RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 DRC1Q96MC2 740 aa13.37□□□□□ -0.27
LIG1-217ENST00000599165 CLIC6Q96NY7 704 aa13.37□□□□□ -0.27
LIG1-217ENST00000599165 KLHL5Q96PQ7 755 aa13.37□□□□□ -0.27
LIG1-217ENST00000599165 FAM193BQ96PV7 902 aaPredicted RBP13.37□□□□□ -0.27
LIG1-217ENST00000599165 FIZ1Q96SL8 496 aa13.37□□□□□ -0.27
LIG1-217ENST00000599165 REEP2Q9BRK0 252 aa13.37□□□□□ -0.27
LIG1-217ENST00000599165 HERC2P3Q9BVR0 1158 aa13.37□□□□□ -0.27
LIG1-217ENST00000599165 TARS2Q9BW92 718 aaKnown RBP13.37□□□□□ -0.27
LIG1-217ENST00000599165 APOL5Q9BWW9 433 aa13.37□□□□□ -0.27
LIG1-217ENST00000599165 GPR62Q9BZJ7 368 aa13.37□□□□□ -0.27
LIG1-217ENST00000599165 CCSER1Q9C0I3 900 aa13.37□□□□□ -0.27
LIG1-217ENST00000599165 HAPLN2Q9GZV7 340 aa13.37□□□□□ -0.27
LIG1-217ENST00000599165 C17orf75Q9HAS0 396 aa13.37□□□□□ -0.27
LIG1-217ENST00000599165 KMT5AQ9NQR1 393 aa13.37□□□□□ -0.27
LIG1-217ENST00000599165 CHST7Q9NS84 486 aa13.37□□□□□ -0.27
LIG1-217ENST00000599165 DOCK6Q96HP0 2047 aa13.37□□□□□ -0.27
LIG1-217ENST00000599165 CARNS1A5YM72 827 aa13.36□□□□□ -0.27
LIG1-217ENST00000599165 PI4K2BG5E9Z4 385 aa13.36□□□□□ -0.27
LIG1-217ENST00000599165 STX6O43752 255 aa13.36□□□□□ -0.27
LIG1-217ENST00000599165 BRD1O95696 1058 aa13.36□□□□□ -0.27
LIG1-217ENST00000599165 MAPTP10636 758 aaKnown RBP13.36□□□□□ -0.27
LIG1-217ENST00000599165 ZNF131P52739 623 aa13.36□□□□□ -0.27
LIG1-217ENST00000599165 MCM6Q14566 821 aa13.36□□□□□ -0.27
LIG1-217ENST00000599165 DCAF4L1Q3SXM0 396 aa13.36□□□□□ -0.27
LIG1-217ENST00000599165 CD300LGQ6UXG3 332 aa13.36□□□□□ -0.27
LIG1-217ENST00000599165 ALKAL1Q6UXT8 129 aa13.36□□□□□ -0.27
LIG1-217ENST00000599165 RAD54LQ92698 747 aa13.36□□□□□ -0.27
LIG1-217ENST00000599165 ZBTB45Q96K62 511 aaPredicted RBP13.36□□□□□ -0.27
LIG1-217ENST00000599165 TIPINQ9BVW5 301 aa13.36□□□□□ -0.27
LIG1-217ENST00000599165 GDAQ9Y2T3 454 aa13.36□□□□□ -0.27
LIG1-217ENST00000599165 SRPRBQ9Y5M8 271 aaKnown RBP13.36□□□□□ -0.27
LIG1-217ENST00000599165 MORC2Q9Y6X9 1032 aaPredicted RBP13.36□□□□□ -0.27
LIG1-217ENST00000599165 MYO10Q9HD67 2058 aa13.36□□□□□ -0.27
LIG1-217ENST00000599165 ANK1P16157 1881 aa13.36□□□□□ -0.27
LIG1-217ENST00000599165 A0A087X0B3 334 aa13.35□□□□□ -0.27
LIG1-217ENST00000599165 FSD2A1L4K1 749 aa13.35□□□□□ -0.27
LIG1-217ENST00000599165 CASTOR2A6NHX0 329 aa13.35□□□□□ -0.27
LIG1-217ENST00000599165 LOC730098B7Z3J9 87 aa13.35□□□□□ -0.27
LIG1-217ENST00000599165 KIF4AO95239 1232 aa13.35□□□□□ -0.27
LIG1-217ENST00000599165 UBA7P41226 1012 aa13.35□□□□□ -0.27
LIG1-217ENST00000599165 CLCN4P51793 760 aa13.35□□□□□ -0.27
LIG1-217ENST00000599165 NCKAP1LP55160 1127 aa13.35□□□□□ -0.27
LIG1-217ENST00000599165 CEBPZQ03701 1054 aaKnown RBP13.35□□□□□ -0.27
LIG1-217ENST00000599165 SOX4Q06945 474 aaPredicted RBP13.35□□□□□ -0.27
LIG1-217ENST00000599165 TUSC3Q13454 348 aa13.35□□□□□ -0.27
LIG1-217ENST00000599165 GIT2Q14161 759 aa13.35□□□□□ -0.27
LIG1-217ENST00000599165 CBX2Q14781 532 aaPredicted RBP13.35□□□□□ -0.27
LIG1-217ENST00000599165 XKR4Q5GH76 650 aa13.35□□□□□ -0.27
LIG1-217ENST00000599165 GLRA4Q5JXX5 417 aa13.35□□□□□ -0.27
LIG1-217ENST00000599165 FUT10Q6P4F1 479 aa13.35□□□□□ -0.27
LIG1-217ENST00000599165 GPBP1Q86WP2 473 aa13.35□□□□□ -0.27
LIG1-217ENST00000599165 HACE1Q8IYU2 909 aa13.35□□□□□ -0.27
LIG1-217ENST00000599165 C12orf76Q8N812 135 aaPredicted RBP13.35□□□□□ -0.27
LIG1-217ENST00000599165 CASP10Q92851 521 aa13.35□□□□□ -0.27
LIG1-217ENST00000599165 CDK5RAP3Q96JB5 506 aa13.35□□□□□ -0.27
LIG1-217ENST00000599165 PPP1R10Q96QC0 940 aaKnown RBP13.35□□□□□ -0.27
LIG1-217ENST00000599165 MRPL4Q9BYD3 311 aaKnown RBP13.35□□□□□ -0.27
LIG1-217ENST00000599165 RXFP1Q9HBX9 757 aa13.35□□□□□ -0.27
LIG1-217ENST00000599165 KCND2Q9NZV8 630 aa13.35□□□□□ -0.27
LIG1-217ENST00000599165 FAM50BQ9Y247 325 aa13.35□□□□□ -0.27
LIG1-217ENST00000599165 RBM19Q9Y4C8 960 aaKnown RBP13.35□□□□□ -0.27
LIG1-217ENST00000599165 TRIOO75962 3097 aa13.34□□□□□ -0.27
LIG1-217ENST00000599165 TEX28O15482 410 aa13.34□□□□□ -0.27
LIG1-217ENST00000599165 WEE2P0C1S8 567 aa13.34□□□□□ -0.27
LIG1-217ENST00000599165 SSTR3P32745 418 aaPredicted RBP13.34□□□□□ -0.27
LIG1-217ENST00000599165 GRM5P41594 1212 aa13.34□□□□□ -0.27
LIG1-217ENST00000599165 NASPP49321 788 aaPredicted RBP13.34□□□□□ -0.27
LIG1-217ENST00000599165 DSG1Q02413 1049 aa13.34□□□□□ -0.27
LIG1-217ENST00000599165 PKP1Q13835 747 aa13.34□□□□□ -0.27
LIG1-217ENST00000599165 HSP90AA2PQ14568 343 aaPredicted RBP13.34□□□□□ -0.27
LIG1-217ENST00000599165 SLC39A14Q15043 492 aa13.34□□□□□ -0.27
LIG1-217ENST00000599165 ZNF568Q3ZCX4 644 aa13.34□□□□□ -0.27
LIG1-217ENST00000599165 RTP2Q5QGT7 225 aa13.34□□□□□ -0.27
LIG1-217ENST00000599165 TMEM130Q8N3G9 435 aa13.34□□□□□ -0.27
LIG1-217ENST00000599165 CALML4Q96GE6 196 aa13.34□□□□□ -0.27
LIG1-217ENST00000599165 ZMAT2Q96NC0 199 aaKnown RBP13.34□□□□□ -0.27
LIG1-217ENST00000599165 RPS6KC1Q96S38 1066 aa13.34□□□□□ -0.27
LIG1-217ENST00000599165 ADPGKQ9BRR6 497 aa13.34□□□□□ -0.27
LIG1-217ENST00000599165 ADAM28Q9UKQ2 775 aa13.34□□□□□ -0.27
LIG1-217ENST00000599165 ODF2LQ9ULJ1 636 aa13.34□□□□□ -0.27
LIG1-217ENST00000599165 DOCK8Q8NF50 2099 aa13.34□□□□□ -0.27
LIG1-217ENST00000599165 C2CD2LO14523 706 aa13.33□□□□□ -0.28
LIG1-217ENST00000599165 FAM189A1O60320 539 aa13.33□□□□□ -0.28
LIG1-217ENST00000599165 MCF2P10911 925 aa13.33□□□□□ -0.28
LIG1-217ENST00000599165 HOXB8P17481 243 aaPredicted RBP13.33□□□□□ -0.28
LIG1-217ENST00000599165 CA8P35219 290 aa13.33□□□□□ -0.28
LIG1-217ENST00000599165 GLUD2P49448 558 aa13.33□□□□□ -0.28
LIG1-217ENST00000599165 DHX8Q14562 1220 aaKnown RBP13.33□□□□□ -0.28
LIG1-217ENST00000599165 TMEM132AQ24JP5 1023 aa13.33□□□□□ -0.28
LIG1-217ENST00000599165 SEZ6Q53EL9 994 aa13.33□□□□□ -0.28
LIG1-217ENST00000599165 MPZL3Q6UWV2 235 aa13.33□□□□□ -0.28
LIG1-217ENST00000599165 ZBTB33Q86T24 672 aa13.33□□□□□ -0.28
LIG1-217ENST00000599165 RNF135Q8IUD6 432 aa13.33□□□□□ -0.28
LIG1-217ENST00000599165 C3orf58Q8NDZ4 430 aa13.33□□□□□ -0.28
LIG1-217ENST00000599165 HASPINQ8TF76 798 aa13.33□□□□□ -0.28
LIG1-217ENST00000599165 LARP4BQ92615 738 aaKnown RBP13.33□□□□□ -0.28
LIG1-217ENST00000599165 SNX27Q96L92 541 aa13.33□□□□□ -0.28
LIG1-217ENST00000599165 COLEC11Q9BWP8 271 aa13.33□□□□□ -0.28
LIG1-217ENST00000599165 PHF7Q9BWX1 381 aaPredicted RBP13.33□□□□□ -0.28
LIG1-217ENST00000599165 ADAM7Q9H2U9 754 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms