RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 ARMCX5Q6P1M9 558 aa18.06■□□□□ 0.48
SHKBP1-219ENST00000599575 FOXR2Q6PJQ5 311 aa18.06■□□□□ 0.48
SHKBP1-219ENST00000599575 TMCO2Q7Z6W1 182 aaPredicted RBP18.06■□□□□ 0.48
SHKBP1-219ENST00000599575 ZBTB33Q86T24 672 aa18.06■□□□□ 0.48
SHKBP1-219ENST00000599575 SLC9A9Q8IVB4 645 aa18.06■□□□□ 0.48
SHKBP1-219ENST00000599575 HELQQ8TDG4 1101 aa18.06■□□□□ 0.48
SHKBP1-219ENST00000599575 LPPQ93052 612 aa18.06■□□□□ 0.48
SHKBP1-219ENST00000599575 SYAP1Q96A49 352 aaPredicted RBP18.06■□□□□ 0.48
SHKBP1-219ENST00000599575 RPS6KC1Q96S38 1066 aa18.06■□□□□ 0.48
SHKBP1-219ENST00000599575 PLVAPQ9BX97 442 aa18.06■□□□□ 0.48
SHKBP1-219ENST00000599575 RNF39Q9H2S5 420 aa18.06■□□□□ 0.48
SHKBP1-219ENST00000599575 AGPAT3Q9NRZ7 376 aa18.06■□□□□ 0.48
SHKBP1-219ENST00000599575 SNTG2Q9NY99 539 aa18.06■□□□□ 0.48
SHKBP1-219ENST00000599575 TRAF3IP3Q9Y228 551 aa18.06■□□□□ 0.48
SHKBP1-219ENST00000599575 HES2Q9Y543 173 aa18.06■□□□□ 0.48
SHKBP1-219ENST00000599575 TGFB1I1O43294 461 aa18.05■□□□□ 0.48
SHKBP1-219ENST00000599575 CALUO43852 315 aaPredicted RBP18.05■□□□□ 0.48
SHKBP1-219ENST00000599575 RB1P06400 928 aa18.05■□□□□ 0.48
SHKBP1-219ENST00000599575 ADRB2P07550 413 aa18.05■□□□□ 0.48
SHKBP1-219ENST00000599575 GRIK3Q13003 919 aa18.05■□□□□ 0.48
SHKBP1-219ENST00000599575 PPP2R2DQ66LE6 453 aa18.05■□□□□ 0.48
SHKBP1-219ENST00000599575 ALKAL1Q6UXT8 129 aa18.05■□□□□ 0.48
SHKBP1-219ENST00000599575 THNSL1Q8IYQ7 743 aa18.05■□□□□ 0.48
SHKBP1-219ENST00000599575 DHTKD1Q96HY7 919 aaPredicted RBP18.05■□□□□ 0.48
SHKBP1-219ENST00000599575 TGS1Q96RS0 853 aaKnown RBP18.05■□□□□ 0.48
SHKBP1-219ENST00000599575 KCTD10Q9H3F6 313 aa18.05■□□□□ 0.48
SHKBP1-219ENST00000599575 ASB7Q9H672 318 aa18.05■□□□□ 0.48
SHKBP1-219ENST00000599575 SLC38A7Q9NVC3 462 aa18.05■□□□□ 0.48
SHKBP1-219ENST00000599575 STK39Q9UEW8 545 aa18.05■□□□□ 0.48
SHKBP1-219ENST00000599575 CPSF3Q9UKF6 684 aaKnown RBP18.05■□□□□ 0.48
SHKBP1-219ENST00000599575 MAN1B1Q9UKM7 699 aa18.05■□□□□ 0.48
SHKBP1-219ENST00000599575 YBX2Q9Y2T7 364 aaKnown RBP18.05■□□□□ 0.48
SHKBP1-219ENST00000599575 LINC01553A4QN01 128 aa18.04■□□□□ 0.48
SHKBP1-219ENST00000599575 PSMA7O14818 248 aa18.04■□□□□ 0.48
SHKBP1-219ENST00000599575 EXTL3O43909 919 aa18.04■□□□□ 0.48
SHKBP1-219ENST00000599575 KCNE1P15382 129 aa18.04■□□□□ 0.48
SHKBP1-219ENST00000599575 LAG3P18627 525 aa18.04■□□□□ 0.48
SHKBP1-219ENST00000599575 IBSPP21815 317 aaPredicted RBP18.04■□□□□ 0.48
SHKBP1-219ENST00000599575 AKAP5P24588 427 aa18.04■□□□□ 0.48
SHKBP1-219ENST00000599575 RPL13P26373 211 aaKnown RBP18.04■□□□□ 0.48
SHKBP1-219ENST00000599575 PBX2P40425 430 aa18.04■□□□□ 0.48
SHKBP1-219ENST00000599575 MLH1P40692 756 aa18.04■□□□□ 0.48
SHKBP1-219ENST00000599575 ERVK-21P61565 698 aa18.04■□□□□ 0.48
SHKBP1-219ENST00000599575 RNASELQ05823 741 aaKnown RBP18.04■□□□□ 0.48
SHKBP1-219ENST00000599575 KLHL40Q2TBA0 621 aa18.04■□□□□ 0.48
SHKBP1-219ENST00000599575 EDRF1Q3B7T1 1238 aa18.04■□□□□ 0.48
SHKBP1-219ENST00000599575 CT47A1Q5JQC4 288 aaPredicted RBP18.04■□□□□ 0.48
SHKBP1-219ENST00000599575 RBM43Q6ZSC3 357 aaKnown RBP18.04■□□□□ 0.48
SHKBP1-219ENST00000599575 NT5DC4Q86YG4 428 aa18.04■□□□□ 0.48
SHKBP1-219ENST00000599575 NELFCDQ8IXH7 590 aa18.04■□□□□ 0.48
SHKBP1-219ENST00000599575 ADSSL1Q8N142 457 aa18.04■□□□□ 0.48
SHKBP1-219ENST00000599575 FBXL18Q96ME1 805 aa18.04■□□□□ 0.48
SHKBP1-219ENST00000599575 GAD1Q99259 594 aa18.04■□□□□ 0.48
SHKBP1-219ENST00000599575 TMEM175Q9BSA9 504 aa18.04■□□□□ 0.48
SHKBP1-219ENST00000599575 APOL6Q9BWW8 343 aa18.04■□□□□ 0.48
SHKBP1-219ENST00000599575 HAPLN2Q9GZV7 340 aa18.04■□□□□ 0.48
SHKBP1-219ENST00000599575 RPF1Q9H9Y2 349 aaKnown RBP18.04■□□□□ 0.48
SHKBP1-219ENST00000599575 TBC1D13Q9NVG8 400 aa18.04■□□□□ 0.48
SHKBP1-219ENST00000599575 CNTN3Q9P232 1028 aa18.04■□□□□ 0.48
SHKBP1-219ENST00000599575 GDAQ9Y2T3 454 aa18.04■□□□□ 0.48
SHKBP1-219ENST00000599575 MEIS3P2A8K0S8 358 aa18.03■□□□□ 0.48
SHKBP1-219ENST00000599575 C5orf67F2Z3F1 127 aa18.03■□□□□ 0.48
SHKBP1-219ENST00000599575 IL18RAPO95256 599 aa18.03■□□□□ 0.48
SHKBP1-219ENST00000599575 THP07101 528 aa18.03■□□□□ 0.48
SHKBP1-219ENST00000599575 HARSP12081 509 aaKnown RBP18.03■□□□□ 0.48
SHKBP1-219ENST00000599575 PPM1AP35813 382 aa18.03■□□□□ 0.48
SHKBP1-219ENST00000599575 TAP1Q03518 808 aa18.03■□□□□ 0.48
SHKBP1-219ENST00000599575 LRRC63Q05C16 580 aa18.03■□□□□ 0.48
SHKBP1-219ENST00000599575 SURF1Q15526 300 aa18.03■□□□□ 0.48
SHKBP1-219ENST00000599575 CCDC183Q5T5S1 534 aa18.03■□□□□ 0.48
SHKBP1-219ENST00000599575 CENPPQ6IPU0 288 aa18.03■□□□□ 0.48
SHKBP1-219ENST00000599575 GPD1LQ8N335 351 aa18.03■□□□□ 0.48
SHKBP1-219ENST00000599575 CEP120Q8N960 986 aa18.03■□□□□ 0.48
SHKBP1-219ENST00000599575 MLKLQ8NB16 471 aa18.03■□□□□ 0.48
SHKBP1-219ENST00000599575 XXYLT1Q8NBI6 393 aa18.03■□□□□ 0.48
SHKBP1-219ENST00000599575 GSTCDQ8NEC7 633 aa18.03■□□□□ 0.48
SHKBP1-219ENST00000599575 P2RX5Q93086 422 aa18.03■□□□□ 0.48
SHKBP1-219ENST00000599575 SNX27Q96L92 541 aa18.03■□□□□ 0.48
SHKBP1-219ENST00000599575 FAM193BQ96PV7 902 aaPredicted RBP18.03■□□□□ 0.48
SHKBP1-219ENST00000599575 CBWD1Q9BRT8 395 aa18.03■□□□□ 0.48
SHKBP1-219ENST00000599575 HSPBP1Q9NZL4 362 aa18.03■□□□□ 0.48
SHKBP1-219ENST00000599575 DERAQ9Y315 318 aa18.03■□□□□ 0.48
SHKBP1-219ENST00000599575 PCDHB12Q9Y5F1 795 aa18.03■□□□□ 0.48
SHKBP1-219ENST00000599575 TTC26A0AVF1 554 aa18.02■□□□□ 0.48
SHKBP1-219ENST00000599575 LCHNA4D1U4 455 aa18.02■□□□□ 0.48
SHKBP1-219ENST00000599575 ZNF233A6NK53 670 aa18.02■□□□□ 0.48
SHKBP1-219ENST00000599575 XPOTO43592 962 aaKnown RBP18.02■□□□□ 0.48
SHKBP1-219ENST00000599575 BMPR1AP36894 532 aa18.02■□□□□ 0.48
SHKBP1-219ENST00000599575 PRCPP42785 496 aa18.02■□□□□ 0.48
SHKBP1-219ENST00000599575 ALDH7A1P49419 539 aaKnown RBP18.02■□□□□ 0.48
SHKBP1-219ENST00000599575 PPP2R3AQ06190 1150 aa18.02■□□□□ 0.48
SHKBP1-219ENST00000599575 SLC10A6Q3KNW5 377 aa18.02■□□□□ 0.48
SHKBP1-219ENST00000599575 ERCC4Q92889 916 aaPredicted RBP18.02■□□□□ 0.48
SHKBP1-219ENST00000599575 ZFP42Q96MM3 310 aa18.02■□□□□ 0.48
SHKBP1-219ENST00000599575 TSG101Q99816 390 aa18.02■□□□□ 0.48
SHKBP1-219ENST00000599575 NKX2-4Q9H2Z4 354 aa18.02■□□□□ 0.48
SHKBP1-219ENST00000599575 DMAC2Q9NW81 257 aa18.02■□□□□ 0.48
SHKBP1-219ENST00000599575 DACH1Q9UI36 760 aa18.02■□□□□ 0.48
SHKBP1-219ENST00000599575 INPP5FQ9Y2H2 1132 aa18.02■□□□□ 0.48
SHKBP1-219ENST00000599575 MRPL42Q9Y6G3 142 aaKnown RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms