886 aa15.08■□□□□ 0
SNRPA-208ENST00000600456 KCNB1Q14721 858 aa15.08■□□□□ 0
SNRPA-208ENST00000600456 BMT2Q1RMZ1 405 aa15.08■□□□□ 0
SNRPA-208ENST00000600456 KMT5BQ4FZB7 885 aa15.08■□□□□ 0
SNRPA-208ENST00000600456 XKR4Q5GH76 650 aa15.08■□□□□ 0
SNRPA-208ENST00000600456 ZNF280BQ86YH2 543 aa15.08■□□□□ 0
SNRPA-208ENST00000600456 THNSL1Q8IYQ7 743 aa15.08■□□□□ 0
SNRPA-208ENST00000600456 SLC39A11Q8N1S5 342 aa15.08■□□□□ 0
SNRPA-208ENST00000600456 KLHL23Q8NBE8 558 aa15.08■□□□□ 0
SNRPA-208ENST00000600456 MRPL38Q96DV4 380 aaKnown RBP15.08■□□□□ 0
SNRPA-208ENST00000600456 SNX27Q96L92 541 aa15.08■□□□□ 0
SNRPA-208ENST00000600456 GBP4Q96PP9 640 aa15.08■□□□□ 0
SNRPA-208ENST00000600456 HAPLN2Q9GZV7 340 aa15.08■□□□□ 0
SNRPA-208ENST00000600456 PLEKHA5Q9HAU0 1116 aa15.08■□□□□ 0
SNRPA-208ENST00000600456 STK39Q9UEW8 545 aa15.08■□□□□ 0
SNRPA-208ENST00000600456 LZTS1Q9Y250 596 aa15.08■□□□□ 0
SNRPA-208ENST00000600456 PTGESO14684 152 aa15.07■□□□□ 0
SNRPA-208ENST00000600456 KIAA0391O15091 583 aaKnown RBP15.07■□□□□ 0
SNRPA-208ENST00000600456 FAM189A1O60320 539 aa15.07■□□□□ 0
SNRPA-208ENST00000600456 PRPF40AO75400 957 aaKnown RBP15.07■□□□□ 0
SNRPA-208ENST00000600456 FGF18O76093 207 aa15.07■□□□□ 0
SNRPA-208ENST00000600456 DDHD2O94830 711 aa15.07■□□□□ 0
SNRPA-208ENST00000600456 PRPF6O94906 941 aaKnown RBP15.07■□□□□ 0
SNRPA-208ENST00000600456 RHOBTB3O94955 611 aa15.07■□□□□ 0
SNRPA-208ENST00000600456 ALDH2P05091 517 aa15.07■□□□□ 0
SNRPA-208ENST00000600456 ITGB1P05556 798 aa15.07■□□□□ 0
SNRPA-208ENST00000600456 THP07101 528 aa15.07■□□□□ 0
SNRPA-208ENST00000600456 GALTP07902 379 aa15.07■□□□□ 0
SNRPA-208ENST00000600456 PRR29P0C7W0 189 aa15.07■□□□□ 0
SNRPA-208ENST00000600456 GARTP22102 1010 aa15.07■□□□□ 0
SNRPA-208ENST00000600456 IGFBP4P22692 258 aa15.07■□□□□ 0
SNRPA-208ENST00000600456 OSTNP61366 133 aa15.07■□□□□ 0
SNRPA-208ENST00000600456 SNRPFP62306 86 aaKnown RBP15.07■□□□□ 0
SNRPA-208ENST00000600456 KRT17Q04695 432 aa15.07■□□□□ 0
SNRPA-208ENST00000600456 TUSC3Q13454 348 aa15.07■□□□□ 0
SNRPA-208ENST00000600456 ALKAL1Q6UXT8 129 aa15.07■□□□□ 0
SNRPA-208ENST00000600456 COLGALT2Q8IYK4 626 aa15.07■□□□□ 0
SNRPA-208ENST00000600456 GLIS3Q8NEA6 775 aa15.07■□□□□ 0
SNRPA-208ENST00000600456 SCFD1Q8WVM8 642 aa15.07■□□□□ 0
SNRPA-208ENST00000600456 POMGNT1Q8WZA1 660 aa15.07■□□□□ 0
SNRPA-208ENST00000600456 TSPAN18Q96SJ8 248 aa15.07■□□□□ 0
SNRPA-208ENST00000600456 GBP3Q9H0R5 595 aa15.07■□□□□ 0
SNRPA-208ENST00000600456 SLC39A2Q9NP94 309 aa15.07■□□□□ 0
SNRPA-208ENST00000600456 SLC38A7Q9NVC3 462 aa15.07■□□□□ 0
SNRPA-208ENST00000600456 RMND1Q9NWS8 449 aa15.07■□□□□ 0
SNRPA-208ENST00000600456 MIOSQ9NXC5 875 aa15.07■□□□□ 0
SNRPA-208ENST00000600456 PUF60Q9UHX1 559 aaKnown RBP15.07■□□□□ 0
SNRPA-208ENST00000600456 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.07■□□□□ 0
SNRPA-208ENST00000600456 MTCH2Q9Y6C9 303 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms