RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 TTI2Q6NXR4 508 aa21.83■■□□□ 1.09
SHKBP1-222ENST00000600320 GOLGA5Q8TBA6 731 aa21.83■■□□□ 1.09
SHKBP1-222ENST00000600320 DUSP9Q99956 384 aaKnown RBP21.83■■□□□ 1.09
SHKBP1-222ENST00000600320 FAM213AQ9BRX8 229 aa21.83■■□□□ 1.09
SHKBP1-222ENST00000600320 CCDC94Q9BW85 323 aaPredicted RBP21.83■■□□□ 1.09
SHKBP1-222ENST00000600320 MTIF3Q9H2K0 278 aaKnown RBP21.83■■□□□ 1.09
SHKBP1-222ENST00000600320 ANO10Q9NW15 660 aa21.83■■□□□ 1.09
SHKBP1-222ENST00000600320 KLK14Q9P0G3 267 aa21.83■■□□□ 1.09
SHKBP1-222ENST00000600320 PARP2Q9UGN5 583 aa21.83■■□□□ 1.09
SHKBP1-222ENST00000600320 CPSF3Q9UKF6 684 aaKnown RBP21.83■■□□□ 1.09
SHKBP1-222ENST00000600320 LRFN2Q9ULH4 789 aa21.83■■□□□ 1.09
SHKBP1-222ENST00000600320 COL4A6Q14031 1691 aa21.82■■□□□ 1.08
SHKBP1-222ENST00000600320 NFIL3Q16649 462 aa21.82■■□□□ 1.08
SHKBP1-222ENST00000600320 FAM109BQ6ICB4 259 aaPredicted RBP21.82■■□□□ 1.08
SHKBP1-222ENST00000600320 SLC9A9Q8IVB4 645 aa21.82■■□□□ 1.08
SHKBP1-222ENST00000600320 GPD1LQ8N335 351 aa21.82■■□□□ 1.08
SHKBP1-222ENST00000600320 PGBD4Q96DM1 585 aa21.82■■□□□ 1.08
SHKBP1-222ENST00000600320 SLC9A7Q96T83 725 aa21.82■■□□□ 1.08
SHKBP1-222ENST00000600320 GZF1Q9H116 711 aaPredicted RBP21.82■■□□□ 1.08
SHKBP1-222ENST00000600320 EXTL3O43909 919 aa21.81■■□□□ 1.08
SHKBP1-222ENST00000600320 CLTAP09496 248 aa21.81■■□□□ 1.08
SHKBP1-222ENST00000600320 CXCL8P10145 99 aa21.81■■□□□ 1.08
SHKBP1-222ENST00000600320 ATP2A2P16615 1042 aaKnown RBP21.81■■□□□ 1.08
SHKBP1-222ENST00000600320 CASP4P49662 377 aa21.81■■□□□ 1.08
SHKBP1-222ENST00000600320 AFF1P51825 1210 aaKnown RBP21.81■■□□□ 1.08
SHKBP1-222ENST00000600320 WNT7BP56706 349 aa21.81■■□□□ 1.08
SHKBP1-222ENST00000600320 EDRF1Q3B7T1 1238 aa21.81■■□□□ 1.08
SHKBP1-222ENST00000600320 CBWD2Q8IUF1 395 aa21.81■■□□□ 1.08
SHKBP1-222ENST00000600320 HERC6Q8IVU3 1022 aa21.81■■□□□ 1.08
SHKBP1-222ENST00000600320 ZC3H3Q8IXZ2 948 aaKnown RBP21.81■■□□□ 1.08
SHKBP1-222ENST00000600320 XXYLT1Q8NBI6 393 aa21.81■■□□□ 1.08
SHKBP1-222ENST00000600320 NOC3LQ8WTT2 800 aaKnown RBP21.81■■□□□ 1.08
SHKBP1-222ENST00000600320 FBXL18Q96ME1 805 aa21.81■■□□□ 1.08
SHKBP1-222ENST00000600320 ACAP3Q96P50 834 aa21.81■■□□□ 1.08
SHKBP1-222ENST00000600320 GAD1Q99259 594 aa21.81■■□□□ 1.08
SHKBP1-222ENST00000600320 TSG101Q99816 390 aa21.81■■□□□ 1.08
SHKBP1-222ENST00000600320 DNAJC25Q9H1X3 360 aa21.81■■□□□ 1.08
SHKBP1-222ENST00000600320 RSAD1Q9HA92 442 aa21.81■■□□□ 1.08
SHKBP1-222ENST00000600320 GRXCR1A8MXD5 290 aa21.8■■□□□ 1.08
SHKBP1-222ENST00000600320 KIAA0391O15091 583 aaKnown RBP21.8■■□□□ 1.08
SHKBP1-222ENST00000600320 OFD1O75665 1012 aa21.8■■□□□ 1.08
SHKBP1-222ENST00000600320 DGKIO75912 1065 aa21.8■■□□□ 1.08
SHKBP1-222ENST00000600320 ADRB2P07550 413 aa21.8■■□□□ 1.08
SHKBP1-222ENST00000600320 NR2F2P24468 414 aa21.8■■□□□ 1.08
SHKBP1-222ENST00000600320 LRRC63Q05C16 580 aa21.8■■□□□ 1.08
SHKBP1-222ENST00000600320 MYBPC2Q14324 1141 aa21.8■■□□□ 1.08
SHKBP1-222ENST00000600320 ENOX2Q16206 610 aaKnown RBP21.8■■□□□ 1.08
SHKBP1-222ENST00000600320 SLC10A6Q3KNW5 377 aa21.8■■□□□ 1.08
SHKBP1-222ENST00000600320 LRRC55Q6ZSA7 311 aa21.8■■□□□ 1.08
SHKBP1-222ENST00000600320 HACE1Q8IYU2 909 aa21.8■■□□□ 1.08
SHKBP1-222ENST00000600320 PHOSPHO2Q8TCD6 241 aa21.8■■□□□ 1.08
SHKBP1-222ENST00000600320 HELQQ8TDG4 1101 aa21.8■■□□□ 1.08
SHKBP1-222ENST00000600320 TMEM174Q8WUU8 243 aa21.8■■□□□ 1.08
SHKBP1-222ENST00000600320 EEF2KMTQ96G04 330 aa21.8■■□□□ 1.08
SHKBP1-222ENST00000600320 MIOSQ9NXC5 875 aa21.8■■□□□ 1.08
SHKBP1-222ENST00000600320 DACH1Q9UI36 760 aa21.8■■□□□ 1.08
SHKBP1-222ENST00000600320 RWDD2AQ9UIY3 292 aa21.8■■□□□ 1.08
SHKBP1-222ENST00000600320 GIT1Q9Y2X7 761 aa21.8■■□□□ 1.08
SHKBP1-222ENST00000600320 EXOC3O60645 756 aa21.79■■□□□ 1.08
SHKBP1-222ENST00000600320 GJB5O95377 273 aa21.79■■□□□ 1.08
SHKBP1-222ENST00000600320 LDHAP00338 332 aaKnown RBP21.79■■□□□ 1.08
SHKBP1-222ENST00000600320 CCDC192P0DO97 292 aa21.79■■□□□ 1.08
SHKBP1-222ENST00000600320 MLH1P40692 756 aa21.79■■□□□ 1.08
SHKBP1-222ENST00000600320 ADAM9Q13443 819 aa21.79■■□□□ 1.08
SHKBP1-222ENST00000600320 KYAT1Q16773 422 aa21.79■■□□□ 1.08
SHKBP1-222ENST00000600320 FOXR2Q6PJQ5 311 aa21.79■■□□□ 1.08
SHKBP1-222ENST00000600320 TDHQ8IZJ6 230 aa21.79■■□□□ 1.08
SHKBP1-222ENST00000600320 RDH13Q8NBN7 331 aa21.79■■□□□ 1.08
SHKBP1-222ENST00000600320 GSTCDQ8NEC7 633 aa21.79■■□□□ 1.08
SHKBP1-222ENST00000600320 SNX27Q96L92 541 aa21.79■■□□□ 1.08
SHKBP1-222ENST00000600320 ZFP42Q96MM3 310 aa21.79■■□□□ 1.08
SHKBP1-222ENST00000600320 RPF1Q9H9Y2 349 aaKnown RBP21.79■■□□□ 1.08
SHKBP1-222ENST00000600320 RC3H2Q9HBD1 1191 aaKnown RBP21.79■■□□□ 1.08
SHKBP1-222ENST00000600320 INPP5FQ9Y2H2 1132 aa21.79■■□□□ 1.08
SHKBP1-222ENST00000600320 BICDL2A1A5D9 508 aa21.78■■□□□ 1.08
SHKBP1-222ENST00000600320 ERCC5P28715 1186 aaPredicted RBP21.78■■□□□ 1.08
SHKBP1-222ENST00000600320 RABGGTBP53611 331 aa21.78■■□□□ 1.08
SHKBP1-222ENST00000600320 ANO6Q4KMQ2 910 aa21.78■■□□□ 1.08
SHKBP1-222ENST00000600320 XKR4Q5GH76 650 aa21.78■■□□□ 1.08
SHKBP1-222ENST00000600320 CEP135Q66GS9 1140 aa21.78■■□□□ 1.08
SHKBP1-222ENST00000600320 BRSK2Q8IWQ3 736 aa21.78■■□□□ 1.08
SHKBP1-222ENST00000600320 ZNF689Q96CS4 500 aaPredicted RBP21.78■■□□□ 1.08
SHKBP1-222ENST00000600320 CASD1Q96PB1 797 aa21.78■■□□□ 1.08
SHKBP1-222ENST00000600320 TTC26A0AVF1 554 aa21.77■■□□□ 1.08
SHKBP1-222ENST00000600320 ARL5CA6NH57 179 aa21.77■■□□□ 1.08
SHKBP1-222ENST00000600320 LACTBL1A8MY62 500 aa21.77■■□□□ 1.08
SHKBP1-222ENST00000600320 PTGESO14684 152 aa21.77■■□□□ 1.08
SHKBP1-222ENST00000600320 AKAP3O75969 853 aa21.77■■□□□ 1.08
SHKBP1-222ENST00000600320 RPL13P26373 211 aaKnown RBP21.77■■□□□ 1.08
SHKBP1-222ENST00000600320 YARSP54577 528 aaKnown RBP21.77■■□□□ 1.08
SHKBP1-222ENST00000600320 HTRA4P83105 476 aaPredicted RBP21.77■■□□□ 1.08
SHKBP1-222ENST00000600320 FKBP3Q00688 224 aaKnown RBP21.77■■□□□ 1.08
SHKBP1-222ENST00000600320 SNRNP35Q16560 246 aaKnown RBP21.77■■□□□ 1.08
SHKBP1-222ENST00000600320 PAN2Q504Q3 1202 aaKnown RBP21.77■■□□□ 1.08
SHKBP1-222ENST00000600320 CT47A1Q5JQC4 288 aaPredicted RBP21.77■■□□□ 1.08
SHKBP1-222ENST00000600320 GLB1LQ6UWU2 654 aa21.77■■□□□ 1.08
SHKBP1-222ENST00000600320 ALKAL1Q6UXT8 129 aa21.77■■□□□ 1.08
SHKBP1-222ENST00000600320 TMEM117Q9H0C3 514 aa21.77■■□□□ 1.08
SHKBP1-222ENST00000600320 UBN1Q9NPG3 1134 aa21.77■■□□□ 1.08
SHKBP1-222ENST00000600320 RNF216Q9NWF9 866 aaPredicted RBP21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms