RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 PCDHA7Q9UN72 937 aa17.76■□□□□ 0.43
LSM4-206ENST00000600289 FRMD3A2A2Y4 597 aa17.75■□□□□ 0.43
LSM4-206ENST00000600289 FSCN2O14926 492 aa17.75■□□□□ 0.43
LSM4-206ENST00000600289 TRAK2O60296 914 aa17.75■□□□□ 0.43
LSM4-206ENST00000600289 GFRA3O60609 400 aa17.75■□□□□ 0.43
LSM4-206ENST00000600289 ZC3H11AO75152 810 aaKnown RBP eCLIP17.75■□□□□ 0.43
LSM4-206ENST00000600289 GALTP07902 379 aa17.75■□□□□ 0.43
LSM4-206ENST00000600289 LIG1P18858 919 aa17.75■□□□□ 0.43
LSM4-206ENST00000600289 RNASELQ05823 741 aaKnown RBP17.75■□□□□ 0.43
LSM4-206ENST00000600289 GRIK3Q13003 919 aa17.75■□□□□ 0.43
LSM4-206ENST00000600289 FOXD4L6Q3SYB3 417 aaPredicted RBP17.75■□□□□ 0.43
LSM4-206ENST00000600289 RESP18Q5W5W9 173 aa17.75■□□□□ 0.43
LSM4-206ENST00000600289 FOXD4L3Q6VB84 417 aaPredicted RBP17.75■□□□□ 0.43
LSM4-206ENST00000600289 HAUS6Q7Z4H7 955 aa17.75■□□□□ 0.43
LSM4-206ENST00000600289 MYCT1Q8N699 235 aa17.75■□□□□ 0.43
LSM4-206ENST00000600289 DDX12PQ92771 950 aa17.75■□□□□ 0.43
LSM4-206ENST00000600289 ZFP42Q96MM3 310 aa17.75■□□□□ 0.43
LSM4-206ENST00000600289 MAGEF1Q9HAY2 307 aa17.75■□□□□ 0.43
LSM4-206ENST00000600289 SEL1LQ9UBV2 794 aa17.75■□□□□ 0.43
LSM4-206ENST00000600289 STK39Q9UEW8 545 aa17.75■□□□□ 0.43
LSM4-206ENST00000600289 PUF60Q9UHX1 559 aaKnown RBP17.75■□□□□ 0.43
LSM4-206ENST00000600289 ANK1P16157 1881 aa17.75■□□□□ 0.43
LSM4-206ENST00000600289 MYMKA6NI61 221 aa17.74■□□□□ 0.43
LSM4-206ENST00000600289 NCK2O43639 380 aa17.74■□□□□ 0.43
LSM4-206ENST00000600289 B4GALT3O60512 393 aa17.74■□□□□ 0.43
LSM4-206ENST00000600289 DDHD2O94830 711 aa17.74■□□□□ 0.43
LSM4-206ENST00000600289 PIGRP01833 764 aa17.74■□□□□ 0.43
LSM4-206ENST00000600289 MCF2P10911 925 aa17.74■□□□□ 0.43
LSM4-206ENST00000600289 GAP43P17677 238 aa17.74■□□□□ 0.43
LSM4-206ENST00000600289 AKAP5P24588 427 aa17.74■□□□□ 0.43
LSM4-206ENST00000600289 PBX3P40426 434 aa17.74■□□□□ 0.43
LSM4-206ENST00000600289 GRM5P41594 1212 aa17.74■□□□□ 0.43
LSM4-206ENST00000600289 ME1P48163 572 aa17.74■□□□□ 0.43
LSM4-206ENST00000600289 GTF2BQ00403 316 aa17.74■□□□□ 0.43
LSM4-206ENST00000600289 KRT17Q04695 432 aa17.74■□□□□ 0.43
LSM4-206ENST00000600289 TCEAL5Q5H9L2 206 aa17.74■□□□□ 0.43
LSM4-206ENST00000600289 MPZL3Q6UWV2 235 aa17.74■□□□□ 0.43
LSM4-206ENST00000600289 ZNF280BQ86YH2 543 aa17.74■□□□□ 0.43
LSM4-206ENST00000600289 COLGALT2Q8IYK4 626 aa17.74■□□□□ 0.43
LSM4-206ENST00000600289 IQUBQ8NA54 791 aa17.74■□□□□ 0.43
LSM4-206ENST00000600289 IGSF21Q96ID5 467 aa17.74■□□□□ 0.43
LSM4-206ENST00000600289 PYM1Q9BRP8 204 aaKnown RBP17.74■□□□□ 0.43
LSM4-206ENST00000600289 TARS2Q9BW92 718 aaKnown RBP17.74■□□□□ 0.43
LSM4-206ENST00000600289 APOL6Q9BWW8 343 aa17.74■□□□□ 0.43
LSM4-206ENST00000600289 LRRC27Q9C0I9 530 aa17.74■□□□□ 0.43
LSM4-206ENST00000600289 CDT1Q9H211 546 aa17.74■□□□□ 0.43
LSM4-206ENST00000600289 KBTBD4Q9NVX7 518 aa17.74■□□□□ 0.43
LSM4-206ENST00000600289 SNTG2Q9NY99 539 aa17.74■□□□□ 0.43
LSM4-206ENST00000600289 DNAJB4Q9UDY4 337 aa17.74■□□□□ 0.43
LSM4-206ENST00000600289 USP20Q9Y2K6 914 aa17.74■□□□□ 0.43
LSM4-206ENST00000600289 CACNA1HO95180 2353 aa17.74■□□□□ 0.43
LSM4-206ENST00000600289 VPS13AQ96RL7 3174 aa17.73■□□□□ 0.43
LSM4-206ENST00000600289 FSD2A1L4K1 749 aa17.73■□□□□ 0.43
LSM4-206ENST00000600289 K7ENM7 598 aa17.73■□□□□ 0.43
LSM4-206ENST00000600289 TOM1L1O75674 476 aa17.73■□□□□ 0.43
LSM4-206ENST00000600289 RECQL4O94761 1208 aa17.73■□□□□ 0.43
LSM4-206ENST00000600289 POMCP01189 267 aa17.73■□□□□ 0.43
LSM4-206ENST00000600289 IRS1P35568 1242 aa17.73■□□□□ 0.43
LSM4-206ENST00000600289 SLC11A1P49279 550 aa17.73■□□□□ 0.43
LSM4-206ENST00000600289 SCNN1GP51170 649 aa17.73■□□□□ 0.43
LSM4-206ENST00000600289 NUCB2P80303 420 aa17.73■□□□□ 0.43
LSM4-206ENST00000600289 PUS10Q3MIT2 529 aaKnown RBP17.73■□□□□ 0.43
LSM4-206ENST00000600289 ZNF568Q3ZCX4 644 aa17.73■□□□□ 0.43
LSM4-206ENST00000600289 CNNM4Q6P4Q7 775 aa17.73■□□□□ 0.43
LSM4-206ENST00000600289 PDILTQ8N807 584 aa17.73■□□□□ 0.43
LSM4-206ENST00000600289 LEO1Q8WVC0 666 aaPredicted RBP17.73■□□□□ 0.43
LSM4-206ENST00000600289 PPP2R3CQ969Q6 453 aa17.73■□□□□ 0.43
LSM4-206ENST00000600289 HVCN1Q96D96 273 aa17.73■□□□□ 0.43
LSM4-206ENST00000600289 TMEM169Q96HH4 297 aa17.73■□□□□ 0.43
LSM4-206ENST00000600289 FAM193BQ96PV7 902 aaPredicted RBP17.73■□□□□ 0.43
LSM4-206ENST00000600289 SCAND2PQ9GZW5 306 aaPredicted RBP17.73■□□□□ 0.43
LSM4-206ENST00000600289 NGRNQ9NPE2 291 aaKnown RBP17.73■□□□□ 0.43
LSM4-206ENST00000600289 OLFML3Q9NRN5 406 aa17.73■□□□□ 0.43
LSM4-206ENST00000600289 MIOSQ9NXC5 875 aa17.73■□□□□ 0.43
LSM4-206ENST00000600289 FAM13BQ9NYF5 915 aa17.73■□□□□ 0.43
LSM4-206ENST00000600289 TBX20Q9UMR3 447 aa17.73■□□□□ 0.43
LSM4-206ENST00000600289 H3BQ06 376 aaPredicted RBP17.72■□□□□ 0.43
LSM4-206ENST00000600289 CTC1Q2NKJ3 1217 aa17.72■□□□□ 0.43
LSM4-206ENST00000600289 XKR4Q5GH76 650 aa17.72■□□□□ 0.43
LSM4-206ENST00000600289 ADALQ6DHV7 355 aa17.72■□□□□ 0.43
LSM4-206ENST00000600289 DYMQ7RTS9 669 aa17.72■□□□□ 0.43
LSM4-206ENST00000600289 DDX53Q86TM3 631 aaKnown RBP17.72■□□□□ 0.43
LSM4-206ENST00000600289 TMEM173Q86WV6 379 aaPredicted RBP17.72■□□□□ 0.43
LSM4-206ENST00000600289 MAP4K3Q8IVH8 894 aa17.72■□□□□ 0.43
LSM4-206ENST00000600289 PABPC5Q96DU9 382 aaKnown RBP17.72■□□□□ 0.43
LSM4-206ENST00000600289 SPATA32Q96LK8 384 aa17.72■□□□□ 0.43
LSM4-206ENST00000600289 RPS6KC1Q96S38 1066 aa17.72■□□□□ 0.43
LSM4-206ENST00000600289 STRA6Q9BX79 667 aa17.72■□□□□ 0.43
LSM4-206ENST00000600289 PANK2Q9BZ23 570 aa17.72■□□□□ 0.43
LSM4-206ENST00000600289 GBP3Q9H0R5 595 aa17.72■□□□□ 0.43
LSM4-206ENST00000600289 PRKAG3Q9UGI9 489 aa17.72■□□□□ 0.43
LSM4-206ENST00000600289 PARP2Q9UGN5 583 aa17.72■□□□□ 0.43
LSM4-206ENST00000600289 MYO7AQ13402 2215 aa17.71■□□□□ 0.43
LSM4-206ENST00000600289 PTGESO14684 152 aa17.71■□□□□ 0.43
LSM4-206ENST00000600289 NRP1O14786 923 aa17.71■□□□□ 0.43
LSM4-206ENST00000600289 PPP1R37O75864 691 aa17.71■□□□□ 0.43
LSM4-206ENST00000600289 EFEMP2O95967 443 aa17.71■□□□□ 0.43
LSM4-206ENST00000600289 ALDH2P05091 517 aa17.71■□□□□ 0.43
LSM4-206ENST00000600289 ERVFC1P60507 584 aa17.71■□□□□ 0.43
LSM4-206ENST00000600289 MCL1Q07820 350 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms